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FFCP PHASE1:Mm9::chr9:104472084..104472123,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=74020
|EntrezGene=74020
|HGNC=
|HGNC=
|MCL_coexpression_id=93
|TSSclassifier=NA
|UniProt=Q9D6C8,Q8BLR2
|UniProt=Q9D6C8,Q8BLR2
|association_with_transcript=0bp_to_ENSMUST00000077190,NM_028719,uc009rhr.1,uc012gzm.1_5end
|association_with_transcript=0bp_to_ENSMUST00000077190,NM_028719,uc009rhr.1,uc012gzm.1_5end
|cluster_id=chr9:104472084..104472123,+
|description=CAGE_peak_1_at_Cpne4_5end
|description=CAGE_peak_1_at_Cpne4_5end
|id=chr9:104472084..104472123,+
|id=chr9:104472084..104472123,+
|ontology_enrichment_celltype=CL:0000117!8.47e-13!23;CL:0000337!8.47e-13!23;CL:0000540!4.17e-07!33;CL:0000047!4.17e-07!33;CL:0000031!4.17e-07!33;CL:0000404!4.17e-07!33
|ontology_enrichment_celltype=CL:0000117!8.47e-13!23;CL:0000337!8.47e-13!23;CL:0000540!4.17e-07!33;CL:0000047!4.17e-07!33;CL:0000031!4.17e-07!33;CL:0000404!4.17e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,6.80e-16,23;CL:0000337,6.80e-16,23;CL:0000540,1.25e-09,33;CL:0000047,1.25e-09,33;CL:0000031,1.25e-09,33;CL:0000404,1.25e-09,33;CL:0000393,4.62e-07,39;CL:0000211,4.62e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!3.98e-20!63;UBERON:0002346!8.33e-20!71;UBERON:0003075!8.33e-20!71;UBERON:0007284!8.33e-20!71;UBERON:0001049!1.17e-19!52;UBERON:0005068!1.17e-19!52;UBERON:0006241!1.17e-19!52;UBERON:0007135!1.17e-19!52;UBERON:0000955!7.49e-19!50;UBERON:0006238!7.49e-19!50;UBERON:0003056!1.02e-18!49;UBERON:0002616!4.63e-18!49;UBERON:0002020!6.95e-18!34;UBERON:0004121!1.27e-17!102;UBERON:0000924!1.27e-17!102;UBERON:0006601!1.27e-17!102;UBERON:0003080!2.60e-17!40;UBERON:0001017!4.83e-17!73;UBERON:0005743!4.83e-17!73;UBERON:0000073!5.33e-17!75;UBERON:0001016!5.33e-17!75;UBERON:0002780!1.38e-16!39;UBERON:0001890!1.38e-16!39;UBERON:0006240!1.38e-16!39;UBERON:0002791!6.97e-15!29;UBERON:0003528!6.97e-15!29;UBERON:0001893!6.97e-15!29;UBERON:0007811!9.31e-11!86;UBERON:0000956!1.68e-10!21;UBERON:0001869!1.68e-10!21;UBERON:0000203!1.68e-10!21;UBERON:0002619!2.25e-09!17;UBERON:0002021!5.60e-09!10;UBERON:0000411!5.60e-09!10;UBERON:0001950!5.60e-09!10;UBERON:0000153!8.04e-09!94
|ontology_enrichment_uberon=UBERON:0000033!3.98e-20!63;UBERON:0002346!8.33e-20!71;UBERON:0003075!8.33e-20!71;UBERON:0007284!8.33e-20!71;UBERON:0001049!1.17e-19!52;UBERON:0005068!1.17e-19!52;UBERON:0006241!1.17e-19!52;UBERON:0007135!1.17e-19!52;UBERON:0000955!7.49e-19!50;UBERON:0006238!7.49e-19!50;UBERON:0003056!1.02e-18!49;UBERON:0002616!4.63e-18!49;UBERON:0002020!6.95e-18!34;UBERON:0004121!1.27e-17!102;UBERON:0000924!1.27e-17!102;UBERON:0006601!1.27e-17!102;UBERON:0003080!2.60e-17!40;UBERON:0001017!4.83e-17!73;UBERON:0005743!4.83e-17!73;UBERON:0000073!5.33e-17!75;UBERON:0001016!5.33e-17!75;UBERON:0002780!1.38e-16!39;UBERON:0001890!1.38e-16!39;UBERON:0006240!1.38e-16!39;UBERON:0002791!6.97e-15!29;UBERON:0003528!6.97e-15!29;UBERON:0001893!6.97e-15!29;UBERON:0007811!9.31e-11!86;UBERON:0000956!1.68e-10!21;UBERON:0001869!1.68e-10!21;UBERON:0000203!1.68e-10!21;UBERON:0002619!2.25e-09!17;UBERON:0002021!5.60e-09!10;UBERON:0000411!5.60e-09!10;UBERON:0001950!5.60e-09!10;UBERON:0000153!8.04e-09!94
