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FFCP PHASE1:Mm9::chr7:53040940..53040977,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=381983
|EntrezGene=381983
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=60bp_to_ENSMUST00000134347_5end
|association_with_transcript=60bp_to_ENSMUST00000134347_5end
|cluster_id=chr7:53040940..53040977,+
|description=CAGE_peak_4_at_Lmtk3_5end
|description=CAGE_peak_4_at_Lmtk3_5end
|id=chr7:53040940..53040977,+
|id=chr7:53040940..53040977,+
|ontology_enrichment_celltype=CL:0000540!1.08e-17!33;CL:0000047!1.08e-17!33;CL:0000031!1.08e-17!33;CL:0000404!1.08e-17!33;CL:0000117!1.49e-14!23;CL:0000337!1.49e-14!23;CL:0000221!4.78e-14!44;CL:0000133!4.78e-14!44;CL:0002319!9.68e-14!43;CL:0000393!6.01e-13!39;CL:0000211!6.01e-13!39;CL:0000055!7.00e-10!50
|ontology_enrichment_celltype=CL:0000540!1.08e-17!33;CL:0000047!1.08e-17!33;CL:0000031!1.08e-17!33;CL:0000404!1.08e-17!33;CL:0000117!1.49e-14!23;CL:0000337!1.49e-14!23;CL:0000221!4.78e-14!44;CL:0000133!4.78e-14!44;CL:0002319!9.68e-14!43;CL:0000393!6.01e-13!39;CL:0000211!6.01e-13!39;CL:0000055!7.00e-10!50
|ontology_enrichment_celltype_v019_2=CL:0000540,4.26e-25,33;CL:0000047,4.26e-25,33;CL:0000031,4.26e-25,33;CL:0000404,4.26e-25,33;CL:0000117,1.74e-22,23;CL:0000337,1.74e-22,23;CL:0000221,6.73e-20,44;CL:0000133,6.73e-20,44;CL:0000393,1.28e-19,39;CL:0000211,1.28e-19,39;CL:0002319,2.07e-19,43;CL:0002321,1.10e-08,70
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!4.98e-33!73;UBERON:0005743!4.98e-33!73;UBERON:0000073!3.96e-31!75;UBERON:0001016!3.96e-31!75;UBERON:0002346!5.86e-31!71;UBERON:0003075!5.86e-31!71;UBERON:0007284!5.86e-31!71;UBERON:0004121!1.30e-30!102;UBERON:0000924!1.30e-30!102;UBERON:0006601!1.30e-30!102;UBERON:0001049!5.97e-25!52;UBERON:0005068!5.97e-25!52;UBERON:0006241!5.97e-25!52;UBERON:0007135!5.97e-25!52;UBERON:0000033!1.29e-24!63;UBERON:0000955!3.68e-23!50;UBERON:0006238!3.68e-23!50;UBERON:0002616!1.28e-22!49;UBERON:0003056!3.98e-22!49;UBERON:0002020!1.31e-19!34;UBERON:0003080!1.73e-19!40;UBERON:0002780!7.23e-19!39;UBERON:0001890!7.23e-19!39;UBERON:0006240!7.23e-19!39;UBERON:0002791!9.95e-16!29;UBERON:0003528!9.95e-16!29;UBERON:0001893!9.95e-16!29;UBERON:0000153!2.59e-12!94;UBERON:0007811!5.77e-12!86;UBERON:0000956!1.53e-10!21;UBERON:0001869!1.53e-10!21;UBERON:0000203!1.53e-10!21;UBERON:0002619!3.31e-09!17;UBERON:0002021!5.23e-07!10;UBERON:0000411!5.23e-07!10;UBERON:0001950!5.23e-07!10
|ontology_enrichment_uberon=UBERON:0001017!4.98e-33!73;UBERON:0005743!4.98e-33!73;UBERON:0000073!3.96e-31!75;UBERON:0001016!3.96e-31!75;UBERON:0002346!5.86e-31!71;UBERON:0003075!5.86e-31!71;UBERON:0007284!5.86e-31!71;UBERON:0004121!1.30e-30!102;UBERON:0000924!1.30e-30!102;UBERON:0006601!1.30e-30!102;UBERON:0001049!5.97e-25!52;UBERON:0005068!5.97e-25!52;UBERON:0006241!5.97e-25!52;UBERON:0007135!5.97e-25!52;UBERON:0000033!1.29e-24!63;UBERON:0000955!3.68e-23!50;UBERON:0006238!3.68e-23!50;UBERON:0002616!1.28e-22!49;UBERON:0003056!3.98e-22!49;UBERON:0002020!1.31e-19!34;UBERON:0003080!1.73e-19!40;UBERON:0002780!7.23e-19!39;UBERON:0001890!7.23e-19!39;UBERON:0006240!7.23e-19!39;UBERON:0002791!9.95e-16!29;UBERON:0003528!9.95e-16!29;UBERON:0001893!9.95e-16!29;UBERON:0000153!2.59e-12!94;UBERON:0007811!5.77e-12!86;UBERON:0000956!1.53e-10!21;UBERON:0001869!1.53e-10!21;UBERON:0000203!1.53e-10!21;UBERON:0002619!3.31e-09!17;UBERON:0002021!5.23e-07!10;UBERON:0000411!5.23e-07!10;UBERON:0001950!5.23e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