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FFCP PHASE1:Mm9::chr5:116357457..116357517,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=12704
|EntrezGene=12704
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000128702_5end
|association_with_transcript=0bp_to_ENSMUST00000128702_5end
|cluster_id=chr5:116357457..116357517,+
|description=CAGE_peak_2_at_Cit_5end
|description=CAGE_peak_2_at_Cit_5end
|id=chr5:116357457..116357517,+
|id=chr5:116357457..116357517,+
|ontology_enrichment_celltype=CL:0000117!2.45e-11!23;CL:0000337!2.45e-11!23
|ontology_enrichment_celltype=CL:0000117!2.45e-11!23;CL:0000337!2.45e-11!23
|ontology_enrichment_celltype_v019_2=CL:0000117,9.63e-15,23;CL:0000337,9.63e-15,23;CL:0000540,1.12e-08,33;CL:0000047,1.12e-08,33;CL:0000031,1.12e-08,33;CL:0000404,1.12e-08,33
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!1.10e-21!52;UBERON:0005068!1.10e-21!52;UBERON:0006241!1.10e-21!52;UBERON:0007135!1.10e-21!52;UBERON:0000033!2.06e-21!63;UBERON:0002346!4.07e-21!71;UBERON:0003075!4.07e-21!71;UBERON:0007284!4.07e-21!71;UBERON:0001017!4.79e-21!73;UBERON:0005743!4.79e-21!73;UBERON:0000955!1.13e-20!50;UBERON:0006238!1.13e-20!50;UBERON:0000073!2.63e-20!75;UBERON:0001016!2.63e-20!75;UBERON:0002616!5.34e-20!49;UBERON:0004121!4.59e-18!102;UBERON:0000924!4.59e-18!102;UBERON:0006601!4.59e-18!102;UBERON:0002020!5.02e-18!34;UBERON:0003056!3.17e-17!49;UBERON:0003080!1.74e-15!40;UBERON:0002791!8.19e-15!29;UBERON:0003528!8.19e-15!29;UBERON:0001893!8.19e-15!29;UBERON:0002780!9.64e-15!39;UBERON:0001890!9.64e-15!39;UBERON:0006240!9.64e-15!39;UBERON:0002619!2.15e-10!17;UBERON:0007811!3.08e-10!86;UBERON:0000956!5.90e-10!21;UBERON:0001869!5.90e-10!21;UBERON:0000203!5.90e-10!21;UBERON:0000025!1.16e-09!114;UBERON:0004111!2.79e-09!122;UBERON:0000153!7.89e-09!94;UBERON:0002021!1.35e-08!10;UBERON:0000411!1.35e-08!10;UBERON:0001950!1.35e-08!10;UBERON:0003076!5.92e-07!12;UBERON:0003057!5.92e-07!12
|ontology_enrichment_uberon=UBERON:0001049!1.10e-21!52;UBERON:0005068!1.10e-21!52;UBERON:0006241!1.10e-21!52;UBERON:0007135!1.10e-21!52;UBERON:0000033!2.06e-21!63;UBERON:0002346!4.07e-21!71;UBERON:0003075!4.07e-21!71;UBERON:0007284!4.07e-21!71;UBERON:0001017!4.79e-21!73;UBERON:0005743!4.79e-21!73;UBERON:0000955!1.13e-20!50;UBERON:0006238!1.13e-20!50;UBERON:0000073!2.63e-20!75;UBERON:0001016!2.63e-20!75;UBERON:0002616!5.34e-20!49;UBERON:0004121!4.59e-18!102;UBERON:0000924!4.59e-18!102;UBERON:0006601!4.59e-18!102;UBERON:0002020!5.02e-18!34;UBERON:0003056!3.17e-17!49;UBERON:0003080!1.74e-15!40;UBERON:0002791!8.19e-15!29;UBERON:0003528!8.19e-15!29;UBERON:0001893!8.19e-15!29;UBERON:0002780!9.64e-15!39;UBERON:0001890!9.64e-15!39;UBERON:0006240!9.64e-15!39;UBERON:0002619!2.15e-10!17;UBERON:0007811!3.08e-10!86;UBERON:0000956!5.90e-10!21;UBERON:0001869!5.90e-10!21;UBERON:0000203!5.90e-10!21;UBERON:0000025!1.16e-09!114;UBERON:0004111!2.79e-09!122;UBERON:0000153!7.89e-09!94;UBERON:0002021!1.35e-08!10;UBERON:0000411!1.35e-08!10;UBERON:0001950!1.35e-08!10;UBERON:0003076!5.92e-07!12;UBERON:0003057!5.92e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.62e-27,54;UBERON:0001049,6.22e-25,52;UBERON:0005068,6.22e-25,52;UBERON:0006241,6.22e-25,52;UBERON:0007135,6.22e-25,52;UBERON:0001017,4.55e-24,73;UBERON:0002020,2.82e-23,34;UBERON:0001016,4.53e-23,75;UBERON:0002346,1.24e-21,64;UBERON:0003075,1.24e-21,64;UBERON:0007284,1.24e-21,64;UBERON:0000955,1.05e-19,47;UBERON:0006238,1.05e-19,47;UBERON:0002616,1.04e-18,46;UBERON:0004121,3.17e-18,95;UBERON:0000924,3.17e-18,95;UBERON:0006601,3.17e-18,95;UBERON:0003528,5.85e-18,29;UBERON:0002791,5.85e-18,29;UBERON:0001893,5.85e-18,29;UBERON:0010371,1.67e-17,73;UBERON:0003080,8.24e-16,40;UBERON:0002780,1.03e-14,39;UBERON:0001890,1.03e-14,39;UBERON:0006240,1.03e-14,39;UBERON:0003056,1.44e-14,49;UBERON:0002021,6.22e-14,10;UBERON:0000411,6.22e-14,10;UBERON:0001950,6.22e-14,10;UBERON:0010314,1.54e-11,92;UBERON:0002619,2.22e-11,17;UBERON:0003076,3.42e-10,12;UBERON:0003057,3.42e-10,12;UBERON:0000956,3.65e-10,21;UBERON:0001869,3.65e-10,21;UBERON:0000203,3.65e-10,21;UBERON:0002420,8.46e-10,8;UBERON:0007245,8.46e-10,8;UBERON:0010009,8.46e-10,8;UBERON:0010011,8.46e-10,8;UBERON:0000454,8.46e-10,8;UBERON:0000025,1.18e-08,114;UBERON:0002240,4.33e-08,6;UBERON:0005174,4.33e-08,6;UBERON:0001137,4.33e-08,6;UBERON:0004111,2.21e-07,122;UBERON:0001948,8.26e-07,5;UBERON:0002315,8.26e-07,5
