FFCP PHASE1:Hg19::chr11:124628392..124628427,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:124628392..124628427,-
|short_description=p@chr11:124628392..124628427,-
|description=CAGE_peak_at_chr11:124628392..124628427,-
|association_with_transcri...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:124628392..124628427,- | |||
|coexpression_cluster_id=C3111 | |||
|description=CAGE_peak_at_chr11:124628392..124628427,- | |||
|id=chr11:124628392..124628427,- | |||
|ontology_enrichment_celltype=CL:0000115!1.12e-24!35;CL:0002139!6.53e-20!24;CL:0002078!1.60e-18!44;CL:0000071!1.00e-13!18;CL:0002546!1.00e-13!18;CL:0000213!4.16e-13!57;CL:0000215!4.16e-13!57;CL:1000413!6.24e-11!9;CL:1000612!3.37e-10!7;CL:1000746!3.37e-10!7;CL:0005020!6.08e-08!6;CL:0002138!6.08e-08!6;CL:0005022!6.08e-08!6;CL:0002544!7.39e-08!6;CL:0002262!3.26e-07!2;CL:1000398!3.26e-07!2;CL:0000666!4.47e-07!4;CL:0002188!4.47e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000115;3.67e-52;36!CL:0002262;3.63e-32;2!CL:1000398;3.63e-32;2!CL:0002139;1.80e-30;24!CL:0002078;3.95e-29;45!CL:0002188;3.84e-28;5!CL:0002138;1.11e-23;6!CL:0000213;1.40e-20;58!CL:0000215;1.40e-20;58!CL:1000746;2.56e-20;7!CL:1000612;2.56e-20;7!CL:0000071;1.07e-13;18!CL:0002681;3.95e-12;12!CL:0002584;3.95e-12;12!CL:0002543;4.84e-11;6!CL:0002544;5.64e-11;6!CL:1000449;8.02e-10;15!CL:0002545;7.79e-09;2!CL:1000497;9.87e-09;17!CL:0002518;9.87e-09;17!CL:1000413;1.29e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.03e-59,36;CL:0002078,1.28e-47,45;CL:0000213,9.20e-37,58;CL:0000215,9.20e-37,58;CL:0002262,3.92e-32,2;CL:1000398,3.92e-32,2;CL:0002139,1.93e-30,24;CL:0002188,3.34e-28,5;CL:0005020,1.07e-23,6;CL:0002138,1.07e-23,6;CL:0005022,1.07e-23,6;CL:1000746,2.32e-20,7;CL:1000612,2.32e-20,7;CL:0000222,3.98e-17,121;CL:0000071,1.15e-13,18;CL:0002546,1.15e-13,18;CL:0002681,3.73e-12,12;CL:0002584,3.73e-12,12;CL:0002543,5.09e-11,6;CL:0002544,5.93e-11,6;CL:1000449,7.67e-10,15;CL:0002545,7.49e-09,2;CL:1000497,9.48e-09,17;CL:0002518,9.48e-09,17;CL:0002321,1.29e-07,250;CL:1000413,1.33e-07,9;CL:0000066,1.39e-07,253 | |||
|ontology_enrichment_development_v019=CL:0005022;1.11e-23;6!CL:0002546;1.07e-13;18!CL:0000222;2.86e-10;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.65e-14!115;UBERON:0001986!1.00e-13!18;UBERON:0004638!1.00e-13!18;UBERON:0004852!1.00e-13!18;UBERON:0003915!6.24e-11!9;UBERON:0004700!6.24e-11!9;UBERON:0001917!6.24e-11!9;UBERON:0000487!8.02e-11!22;UBERON:0000074!3.37e-10!7;UBERON:0001229!3.37e-10!7;UBERON:0001230!3.37e-10!7;UBERON:0005749!3.37e-10!7;UBERON:0004199!3.37e-10!7;UBERON:0004209!3.37e-10!7;UBERON:0004198!3.37e-10!7;UBERON:0006914!2.92e-09!25;UBERON:0000055!1.06e-08!69;UBERON:0004111!4.97e-08!241;UBERON:0000353!1.71e-07!17;UBERON:0002049!4.72e-07!79;UBERON:0007798!4.72e-07!79;UBERON:0003887!6.21e-07!21;UBERON:0004872!7.70e-07!84;UBERON:0000477!8.05e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0001281;3.63e-32;2!UBERON:0003497;3.63e-32;2!UBERON:0003909;3.63e-32;2!UBERON:0003835;3.63e-32;2!UBERON:0000353;9.97e-26;15!UBERON:0001280;8.09e-22;3!UBERON:0004647;8.09e-22;3!UBERON:0000074;2.56e-20;7!UBERON:0001229;2.56e-20;7!UBERON:0001473;6.08e-18;8!UBERON:0004536;6.08e-18;8!UBERON:0006558;6.08e-18;8!UBERON:0002465;1.73e-14;10!UBERON:0004638;1.07e-13;18!UBERON:0001986;1.07e-13;18!UBERON:0004852;1.07e-13;18!UBERON:0001225;3.95e-12;12!UBERON:0008987;3.95e-12;12!UBERON:0000487;2.90e-11;22!UBERON:0000055;3.90e-10;65!UBERON:0006914;6.02e-10;25!UBERON:0003513;6.55e-10;7!UBERON:0001851;8.02e-10;15!UBERON:0006555;8.02e-10;15!UBERON:0004819