FFCP PHASE1:Mm9::chr9:21822045..21822064,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1995 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:21822045..21822064,+ | |||
|description=CAGE_peak_at_chr9:21822045..21822064,+ | |description=CAGE_peak_at_chr9:21822045..21822064,+ | ||
|id=chr9:21822045..21822064,+ | |id=chr9:21822045..21822064,+ | ||
|ontology_enrichment_celltype=CL:0000117!3.71e-24!23;CL:0000337!3.71e-24!23;CL:0000540!1.59e-17!33;CL:0000047!1.59e-17!33;CL:0000031!1.59e-17!33;CL:0000404!1.59e-17!33;CL:0002319!6.72e-14!43;CL:0000221!2.40e-13!44;CL:0000133!2.40e-13!44;CL:0000393!2.66e-13!39;CL:0000211!2.66e-13!39;CL:0000055!1.55e-10!50;CL:0002609!2.12e-07!6 | |ontology_enrichment_celltype=CL:0000117!3.71e-24!23;CL:0000337!3.71e-24!23;CL:0000540!1.59e-17!33;CL:0000047!1.59e-17!33;CL:0000031!1.59e-17!33;CL:0000404!1.59e-17!33;CL:0002319!6.72e-14!43;CL:0000221!2.40e-13!44;CL:0000133!2.40e-13!44;CL:0000393!2.66e-13!39;CL:0000211!2.66e-13!39;CL:0000055!1.55e-10!50;CL:0002609!2.12e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.59e-45,23;CL:0000337,1.59e-45,23;CL:0000540,5.51e-30,33;CL:0000047,5.51e-30,33;CL:0000031,5.51e-30,33;CL:0000404,5.51e-30,33;CL:0000393,1.72e-24,39;CL:0000211,1.72e-24,39;CL:0002319,1.11e-21,43;CL:0000221,4.64e-21,44;CL:0000133,4.64e-21,44;CL:0002609,7.51e-14,6;CL:0002321,3.65e-11,70;CL:0000120,3.87e-08,3;CL:0002613,8.08e-08,3;CL:0002608,8.96e-08,3;CL:0002612,9.93e-08,3;CL:0002614,1.10e-07,3;CL:0002610,1.16e-07,3;CL:0000723,2.34e-07,91;CL:0000048,2.34e-07,91 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.41e-28!73;UBERON:0005743!1.41e-28!73;UBERON:0000073!2.84e-28!75;UBERON:0001016!2.84e-28!75;UBERON:0001049!8.27e-27!52;UBERON:0005068!8.27e-27!52;UBERON:0006241!8.27e-27!52;UBERON:0007135!8.27e-27!52;UBERON:0002346!8.75e-27!71;UBERON:0003075!8.75e-27!71;UBERON:0007284!8.75e-27!71;UBERON:0002020!7.41e-26!34;UBERON:0000955!4.70e-25!50;UBERON:0006238!4.70e-25!50;UBERON:0000033!1.13e-24!63;UBERON:0004121!1.25e-24!102;UBERON:0000924!1.25e-24!102;UBERON:0006601!1.25e-24!102;UBERON:0002616!3.17e-24!49;UBERON:0002791!4.39e-21!29;UBERON:0003528!4.39e-21!29;UBERON:0001893!4.39e-21!29;UBERON:0003056!5.00e-21!49;UBERON:0003080!9.99e-19!40;UBERON:0002780!6.21e-18!39;UBERON:0001890!6.21e-18!39;UBERON:0006240!6.21e-18!39;UBERON:0007811!1.86e-14!86;UBERON:0000956!2.19e-13!21;UBERON:0001869!2.19e-13!21;UBERON:0000203!2.19e-13!21;UBERON:0000153!1.35e-12!94;UBERON:0002619!6.30e-10!17;UBERON:0002420!3.99e-09!8;UBERON:0007245!3.99e-09!8;UBERON:0010009!3.99e-09!8;UBERON:0010011!3.99e-09!8;UBERON:0000454!3.99e-09!8;UBERON:0003076!1.17e-08!12;UBERON:0003057!1.17e-08!12;UBERON:0002021!1.12e-07!10;UBERON:0000411!1.12e-07!10;UBERON:0001950!1.12e-07!10;UBERON:0002240!8.82e-07!6;UBERON:0005174!8.82e-07!6;UBERON:0001137!8.82e-07!6 | |ontology_enrichment_uberon=UBERON:0001017!1.41e-28!73;UBERON:0005743!1.41e-28!73;UBERON:0000073!2.84e-28!75;UBERON:0001016!2.84e-28!75;UBERON:0001049!8.27e-27!52;UBERON:0005068!8.27e-27!52;UBERON:0006241!8.27e-27!52;UBERON:0007135!8.27e-27!52;UBERON:0002346!8.75e-27!71;UBERON:0003075!8.75e-27!71;UBERON:0007284!8.75e-27!71;UBERON:0002020!7.41e-26!34;UBERON:0000955!4.70e-25!50;UBERON:0006238!4.70e-25!50;UBERON:0000033!1.13e-24!63;UBERON:0004121!1.25e-24!102;UBERON:0000924!1.25e-24!102;UBERON:0006601!1.25e-24!102;UBERON:0002616!3.17e-24!49;UBERON:0002791!4.39e-21!29;UBERON:0003528!4.39e-21!29;UBERON:0001893!4.39e-21!29;UBERON:0003056!5.00e-21!49;UBERON:0003080!9.99e-19!40;UBERON:0002780!6.21e-18!39;UBERON:0001890!6.21e-18!39;UBERON:0006240!6.21e-18!39;UBERON:0007811!1.86e-14!86;UBERON:0000956!2.19e-13!21;UBERON:0001869!2.19e-13!21;UBERON