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,5.69790044012167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0.878744730937887,0.58328969722285,0.839918529752175,0,0,0,0,0,0,0,2.83243045203437,5.81890077199236,5.07065122804943,0,0,0,0,0,0.599200221036809,0.768436610643109,0,0.405017814995072,0.210324961351382,24.8516356431309,19.436431603742,1.22490799214954,0.479227355091182,0.919218786610021,45.1475112097494,50.308811205564,49.0004841087417,5.40733779693795,3.84248103130121,5.73004707612436,32.1060448851588,12.9435400307286,19.0997809721013,20.0347438122094,19.362548588678,7.08317894136142,0,0.151143120213571,0,0,0,0,0.649776417447669,0,1.68533304158102,0,0,0,0.422530259330042,0,0,0,0,0,0,0.45673551887624,0,0.445326417194474,0.173485326766136,0.304465478312141,0,0.301445281105245,0.352766121407114,0.502666365318702,0,0,0,0.323533699894818,0,0,0,21.6657789788545,26.5997317653088,0,0,0,0,48.3823765277577,49.8675657072303,2.76439574648302,38.4151747624931,37.5901722275586,57.9728644321173,45.1030711328366,0.101839363850316,0.124406970610093,0,1.05220927943237,1.04096354370163,0,0.540186389416048,0.452114453507145,0.95251098811859,0.640568601424249,0.843315521037559,2.06962696591213,0.215567992932842,0,0,0.219195732427575,0,0,0.411564272815887,0,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,13.8791366052324,1.3377599609307,0,0.528901133327089,0.426576501070468,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0.350679099451593,0.252946148497029,0,0.156998727841375,0,0,0.667380422864376,0.982794975566015,1.12431056192427,2.23146133527353,2.41177159752417,2.03700681425136,2.5892652370573,0.324270453550071,0,0,0.372140947668503,0.312037673114561,0,0.179397413521912,0.482443521363367,0.184753190166605,0,0,0.169745085775188,0,0,0.476087281772027,0.195133647857799,0.315270288212382,0.44292937929755,0.318909537314974,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0,0,38.0504898271067,35.5151410374376,0,0,0,0,0,0,0,0,0,0,0.395287777946524,20.5645642509957,0,0,0,0,0,0,0,0.188605079755898,0.295301892880773,0.614870295887855,0.258428293168221,0,0.356497378384721,0,0,0,0.680879211507576,0.540183282093931,0.129358683782755,0.214337035031592,0,0,0.164549020602121,0.913394847343798,0,0,0.220528398054962,0,0,0,0,0.164140899745061,0,40.6081411403016,0,0,0,0.188368457004691,0,0.228778173206523,0,0,0,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0,0.404593039154462,0.247960367176008,0.26175594198403,0.259229946583586,0,0,0,0.165458490457098,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.965947970160952,0,0,0,0,37.2736216127264,34.9847179745454,30.9363577257274,29.0431878160832,32.8839609489908,52.1221789198893,32.4010800111267,34.674732648265,42.142244035531,50.7405105516784,0.103787347584177,0.798049746802062,0.512200817262403,1.45864030240976,1.25767897576789,2.20612210140017,0.44449345560323,2.06035057238894,1.60459604795908,1.01078884705519,1.52087579934144,1.88626341386076,1.40462261204824,1.6646539625266,1.49332219284595,1.90517476513229,0.811190281613988,1.54327376370964,2.88460130562315,1.32479028120958,1.37147700954166,0.887379030796687,1.1921809497366,0.436039249896986,1.31753132581463,0.930760686808441,0.365855945745545,0.526139422875686,0.950628796921032,0.561142271657738,0.949080144993393,0.689531376628944,1.63692417267876,0.929621047115796,1.54325288784913,2.24829520144151,0.935726433781634,0.429742108096597,1.14772999241306,0.441182838239031,1.15933917810211