;8.02e-10;15!UBERON:0001285;8.02e-10;15!UBERON:0007684;8.02e-10;15!UBERON:0005800;7.79e-09;2!UBERON:0001515;7.79e-09;2!UBERON:0001638;1.17e-07;9!UBERON:0003920;1.17e-07;9!UBERON:0004582;1.17e-07;9!UBERON:0003915;1.29e-07;9!UBERON:0004700;1.29e-07;9!UBERON:0001917;1.29e-07;9!UBERON:0000490;2.34e-07;33!UBERON:0003914;6.12e-07;74!UBERON:0002049;7.81e-07;75!UBERON:0007798;7.81e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001281,3.92e-32,2;UBERON:0003497,3.92e-32,2;UBERON:0003909,3.92e-32,2;UBERON:0003835,3.92e-32,2;UBERON:0000353,9.47e-26,15;UBERON:0001280,8.53e-22,3;UBERON:0004647,8.53e-22,3;UBERON:0005171,8.53e-22,3;UBERON:0010532,2.32e-20,7;UBERON:0000074,2.32e-20,7;UBERON:0001229,2.32e-20,7;UBERON:0001230,2.32e-20,7;UBERON:0003220,2.32e-20,7;UBERON:0005749,2.32e-20,7;UBERON:0004199,2.32e-20,7;UBERON:0004209,2.32e-20,7;UBERON:0004198,2.32e-20,7;UBERON:0000058,2.33e-20,19;UBERON:0001473,5.91e-18,8;UBERON:0004536,5.91e-18,8;UBERON:0006558,5.91e-18,8;UBERON:0005103,6.63e-18,8;UBERON:0000083,6.63e-18,8;UBERON:0009201,6.63e-18,8;UBERON:0006553,6.63e-18,8;UBERON:0003074,6.63e-18,8;UBERON:0003060,6.63e-18,8;UBERON:0000055,2.14e-17,68;UBERON:0000080,5.43e-16,9;UBERON:0002120,5.43e-16,9;UBERON:0004875,5.43e-16,9;UBERON:0005721,5.43e-16,9;UBERON:0005754,5.43e-16,9;UBERON:0007297,5.43e-16,9;UBERON:0002049,4.54e-15,78;UBERON:0007798,4.54e-15,78;UBERON:0002465,1.69e-14,10;UBERON:0004638,1.15e-13,18;UBERON:0001986,1.15e-13,18;UBERON:0004852,1.15e-13,18;UBERON:0004876,3.34e-13,11;UBERON:0001225,3.73e-12,12;UBERON:0008987,3.73e-12,12;UBERON:0003887,3.73e-12,12;UBERON:0002394,2.13e-11,6;UBERON:0003928,2.13e-11,6;UBERON:0000487,3.06e-11,22;UBERON:0004535,1.48e-10,109;UBERON:0001009,3.00e-10,112;UBERON:0006914,6.31e-10,25;UBERON:0003513,6.69e-10,7;UBERON:0001851,7.67e-10,15;UBERON:0004211,7.67e-10,15;UBERON:0009773,7.67e-10,15;UBERON:0001231,7.67e-10,15;UBERON:0001285,7.67e-10,15;UBERON:0007684,7.67e-10,15;UBERON:0004208,7.67e-10,15;UBERON:0003914,9.15e-10,117;UBERON:0006555,2.91e-09,16;UBERON:0004819,2.91e-09,16;UBERON:0007500,4.63e-09,59;UBERON:0001981,4.63e-09,59;UBERON:0004537,4.63e-09,59;UBERON:0006965,4.63e-09,59;UBERON:0005800,7.49e-09,2;UBERON:0001515,7.49e-09,2;UBERON:0004111,5.05e-08,240;UBERON:0002294,6.77e-08,9;UBERON:0001173,6.77e-08,9;UBERON:0004912,6.77e-08,9;UBERON:0001638,1.20e-07,9;UBERON:0003920,1.20e-07,9;UBERON:0004582,1.20e-07,9;UBERON:0003915,1.33e-07,9;UBERON:0004700,1.33e-07,9;UBERON:0001917,1.33e-07,9;UBERON:0005172,3.62e-07,54;UBERON:0005173,3.62e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.324547393654683,0.348259474598534,0,0,0,0,0.596287222100115,0,0.347140501607594,1.13061588384802,0.419499436209906,0,0.835979866147242,3.6178346283706,3.20189636418039,3.68192674041137,0,0,0.488124115096339,0,1.62028389576352,2.05389375053383,0,0.112611480483322,0,0,1.28241220751285,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8104872739944,7.01208869017229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,3.4120015221269,1.70093705276516,0.215915916102139,7.71136263451447,0.541892875087706,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649243880549111,0,0,0,2.50634477090067,0,0,0,0,0.343505344755765,0,0.223676107892416,0,0,0,0,0.270455678475983,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.824378340616761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0.343972064943233,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0,0,0.669514372325618,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.640724475406168,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