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.50e-27,54;UBERON:0001049,3.43e-25,52;UBERON:0005068,3.43e-25,52;UBERON:0006241,3.43e-25,52;UBERON:0007135,3.43e-25,52;UBERON:0002346,5.40e-25,64;UBERON:0003075,5.40e-25,64;UBERON:0007284,5.40e-25,64;UBERON:0002020,1.58e-23,34;UBERON:0003056,2.36e-23,49;UBERON:0001017,3.08e-23,73;UBERON:0001016,3.96e-22,75;UBERON:0003080,9.21e-22,40;UBERON:0000955,2.46e-21,47;UBERON:0006238,2.46e-21,47;UBERON:0002780,8.72e-21,39;UBERON:0001890,8.72e-21,39;UBERON:0006240,8.72e-21,39;UBERON:0010371,1.12e-20,73;UBERON:0002616,2.65e-20,46;UBERON:0004121,3.49e-20,95;UBERON:0000924,3.49e-20,95;UBERON:0006601,3.49e-20,95;UBERON:0003528,1.96e-19,29;UBERON:0002791,1.96e-19,29;UBERON:0001893,1.96e-19,29;UBERON:0010314,9.93e-16,92;UBERON:0000956,1.82e-13,21;UBERON:0001869,1.82e-13,21;UBERON:0000203,1.82e-13,21;UBERON:0002619,6.56e-13,17;UBERON:0002021,1.11e-11,10;UBERON:0000411,1.11e-11,10;UBERON:0001950,1.11e-11,10;UBERON:0002420,3.36e-07,8;UBERON:0007245,3.36e-07,8;UBERON:0010009,3.36e-07,8;UBERON:0010011,3.36e-07,8;UBERON:0000454,3.36e-07,8
|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404950534779652,0,0,0,0.42438965179803,4.76242424845991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.68802551266472,12.6957835025288,11.4089652631112,0,0,0,0,0,0.299600110518405,0,1.97010263386108,1.08004750665353,0.420649922702764,3.99911378165325,7.95126747425809,3.79721477566358,3.83381884072945,4.5960939330501,18.7196997698961,14.1732945274558,19.6616362567992,4.48413378282659,9.69769022185542,1.56274011167028,5.02529398202486,8.4414391504752,9.77908785771585,13.258286346315,8.82704420954438,6.15118171223492,0.37863096666592,0.0755715601067855,0,0,0,0,0,0,1.82577746171277,0,0,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,0.776813650941515,0.29688427812965,1.38788261412909,0.913396434936424,0.922461989024234,2.26083960828934,1.17588707135705,0,0,0,0,0,0,0,0,0.292780797011547,0,0.766371165625774,0,0,0,29.5087559627501,14.640019290196,11.3088916901578,46.0634448509533,37.5901722275586,19.1165000994795,26.4453258800445,0.611036183101898,0,0,1.05220927943237,0,0,0.720248519221397,6.63101198477146,5.57899293040888,4.99643509110914,3.27956035959051,5.95017752699736,0,0.189106080167819,0,0,0,0,0,1.59227413454795,0,0,0,0,0,0.180062061461015,0.23674473558521,0,0.308534225774757,0.232533944750408,0,0,0,0,0.0810688095458557,0,0,0,25.6553737248235,18.7286394530298,0,0.264450566663544,1.06644125267617,0.232236671860439,0.257734922644187,0.201683524623343,1.11189021922435,1.14135375667535,0,1.97638745668813,1.00534083520108,1.98956472041151,1.36474860983384,0,0.432276099749388,0.796565093017469,0,0.685491075658373,0,0,0.193952487167626,0,0.126473074248515,0.147610147979602,0.470996183524124,0,0,0.333690211432188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.488894929326078,0.339490171550376,0.234690248288502,0,0,0,0.630540576424764,0.44292937929755,0.318909537314974,0,0,0,0,0,0,0,12.0412942490844,11.7211686592203,0,0,0,0,0,0,0,0,0,0,0.395287777946524,243.240236531308,0.141940085208269,1.24645922567079,0.162886959353576,0,0,0.728341908464944,0,0.188605079755898,0.590603785761546,0,0.258428293168221,0.727067458955011,0,0.316036757935816,0,0,1.02131881726136,0,0.129358683782755,3.64372959553707,2.48276327099183,1.42695054081656,2.30368628842969,0.304464949114599,0.23467170806371,0,0.220528398054962,0,0.161464426695906,0.241251699712623,0.358117032009409,0.164140899745061,0.582961673259701,9.08583979851498,0.341741761595705,5.57244543500701,1.29636169158798,0,0.27338845544205,0,0,0,0,0,0,0.406638934253697,0.108005340821801,0,0.218362563746178,0.269728692769641,0.165306911450672,0,0.518459893167171,0,0,0,0,0.194451188344048,0,0,0,0,0.104859344425711,0,0,0.316011120628178,0.202725215290164,0,0,0,0,0.240390899039938,0.147689527174577,0.100966449948148,0,0.100826185136841,0,0,0,1.36038230169127,0,0,0,0,0,0,0,0,32.7556068717899,30.8417908459809,35.5195218332