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,5.69790044012167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0.878744730937887,0.58328969722285,0.839918529752175,0,0,0,0,0,0,0,2.83243045203437,5.81890077199236,5.07065122804943,0,0,0,0,0,0.599200221036809,0.768436610643109,0,0.405017814995072,0.210324961351382,24.8516356431309,19.436431603742,1.22490799214954,0.479227355091182,0.919218786610021,45.1475112097494,50.308811205564,49.0004841087417,5.40733779693795,3.84248103130121,5.73004707612436,32.1060448851588,12.9435400307286,19.0997809721013,20.0347438122094,19.362548588678,7.08317894136142,0,0.151143120213571,0,0,0,0,0.649776417447669,0,1.68533304158102,0,0,0,0.422530259330042,0,0,0,0,0,0,0.45673551887624,0,0.445326417194474,0.173485326766136,0.304465478312141,0,0.301445281105245,0.352766121407114,0.502666365318702,0,0,0,0.323533699894818,0,0,0,21.6657789788545,26.5997317653088,0,0,0,0,48.3823765277577,49.8675657072303,2.76439574648302,38.4151747624931,37.5901722275586,57.9728644321173,45.1030711328366,0.101839363850316,0.124406970610093,0,1.05220927943237,1.04096354370163,0,0.540186389416048,0.452114453507145,0.95251098811859,0.640568601424249,0.843315521037559,2.06962696591213,0.215567992932842,0,0,0.219195732427575,0,0,0.411564272815887,0,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,13.8791366052324,1.3377599609307,0,0.528901133327089,0.426576501070468,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0.350679099451593,0.252946148497029,0,0.156998727841375,0,0,0.667380422864376,0.982794975566015,1.12431056192427,2.23146133527353,2.41177159752417,2.03700681425136,2.5892652370573,0.324270453550071,0,0,0.372140947668503,0.312037673114561,0,0.179397413521912,0.482443521363367,0.184753190166605,0,0,0.169745085775188,0,0,0.476087281772027,0.195133647857799,0.315270288212382,0.44292937929755,0.318909537314974,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0,0,38.0504898271067,35.5151410374376,0,0,0,0,0,0,0,0,0,0,0.395287777946524,20.5645642509957,0,0,0,0,0,0,0,0.188605079755898,0.295301892880773,0.614870295887855,0.258428293168221,0,0.356497378384721,0,0,0,0.680879211507576,0.540183282093931,0.129358683782755,0.214337035031592,0,0,0.164549020602121,0.913394847343798,0,0,0.220528398054962,0,0,0,0,0.164140899745061,0,40.6081411403016,0,0,0,0.188368457004691,0,0.228778173206523,0,0,0,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0,0.404593039154462,0.247960367176008,0.26175594198403,0.259229946583586,0,0,0,0.165458490457098,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.965947970160952,0,0,0,0,37.2736216127264,34.9847179745454,30.9363577257274,29.0431878160832,32.8839609489908,52.1221789198893,32.4010800111267,34.674732648265,42.142244035531,50.7405105516784,0.103787347584177,0.798049746802062,0.512200817262403,1.45864030240976,1.25767897576789,2.20612210140017,0.44449345560323,2.06035057238894,1.60459604795908,1.01078884705519,1.52087579934144,1.88626341386076,1.40462261204824,1.6646539625266,1.49332219284595,1.90517476513229,0.811190281613988,1.54327376370964,2.88460130562315,1.32479028120958,1.37147700954166,0.887379030796687,1.1921809497366,0.436039249896986,1.31753132581463,0.930760686808441,0.365855945745545,0.526139422875686,0.950628796921032,0.561142271657738,0.949080144993393,0.689531376628944,1.63692417267876,0.929621047115796,1.54325288784913,2.24829520144151,0.935726433781634,0.429742108096597,1.14772999241306,0.441182838239031,1.15933917810211
|short_description=p2@Cit
|short_description=p2@Cit
}}
}}

Latest revision as of 17:49, 1 October 2015

Short description:p2@Cit
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Cit_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000128702_5end
EntrezGene:Cit
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Cit

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.83
Mouse Granule cells, donor2.CNhs12357.11731-123E35.82
Mouse Granule cells, donor3.CNhs12108.11636-122C75.07
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F124.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D519.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.22
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D345.15
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F350.31
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D749.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.41
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.84
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.73