:0000203!2.19e-13!21;UBERON:0000153!1.35e-12!94;UBERON:0002619!6.30e-10!17;UBERON:0002420!3.99e-09!8;UBERON:0007245!3.99e-09!8;UBERON:0010009!3.99e-09!8;UBERON:0010011!3.99e-09!8;UBERON:0000454!3.99e-09!8;UBERON:0003076!1.17e-08!12;UBERON:0003057!1.17e-08!12;UBERON:0002021!1.12e-07!10;UBERON:0000411!1.12e-07!10;UBERON:0001950!1.12e-07!10;UBERON:0002240!8.82e-07!6;UBERON:0005174!8.82e-07!6;UBERON:0001137!8.82e-07!6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.03e-39,34;UBERON:0000073,5.66e-36,54;UBERON:0001017,4.14e-35,73;UBERON:0001016,5.86e-34,75;UBERON:0003528,1.07e-32,29;UBERON:0002791,1.07e-32,29;UBERON:0001893,1.07e-32,29;UBERON:0001049,4.01e-32,52;UBERON:0005068,4.01e-32,52;UBERON:0006241,4.01e-32,52;UBERON:0007135,4.01e-32,52;UBERON:0003080,1.48e-26,40;UBERON:0000955,6.81e-26,47;UBERON:0006238,6.81e-26,47;UBERON:0004121,4.13e-25,95;UBERON:0000924,4.13e-25,95;UBERON:0006601,4.13e-25,95;UBERON:0002780,4.73e-25,39;UBERON:0001890,4.73e-25,39;UBERON:0006240,4.73e-25,39;UBERON:0002346,9.29e-25,64;UBERON:0003075,9.29e-25,64;UBERON:0007284,9.29e-25,64;UBERON:0002616,1.79e-24,46;UBERON:0010371,7.98e-21,73;UBERON:0003056,1.39e-20,49;UBERON:0000956,1.12e-17,21;UBERON:0001869,1.12e-17,21;UBERON:0000203,1.12e-17,21;UBERON:0002420,1.80e-17,8;UBERON:0007245,1.80e-17,8;UBERON:0010009,1.80e-17,8;UBERON:0010011,1.80e-17,8;UBERON:0000454,1.80e-17,8;UBERON:0010314,4.72e-15,92;UBERON:0002619,2.22e-13,17;UBERON:0002021,2.42e-12,10;UBERON:0000411,2.42e-12,10;UBERON:0001950,2.42e-12,10;UBERON:0000369,2.23e-11,5;UBERON:0002435,2.23e-11,5;UBERON:0000204,2.23e-11,5;UBERON:0010082,2.23e-11,5;UBERON:0000025,8.71e-11,114;UBERON:0004111,1.27e-09,122;UBERON:0002240,2.64e-09,6;UBERON:0005174,2.64e-09,6;UBERON:0001137,2.64e-09,6;UBERON:0002950,2.79e-09,4;UBERON:0001891,2.79e-09,4;UBERON:0009616,2.79e-09,4;UBERON:0010286,2.79e-09,4;UBERON:0011216,4.24e-08,194;UBERON:0002257,9.93e-08,3;UBERON:0002038,1.10e-07,3;UBERON:0009663,1.10e-07,3;UBERON:0009661,1.10e-07,3;UBERON:0000125,1.10e-07,3;UBERON:0002308,1.10e-07,3;UBERON:0004684,1.16e-07,3;UBERON:0002275,1.16e-07,3;UBERON:0001948,1.18e-07,5;UBERON:0002315,1.18e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,3.64169629547276,9.52183762689659,4.43681982454325,0,0,0,0,0,0,0.384218305321555,2.7996195323289,6.34527910158946,3.36519938162211,0.856952953211411,2.87129103237098,2.9397791811589,3.1629005436018,11.0306254393203,9.91042928994498,2.42605942361857,3.22573719838111,3.29715719325485,3.20206752608434,6.77187381723788,4.18774498502071,3.37657566019008,2.90316670775939,4.12480019663135,6.83384067835694,2.23679334990361,0.075726193333184,0,0,0,0,0,0,0,0,0,0.259786004602869,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0.301445281105245,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0.878342391034642,2.72280718857492,0,0,0,0,1.3481157546434,1.37250180845588,3.14135880282161,0.869121600961382,1.02286182932132,0.83115217823824,1.1356888414743,0,0,0,0,0.130120442962704,0,0.360124259610698,0.753524089178575,0.136072998302656,0.896796041993948,0.937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0.92614151141356,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.820481806145422,0,0,0,0,0.215423397732799,0,0.222798674082394,0.283076530788832,0,0,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.258717367565509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0.108005340821801,0.209088296014469,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,1.84130094602871,1.14579102687879,4.98374228796694,1.37016503954128,3.7769694869485,2.70009000092722,1.80128481289688,0.453142408984205,0,1.764384908931,0.399024873401031,0.512200817262403