.53e-44,73;UBERON:0001016,7.87e-43,75;UBERON:0004121,1.07e-39,95;UBERON:0000924,1.07e-39,95;UBERON:0006601,1.07e-39,95;UBERON:0002346,5.03e-38,64;UBERON:0003075,5.03e-38,64;UBERON:0007284,5.03e-38,64;UBERON:0000073,9.82e-37,54;UBERON:0001049,7.53e-33,52;UBERON:0005068,7.53e-33,52;UBERON:0006241,7.53e-33,52;UBERON:0007135,7.53e-33,52;UBERON:0010371,2.03e-32,73;UBERON:0002020,1.69e-28,34;UBERON:0000955,1.93e-28,47;UBERON:0006238,1.93e-28,47;UBERON:0003056,8.97e-28,49;UBERON:0002616,1.31e-27,46;UBERON:0003080,2.06e-25,40;UBERON:0002780,1.90e-24,39;UBERON:0001890,1.90e-24,39;UBERON:0006240,1.90e-24,39;UBERON:0010314,3.63e-24,92;UBERON:0003528,2.45e-22,29;UBERON:0002791,2.45e-22,29;UBERON:0001893,2.45e-22,29;UBERON:0000956,3.85e-14,21;UBERON:0001869,3.85e-14,21;UBERON:0000203,3.85e-14,21;UBERON:0002619,5.76e-12,17;UBERON:0002021,2.43e-10,10;UBERON:0000411,2.43e-10,10;UBERON:0001950,2.43e-10,10;UBERON:0002420,1.30e-09,8;UBERON:0007245,1.30e-09,8;UBERON:0010009,1.30e-09,8;UBERON:0010011,1.30e-09,8;UBERON:0000454,1.30e-09,8;UBERON:0003076,1.02e-07,12;UBERON:0003057,1.02e-07,12;UBERON:0000025,1.57e-07,114;UBERON:0001948,1.68e-07,5;UBERON:0002315,1.68e-07,5;UBERON:0011216,2.78e-07,194;UBERON:0000369,5.29e-07,5;UBERON:0002435,5.29e-07,5;UBERON:0000204,5.29e-07,5;UBERON:0010082,5.29e-07,5
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0,0,0,0.218025156380447,0.659058548203415,0.388859798148567,0,1.43752564364972,0,0,0,0,0,0,5.66486090406874,7.93486468908049,8.87363964908651,0.338844532069132,0,0,0,0,0,1.53687322128622,1.03689612308478,1.35005938331691,1.05162480675691,8.85518051651791,7.50953039235486,1.5923803897944,1.24599112323707,1.83843757322004,4.40463523997555,2.042997409363,1.84327839907492,5.80299666012853,6.77008562657831,6.25096044668112,1.95428099300967,3.37657566019008,3.0559649555362,7.66034322231536,7.54569908235246,6.89677949553612,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,1.12674735821344,0,0,0,0,0,0,0.11418387971906,0,1.48442139064825,0.693941307064543,0.608930956624282,0.691846491768175,0.60289056221049,1.05829836422134,0.753999547978053,0,0,0,0,0,0.484875253135222,0,3.22058876712702,10.2628886338593,0,0,0,0,2.99581278809645,3.20250421973039,4.52355667606312,2.78118912307642,3.06858548796397,3.32460871295296,1.78465389374533,0.407357455401265,0,0,0,1.69156575851515,0.919608417733892,2.52086981727489,0.90422890701429,3.12967896096108,1.7935920839879,1.3118241438362,3.10444044886819,0.862271971731369,2.83659120251729,2.11141348996739,0.657587197282725,1.39023624612799,0,0,0.995171334092466,0,0,0,0,0.234526059981096,0.180062061461015,0.473489471170421,0,0,0,0.536546802799238,0,0.16455984991348,0,0,0,0,0,4.20579897128254,4.52780294468852,0,0,1.06644125267617,0.928946687441754,0.257734922644187,0.605050573870028,0.444756087689741,0,0,0.164698954724011,1.00534083520108,0.198956472041151,0,0,0,0,0.569003702859245,0.456994050438915,1.1270773567308,1.01825663922657,0.387904974335251,0.420814919341911,0.69560190836683,0.147610147979602,0.470996183524124,0.246794327843601,0,0.667380422864376,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0.651859905768103,0.169745085775188,0.469380496577004,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0.318909537314974,0,0,0,0,0,0,0,1.9266070798535,2.46144541843627,0,0,1.57754109708128,1.56175497718655,2.36965737506079,1.43381278771531,1.33679204449436,1.13230612315533,0.809621403349789,1.46127928955656,1.58115111178609,1