426,37.4639937509239,36.309373547844,40.7912704590438,27.0009000092722,35.5753750547134,38.9702471726416,36.7609821343792,0.415149390336707,0.399024873401031,1.36586884603307,2.43106717068294,1.25767897576789,1.2869045591501,2.889207461421,3.91466608753899,2.88827288632634,1.76888048234658,3.54871019846336,2.26351609663291,2.62196220915671,2.88113185821912,2.52716063404698,0.476293691283074,2.89710814862139,3.27945674788299,1.64834360321323,2.06078488188156,2.40008476669791,2.66213709239006,2.86123427936785,2.0348498328526,2.82328141245992,2.79228206042532,2.74391959309159,2.10455769150274,2.03706170768793,3.36685362994643,2.37270036248348,1.87158516513571,2.45538625901814,1.54936841185966,2.3148793317737,2.99772693525535,1.63752125911786,2.57845264857958,1.53030665655075,0.441182838239031,0.695603506861264
|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404950534779652,0,0,0,0.42438965179803,4.76242424845991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.68802551266472,12.6957835025288,11.4089652631112,0,0,0,0,0,0.299600110518405,0,1.97010263386108,1.08004750665353,0.420649922702764,3.99911378165325,7.95126747425809,3.79721477566358,3.83381884072945,4.5960939330501,18.7196997698961,14.1732945274558,19.6616362567992,4.48413378282659,9.69769022185542,1.56274011167028,5.02529398202486,8.4414391504752,9.77908785771585,13.258286346315,8.82704420954438,6.15118171223492,0.37863096666592,0.0755715601067855,0,0,0,0,0,0,1.82577746171277,0,0,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,0.776813650941515,0.29688427812965,1.38788261412909,0.913396434936424,0.922461989024234,2.26083960828934,1.17588707135705,0,0,0,0,0,0,0,0,0.292780797011547,0,0.766371165625774,0,0,0,29.5087559627501,14.640019290196,11.3088916901578,46.0634448509533,37.5901722275586,19.1165000994795,26.4453258800445,0.611036183101898,0,0,1.05220927943237,0,0,0.720248519221397,6.63101198477146,5.57899293040888,4.99643509110914,3.27956035959051,5.95017752699736,0,0.189106080167819,0,0,0,0,0,1.59227413454795,0,0,0,0,0,0.180062061461015,0.23674473558521,0,0.308534225774757,0.232533944750408,0,0,0,0,0.0810688095458557,0,0,0,25.6553737248235,18.7286394530298,0,0.264450566663544,1.06644125267617,0.232236671860439,0.257734922644187,0.201683524623343,1.11189021922435,1.14135375667535,0,1.97638745668813,1.00534083520108,1.98956472041151,1.36474860983384,0,0.432276099749388,0.796565093017469,0,0.685491075658373,0,0,0.193952487167626,0,0.126473074248515,0.147610147979602,0.470996183524124,0,0,0.333690211432188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.488894929326078,0.339490171550376,0.234690248288502,0,0,0,0.630540576424764,0.44292937929755,0.318909537314974,0,0,0,0,0,0,0,12.0412942490844,11.7211686592203,0,0,0,0,0,0,0,0,0,0,0.395287777946524,243.240236531308,0.141940085208269,1.24645922567079,0.162886959353576,0,0,0.728341908464944,0,0.188605079755898,0.590603785761546,0,0.258428293168221,0.727067458955011,0,0.316036757935816,0,0,1.02131881726136,0,0.129358683782755,3.64372959553707,2.48276327099183,1.42695054081656,2.30368628842969,0.304464949114599,0.23467170806371,0,0.220528398054962,0,0.161464426695906,0.241251699712623,0.358117032009409,0.164140899745061,0.582961673259701,9.08583979851498,0.341741761595705,5.57244543500701,1.29636169158798,0,0.27338845544205,0,0,0,0,0,0,0.406638934253697,0.108005340821801,0,0.218362563746178,0.269728692769641,0.165306911450672,0,0.518459893167171,0,0,0,0,0.194451188344048,0,0,0,0,0.104859344425711,0,0,0.316011120628178,0.202725215290164,0,0,0,0,0.240390899039938,0.147689527174577,0.100966449948148,0,