,0.486213434136588,0.209613162627982,0.183843508450014,0.44449345560323,0.412070114477788,0.320919209591815,0.252697211763798,0.25347929989024,0.377252682772152,0.280924522409647,0.448176066834085,0.17230640686684,0,0.463537303779422,0,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0.290692833264657,0.470546902076653,0.423073039458382,0,1.31534855718921,0,1.12228454331548,0.474540072496697,0.394017929502254,1.22769312950907,0.464810523557898,0,0,0,0.429742108096597,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,3.64169629547276,9.52183762689659,4.43681982454325,0,0,0,0,0,0,0.384218305321555,2.7996195323289,6.34527910158946,3.36519938162211,0.856952953211411,2.87129103237098,2.9397791811589,3.1629005436018,11.0306254393203,9.91042928994498,2.42605942361857,3.22573719838111,3.29715719325485,3.20206752608434,6.77187381723788,4.18774498502071,3.37657566019008,2.90316670775939,4.12480019663135,6.83384067835694,2.23679334990361,0.075726193333184,0,0,0,0,0,0,0,0,0,0.259786004602869,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0.301445281105245,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0.878342391034642,2.72280718857492,0,0,0,0,1.3481157546434,1.37250180845588,3.14135880282161,0.869121600961382,1.02286182932132,0.83115217823824,1.1356888414743,0,0,0,0,0.130120442962704,0,0.360124259610698,0.753524089178575,0.136072998302656,0.896796041993948,0.937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0.92614151141356,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.820481806145422,0,0,0,0,0.215423397732799,0,0.222798674082394,0.283076530788832,0,0,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.258717367565509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0.108005340821801,0.209088296014469,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,1.84130094602871,1.14579102687879,4.98374228796694,1.37016503954128,3.7769694869485,2.70009000092722,1.80128481289688,0.453142408984205,0,1.764384908931,0.399024873401031,0.512200817262403,0.486213434136588,0.209613162627982,0.183843508450014,0.44449345560323,0.412070114477788,0.320919209591815,0.252697211763798,0.25347929989024,0.377252682772152,0.280924522409647,0.448176066834085,0.17230640686684,0,0.463537303779422,0,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0.290692833264657,0.470546902076653,0.423073039458382,0,1.31534855718921,0,1.12228454331548,0.474540072496697,0.394017929502254,1.22769312950907,0.464810523557898,0,0,0,0.429742108096597,0,0,0 | ||
|short_description=p@chr9:21822045..21822064,+ | |short_description=p@chr9:21822045..21822064,+ | ||
}} | }} |
Latest revision as of 22:16, 4 August 2015
Short description: | p@chr9:21822045..21822064, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:21822045..21822064, + |
Coexpression cluster: | MCL_coexpression_mm9:1995 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.59e-45 | 23 |
neuroblast (sensu Vertebrata) | 1.59e-45 | 23 |
neuron | 5.51e-30 | 33 |
neuronal stem cell | 5.51e-30 | 33 |
neuroblast | 5.51e-30 | 33 |
electrically signaling cell | 5.51e-30 | 33 |
electrically responsive cell | 1.72e-24 | 39 |
electrically active cell | 1.72e-24 | 39 |
neural cell | 1.11e-21 | 43 |
ectodermal cell | 4.64e-21 | 44 |
neurectodermal cell | 4.64e-21 | 44 |
neuron of cerebral cortex | 7.51e-14 | 6 |
embryonic cell | 3.65e-11 | 70 |
granule cell | 3.87e-08 | 3 |
striatum neuron | 8.08e-08 | 3 |
hippocampal neuron | 8.96e-08 | 3 |
neuron of the ventral spinal cord | 9.93e-08 | 3 |
neuron of the substantia nigra | 1.10e-07 | 3 |
raphe nuclei neuron | 1.16e-07 | 3 |
somatic stem cell | 2.34e-07 | 91 |
multi fate stem cell | 2.34e-07 | 91 |