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E432.11
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E512.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I619.10
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D620.03
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F619.36
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.08
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.69
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B221.67
cerebellum, neonate N30.CNhs11135.1395-42I226.60
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A448.38
corpus striatum, adult.CNhs10487.19-21D849.87
corpus striatum, neonate N00.CNhs11226.630-43F12.76
cortex, adult.CNhs10473.12-14D538.42
cortex, neonate N30.CNhs11107.1392-42F237.59
diencephalon, adult.CNhs10482.20-12F257.97
diencephalon, neonate N30.CNhs11201.1388-42B245.10
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C61.04
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.95
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.84
eyeball, neonate N16.CNhs11188.777-19A22.07
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E813.88
hippocampus, neonate N00.CNhs11228.627-43G11.34
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E11.12
liver, embryo E15.CNhs10520.433-16D72.23
liver, embryo E16.CNhs10523.462-17F52.41
liver, embryo E17.CNhs10510.481-18A32.04
liver, embryo E18.CNhs10579.499-43G42.59
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C238.05
medulla oblongata, neonate N30.CNhs11200.1396-42A335.52
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I920.56
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C940.61
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A137.27
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A234.98
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A330.94
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D729.04
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A432.88
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A552.12
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A632.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A734.67
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A842.14
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A950.74
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F22.21
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.66
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I52.25
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)9.63e-1523
neuroblast (sensu Vertebrata)9.63e-1523
neuron1.12e-0833
neuronal stem cell1.12e-0833
neuroblast1.12e-0833
electrically signaling cell1.12e-0833

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.62e-2754
neural tube6.22e-2552
neural rod6.22e-2552
future spinal cord6.22e-2552
neural keel6.22e-2552
central nervous system4.55e-2473
gray matter2.82e-2334
nervous system4.53e-2375
neurectoderm1.24e-2164
neural plate1.24e-2164
presumptive neural plate1.24e-2164
brain1.05e-1947
future brain1.05e-1947
regional part of brain1.04e-1846
ectoderm-derived structure3.17e-1895
ectoderm3.17e-1895
presumptive ectoderm3.17e-1895
brain grey matter5.85e-1829
regional part of telencephalon5.85e-1829
telencephalon5.85e-1829
ecto-epithelium1.67e-1773
anterior neural tube8.24e-1640
regional part of forebrain1.03e-1439
forebrain1.03e-1439
future forebrain1.03e-1439
pre-chordal neural plate1.44e-1449
occipital lobe6.22e-1410
visual cortex6.22e-1410
neocortex6.22e-1410
structure with developmental contribution from neural crest1.54e-1192
regional part of cerebral cortex2.22e-1117
posterior neural tube3.42e-1012
chordal neural plate3.42e-1012
cerebral cortex3.65e-1021
cerebral hemisphere3.65e-1021
pallium3.65e-1021
basal ganglion8.46e-108
nuclear complex of neuraxis8.46e-108
aggregate regional part of brain8.46e-108
collection of basal ganglia8.46e-108
cerebral subcortex8.46e-108
tube1.18e-08114
spinal cord4.33e-086
dorsal region element4.33e-086
dorsum4.33e-086
anatomical conduit2.21e-07122
regional part of spinal cord8.26e-075
gray matter of spinal cord8.26e-075
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