0.100826185136841,0,0,0,1.36038230169127,0,0,0,0,0,0,0,0,32.7556068717899,30.8417908459809,35.5195218332426,37.4639937509239,36.309373547844,40.7912704590438,27.0009000092722,35.5753750547134,38.9702471726416,36.7609821343792,0.415149390336707,0.399024873401031,1.36586884603307,2.43106717068294,1.25767897576789,1.2869045591501,2.889207461421,3.91466608753899,2.88827288632634,1.76888048234658,3.54871019846336,2.26351609663291,2.62196220915671,2.88113185821912,2.52716063404698,0.476293691283074,2.89710814862139,3.27945674788299,1.64834360321323,2.06078488188156,2.40008476669791,2.66213709239006,2.86123427936785,2.0348498328526,2.82328141245992,2.79228206042532,2.74391959309159,2.10455769150274,2.03706170768793,3.36685362994643,2.37270036248348,1.87158516513571,2.45538625901814,1.54936841185966,2.3148793317737,2.99772693525535,1.63752125911786,2.57845264857958,1.53030665655075,0.441182838239031,0.695603506861264
|short_description=p1@Cpne4
|short_description=p1@Cpne4
}}
}}

Latest revision as of 02:26, 26 September 2015

Short description:p1@Cpne4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Cpne4_5end
Coexpression cluster:MCL_coexpression_mm9:93
Association with transcript: 0bp_to_ENSMUST00000077190, NM_028719, uc009rhr.1, uc012gzm.1_5end
EntrezGene:Cpne4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Cpne4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.76
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C37.69
Mouse Granule cells, donor2.CNhs12357.11731-123E312.70
Mouse Granule cells, donor3.CNhs12108.11636-122C711.41
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.97
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.08
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.95
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.80
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.83
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D318.72
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F314.17
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D719.66
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.48
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F49.70
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.03
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E58.44
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I69.78
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D613.26
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F68.83
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.15
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C51.39
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F52.26
adrenal gland, neonate N00.CNhs11191.1311-23C11.18
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A429.51
corpus striatum, adult.CNhs10487.19-21D814.64
corpus striatum, neonate N00.CNhs11226.630-43F111.31
cortex, adult.CNhs10473.12-14D546.06
cortex, neonate N30.CNhs11107.1392-42F237.59
diencephalon, adult.CNhs10482.20-12F219.12
diencephalon, neonate N30.CNhs11201.1388-42B226.45
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D46.63
eyeball, neonate N00.CNhs11207.633-15C65.58
eyeball, neonate N01.CNhs11140.1532-43E75.00
eyeball, neonate N02.CNhs11205.1551-44G83.28
eyeball, neonate N16.CNhs11188.777-19A25.95
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I61.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E825.66
hippocampus, neonate N00.CNhs11228.627-43G118.73
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F71.14
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E91.98
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F21.99
