FFCP PHASE1:Hg19::chr1:41249474..41249500,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9132 | |EntrezGene=9132 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6298 | |HGNC=6298 | ||
|TSSclassifier=strong | |||
|UniProt=P56696,B3KQH8 | |UniProt=P56696,B3KQH8 | ||
|association_with_transcript=-183bp_to_ENST00000347132,NM_004700,NM_172163,uc001cgh.1,uc001cgi.1_5end | |association_with_transcript=-183bp_to_ENST00000347132,NM_004700,NM_172163,uc001cgh.1,uc001cgi.1_5end | ||
|cluster_id=chr1:41249474..41249500,+ | |||
|description=CAGE_peak_1_at_KCNQ4_5end | |description=CAGE_peak_1_at_KCNQ4_5end | ||
|id=chr1:41249474..41249500,+ | |id=chr1:41249474..41249500,+ | ||
|ontology_enrichment_celltype=CL:0000039!5.49e-07!7;CL:0000586!5.49e-07!7 | |ontology_enrichment_celltype=CL:0000039!5.49e-07!7;CL:0000586!5.49e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0000123;8.52e-08;2!CL:0000242;8.52e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,4.83e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0010122;1.19e-07;2 | |||
|ontology_enrichment_disease=DOID:0050687!7.69e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.00e-36!115;UBERON:0005743!2.05e-16!86;UBERON:0000073!6.41e-16!94;UBERON:0001016!6.41e-16!94;UBERON:0001049!2.14e-14!57;UBERON:0005068!2.14e-14!57;UBERON:0006241!2.14e-14!57;UBERON:0007135!2.14e-14!57;UBERON:0001017!2.87e-14!82;UBERON:0002346!1.50e-13!90;UBERON:0003075!9.65e-13!86;UBERON:0007284!9.65e-13!86;UBERON:0002616!1.42e-11!59;UBERON:0002780!1.46e-11!41;UBERON:0001890!1.46e-11!41;UBERON:0006240!1.46e-11!41;UBERON:0000955!1.86e-11!69;UBERON:0006238!1.86e-11!69;UBERON:0003080!4.46e-11!42;UBERON:0001893!5.55e-11!34;UBERON:0002020!1.39e-10!34;UBERON:0003528!1.39e-10!34;UBERON:0002791!3.33e-10!33;UBERON:0001869!8.97e-10!32;UBERON:0000924!1.94e-09!173;UBERON:0006601!1.94e-09!173;UBERON:0003056!5.47e-09!61;UBERON:0004121!8.59e-09!169;UBERON:0003135!7.95e-08!11;UBERON:0002619!1.09e-07!22;UBERON:0000153!1.22e-07!129;UBERON:0007811!1.22e-07!129;UBERON:0001950!1.34e-07!20;UBERON:0000033!3.79e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.14e-14;34!UBERON:0000369;1.26e-13;4!UBERON:0002435;1.26e-13;4!UBERON:0000204;1.26e-13;4!UBERON:0002791;1.69e-13;32!UBERON:0001869;5.01e-13;32!UBERON:0003528;5.14e-13;34!UBERON:0002020;5.14e-13;34!UBERON:0009663;1.27e-11;7!UBERON:0005383;7.57e-11;3!UBERON:0005382;7.57e-11;3!UBERON:0001950;8.26e-11;20!UBERON:0002780;2.03e-10;41!UBERON:0001890;2.03e-10;41!UBERON:0002619;1.00e-09;22!UBERON:0001017;2.82e-09;75!UBERON:0002420;5.82e-09;9!UBERON:0000125;5.82e-09;9!UBERON:0007245;5.82e-09;9!UBERON:0002308;5.82e-09;9!UBERON:0010009;5.82e-09;9!UBERON:0010011;5.82e-09;9!UBERON:0000454;5.82e-09;9!UBERON:0000200;1.39e-08;6!UBERON:0007023;1.65e-08;114!UBERON:0000956;2.06e-08;25!UBERON:0000203;2.06e-08;25!UBERON:0000073;2.32e-08;53!UBERON:0002616;2.32e-08;53!UBERON:0001873;1.19e-07;2!UBERON:0000955;1.39e-07;68!UBERON:0001016;9.47e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.09e-30,114;UBERON:0001893,2.32e-17,34;UBERON:0001869,2.95e-16,32;UBERON:0002791,4.66e-16,32;UBERON:0002780,8.24e-16,41;UBERON:0001890,8.24e-16,41;UBERON:0003080,8.24e-16,41;UBERON:0006240,8.24e-16,41;UBERON:0000955,4.55e-15,68;UBERON:0006238,4.55e-15,68;UBERON:0000073,5.69e-15,53;UBERON:0002616,5.69e-15,53;UBERON:0003528,5.97e-15,34;UBERON:0002020,5.97e-15,34;UBERON:0001049,5.98e-14,56;UBERON:0005068,5.98e-14,56;UBERON:0006241,5.98e-14,56;UBERON:0007135,5.98e-14,56;UBERON:0000369,6.86e-14,4;UBERON:0002435,6.86e-14,4;UBERON:0000204,6.86e-14,4;UBERON:0010082,6.86e-14,4;UBERON:0001017,3.04e-13,81;UBERON:0001016,8.55e-13,89;UBERON:0009663,1.35e-11,7;UBERON:0003056,5.35e-11,61;UBERON:0001950,6.40e-11,20;UBERON:0005383,6.49e-11,3;UBERON:0005382,6.49e-11,3;UBERON:0003075,1.12e-10,82;UBERON:0007284,1.12e-10,82;UBERON:0002346,5.74e-10,86;UBERON:0002619,7.99e-10,22;UBERON:0010371,1.52e-09,104;UBERON:0002420,6.08e-09,9;UBERON:0000125,6.08e-09,9;UBERON:0007245,6.08e-09,9;UBERON:0002308,6.08e-09,9;UBERON:0010009,6.08e-09,9;UBERON:0010011,6.08e-09,9;UBERON:0000454,6.08e-09,9;UBERON:0000200,1.01e-08,6;UBERON:0000956,1.69e-08,25;UBERON:0000203,1.69e-08,25;UBERON:0001873,8.31e-08,2;UBERON:0010122,8.31e-08,2;UBERON:0004121,5.64e-07,171;UBERON:0000924,5.64e-07,171;UBERON:0006601,5.64e-07,171 | |||
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| ||
|short_description=p1@KCNQ4 | |short_description=p1@KCNQ4 | ||
}} | }} |
Latest revision as of 02:00, 18 September 2015
Short description: | p1@KCNQ4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KCNQ4_5end |
Coexpression cluster: | NA |
Association with transcript: | -183bp_to_ENST00000347132, NM_004700, NM_172163, uc001cgh.1, uc001cgi.1_5end |
EntrezGene: | KCNQ4 |
HGNC: | 6298 |
UniProt: | P56696B3KQH8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 4.83e-08 | 2 |