0.496211178389294,0,0.255524855279191,0,0,0,0,0.177404740325278,0,0,0.0679697329768317,0,0,0,0.156986185701028,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0.307988420568741,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.128915775947154,0,0,0,0,0.730336388246517,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0,0,0,0.426467963801962,0,0,0,0,0.25458863311266,0,0.217716747896961,0.342233301085281,0,0.0717222053926763,0,0,0,0,0,0,0,0,0.665756774185513,0.402547587182052,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.324547393654683,0.348259474598534,0,0,0,0,0.596287222100115,0,0.347140501607594,1.13061588384802,0.419499436209906,0,0.835979866147242,3.6178346283706,3.20189636418039,3.68192674041137,0,0,0.488124115096339,0,1.62028389576352,2.05389375053383,0,0.112611480483322,0,0,1.28241220751285,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8104872739944,7.01208869017229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,3.4120015221269,1.70093705276516,0.215915916102139,7.71136263451447,0.541892875087706,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649243880549111,0,0,0,2.50634477090067,0,0,0,0,0.343505344755765,0,0.223676107892416,0,0,0,0,0.270455678475983,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.824378340616761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0.343972064943233,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0,0,0.669514372325618,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.640724475406168,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0.496211178389294,0,0.255524855279191,0,0,0,0,0.177404740325278,0,0,0.0679697329768317,0,0,0,0.156986185701028,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0.307988420568741,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.128915775947154,0,0,0,0,0.730336388246517,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0,0,0,0.426467963801962,0,0,0,0,0.25458863311266,0,0.217716747896961,0.342233301085281,0,0.0717222053926763,0,0,0,0,0,0,0,0,0.665756774185513,0.402547587182052,0 | ||
|short_description=p@chr11:124628392..124628427,- | |||
}} | }} |
Latest revision as of 19:34, 23 July 2015
Short description: | p@chr11:124628392..124628427, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:124628392..124628427, - |
Coexpression cluster: | C3111_Hepatic_Endothelial_Renal_acute_lung_kidney_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.03e-59 | 36 |
meso-epithelial cell | 1.28e-47 | 45 |
lining cell | 9.20e-37 | 58 |
barrier cell | 9.20e-37 | 58 |
endothelial cell of sinusoid | 3.92e-32 | 2 |
endothelial cell of hepatic sinusoid | 3.92e-32 | 2 |
endothelial cell of vascular tree | 1.93e-30 | 24 |
glomerular endothelial cell | 3.34e-28 | 5 |
lymphangioblast | 1.07e-23 | 6 |
endothelial cell of lymphatic vessel | 1.07e-23 | 6 |
vascular lymphangioblast | 1.07e-23 | 6 |
glomerular cell | 2.32e-20 | 7 |
kidney corpuscule cell | 2.32e-20 | 7 |
mesodermal cell | 3.98e-17 | 121 |
blood vessel endothelial cell | 1.15e-13 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.15e-13 | 18 |
kidney cortical cell | 3.73e-12 | 12 |
renal cortical epithelial cell | 3.73e-12 | 12 |
vein endothelial cell | 5.09e-11 | 6 |
aortic endothelial cell | 5.93e-11 | 6 |
epithelial cell of nephron | 7.67e-10 | 15 |
thoracic aorta endothelial cell | 7.49e-09 | 2 |
kidney cell | 9.48e-09 | 17 |
kidney epithelial cell | 9.48e-09 | 17 |
embryonic cell | 1.29e-07 | 250 |
endothelial cell of artery | 1.33e-07 | 9 |
epithelial cell | 1.39e-07 | 253 |