intestine, neonate N10.CNhs11098.755-23A51.36
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C212.04
medulla oblongata, neonate N30.CNhs11200.1396-42A311.72
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I9243.24
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H71.25
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A53.64
pituitary gland, embryo E15.CNhs10592.427-16B92.48
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F52.30
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C99.09
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C15.57
spleen, embryo E18.CNhs11011.1271-21F21.30
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A132.76
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A230.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A335.52
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D737.46
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A436.31
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A540.79
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A627.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A735.58
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A838.97
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A936.76
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H21.37
whole body, embryo E14.5.CNhs10578.420-27D22.43
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.91
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.26
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.90
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.28
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.66
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.82
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.79
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.04
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.87
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.55
whole body, embryo E17.5.CNhs10513.490-9F92.31
whole body, embryo E17.CNhs10517.475-3I53.00
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C22.58
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)6.80e-1623
neuroblast (sensu Vertebrata)6.80e-1623
neuron1.25e-0933
neuronal stem cell1.25e-0933
neuroblast1.25e-0933
electrically signaling cell1.25e-0933
electrically responsive cell4.62e-0739
electrically active cell4.62e-0739

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.50e-2754
neural tube3.43e-2552
neural rod3.43e-2552
future spinal cord3.43e-2552
neural keel3.43e-2552
neurectoderm5.40e-2564
neural plate5.40e-2564
presumptive neural plate5.40e-2564
gray matter1.58e-2334
pre-chordal neural plate2.36e-2349
central nervous system3.08e-2373
nervous system3.96e-2275
anterior neural tube9.21e-2240
brain2.46e-2147
future brain2.46e-2147
regional part of forebrain8.72e-2139
forebrain8.72e-2139
future forebrain8.72e-2139
ecto-epithelium1.12e-2073
regional part of brain2.65e-2046
ectoderm-derived structure3.49e-2095
ectoderm3.49e-2095
presumptive ectoderm3.49e-2095
brain grey matter1.96e-1929
regional part of telencephalon1.96e-1929
telencephalon1.96e-1929
structure with developmental contribution from neural crest9.93e-1692
cerebral cortex1.82e-1321
cerebral hemisphere1.82e-1321
pallium1.82e-1321
regional part of cerebral cortex6.56e-1317
occipital lobe1.11e-1110
visual cortex1.11e-1110
neocortex1.11e-1110
basal ganglion3.36e-078
nuclear complex of neuraxis3.36e-078
aggregate regional part of brain3.36e-078
collection of basal ganglia3.36e-078
cerebral subcortex3.36e-078
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