.92792789853084,0.141940085208269,0.35613120733451,1.62886959353576,0.659880491890142,0,0.242780636154981,0.604647113929502,0.565815239267694,0.885905678642318,0,0,0,0,0,0,0,1.02131881726136,0.36012218806262,2.8458910432206,1.50035924522115,0.886701168211368,1.96205699362278,0.493647061806363,1.2178597964584,0,0,0,0.32977250588296,0,0.120625849856312,0.119372344003136,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,2.21435195506795,0.813277868507395,0.432021363287205,0.209088296014469,0.218362563746178,0.404593039154462,0.165306911450672,0,0.129614973291793,0,0,0.448549638131936,0,0.194451188344048,0.258319646955462,0.168956125490778,0.938857909166032,0.39061315453185,0.104859344425711,0,0,0,0,0.205421914329655,0.129920822977795,0,0,0,0,0,0.0762068066549998,0.100826185136841,0,0,0,0,0.221985953374065,0.179427713218951,0,0,0,0.183151624267265,0.214368379079066,0.501572104035363,3.95326289831947,1.84130094602871,4.01026859407578,4.29632955859219,1.37016503954128,2.2661816921691,4.72515750162264,2.2516060161211,3.62513927187364,2.5888015587591,0.207574695168353,3.19219898720825,1.87806966329548,1.21553358534147,0.419226325255965,0.735374033800057,0.222246727801615,0.412070114477788,1.28367683836726,1.51618327058278,0,0.943131706930381,0.842773567228942,0.960377286073039,0.918967503289812,0,0.811190281613988,0.964546102318525,0.412085900803307,0.883193520806384,1.37147700954166,1.24233064311536,0.238436189947321,0.436039249896986,0.658765662907314,0.676916863133412,0.548783918618318,0,0.407412341537585,0,0.949080144993393,0.886540341380071,0,1.39443157067369,0.192906610981141,1.99848462350357,0.233931608445408,2.14871054048298,1.72159498861959,0.441182838239031,0.231867835620421
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|short_description=p4@Lmtk3
|short_description=p4@Lmtk3
}}
}}

Latest revision as of 21:54, 26 September 2015

Short description:p4@Lmtk3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Lmtk3_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: 60bp_to_ENSMUST00000134347_5end
EntrezGene:Lmtk3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Lmtk3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C35.66
Mouse Granule cells, donor2.CNhs12357.11731-123E37.93
Mouse Granule cells, donor3.CNhs12108.11636-122C78.87
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.04
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F18.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.51
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.59
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.25
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.04
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.80
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.77
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.25
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.06
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.66
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.55
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.90
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.48
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C11.06
adrenal gland, neonate N25.CNhs11223.1377-27I30.75
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.22
cerebellum, neonate N30.CNhs11135.1395-42I210.26
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.00
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F14.52
cortex, adult.CNhs10473.12-14D52.78
cortex, neonate N30.CNhs11107.1392-42F23.07
diencephalon, adult.CNhs10482.20-12F23.32
diencephalon, neonate N30.CNhs11201.1388-42B21.78
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C61.69
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C92.52
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C63.13
eyeball, neonate N01.CNhs11140.1532-43E71.79
eyeball, neonate N02.CNhs11205.1551-44G81.31
eyeball, neonate N16.CNhs11188.777-19A23.10
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H22.84
forelimb, embryo E13.CNhs10589.384-1E22.11
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E84.21
hippocampus, neonate N00.CNhs11228.627-43G14.53
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.70
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.93
medulla oblongata, neonate N30.CNhs11200.1396-42A32.46
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.37
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I41.63
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C72.85
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F61.96
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.74
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E32.21
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.94
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.30
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H21.88
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.92
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C22.15
whole body, neonate N01.CNhs10576.659-23C61.72
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron4.26e-2533
neuronal stem cell4.26e-2533
neuroblast4.26e-2533
electrically signaling cell4.26e-2533
CNS neuron (sensu Vertebrata)1.74e-2223
neuroblast (sensu Vertebrata)1.74e-2223
ectodermal cell6.73e-2044
neurectodermal cell6.73e-2044
electrically responsive cell1.28e-1939
electrically active cell1.28e-1939
neural cell2.07e-1943
embryonic cell1.10e-0870

Uber anatomy
Ontology termp-valuen
central nervous system1.53e-4473
nervous system7.87e-4375
ectoderm-derived structure1.07e-3995
ectoderm1.07e-3995
presumptive ectoderm1.07e-3995
neurectoderm5.03e-3864
neural plate5.03e-3864
presumptive neural plate5.03e-3864
regional part of nervous system9.82e-3754
neural tube7.53e-3352
neural rod7.53e-3352
future spinal cord7.53e-3352
neural keel7.53e-3352
ecto-epithelium2.03e-3273
gray matter1.69e-2834
brain1.93e-2847
future brain1.93e-2847
pre-chordal neural plate8.97e-2849
regional part of brain1.31e-2746
anterior neural tube2.06e-2540
regional part of forebrain1.90e-2439
forebrain1.90e-2439
future forebrain1.90e-2439
structure with developmental contribution from neural crest3.63e-2492
brain grey matter2.45e-2229
regional part of telencephalon2.45e-2229
telencephalon2.45e-2229
cerebral cortex3.85e-1421
cerebral hemisphere3.85e-1421
pallium3.85e-1421
regional part of cerebral cortex5.76e-1217
occipital lobe2.43e-1010
visual cortex2.43e-1010
neocortex2.43e-1010
basal ganglion1.30e-098
nuclear complex of neuraxis1.30e-098
aggregate regional part of brain1.30e-098
collection of basal ganglia1.30e-098
cerebral subcortex1.30e-098
posterior neural tube1.02e-0712
chordal neural plate1.02e-0712
tube1.57e-07114
regional part of spinal cord1.68e-075
gray matter of spinal cord1.68e-075
organ system subdivision2.78e-07194
corpus striatum5.29e-075
striatum5.29e-075
ventral part of telencephalon5.29e-075
future corpus striatum5.29e-075
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