FFCP PHASE1:Hg19::chr19:42482880..42482902,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:42482880..42482902,+ | |||
|coexpression_cluster_id=C376 | |||
|description=CAGE_peak_at_chr19:42482880..42482902,+ | |description=CAGE_peak_at_chr19:42482880..42482902,+ | ||
|id=chr19:42482880..42482902,+ | |id=chr19:42482880..42482902,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000333;3.41e-07;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.42e-16;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;6.08e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,6.09e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.92e-47!57;UBERON:0005068!1.92e-47!57;UBERON:0006241!1.92e-47!57;UBERON:0007135!1.92e-47!57;UBERON:0005743!2.69e-45!86;UBERON:0000073!5.43e-45!94;UBERON:0001016!5.43e-45!94;UBERON:0001017!2.89e-44!82;UBERON:0000955!2.03e-42!69;UBERON:0006238!2.03e-42!69;UBERON:0002616!1.24e-40!59;UBERON:0002780!2.82e-37!41;UBERON:0001890!2.82e-37!41;UBERON:0006240!2.82e-37!41;UBERON:0002346!4.79e-37!90;UBERON:0003080!3.87e-36!42;UBERON:0003075!4.21e-36!86;UBERON:0007284!4.21e-36!86;UBERON:0001893!3.47e-35!34;UBERON:0001869!4.03e-35!32;UBERON:0002020!8.82e-35!34;UBERON:0003528!8.82e-35!34;UBERON:0007023!1.41e-33!115;UBERON:0002791!1.54e-33!33;UBERON:0001950!3.48e-30!20;UBERON:0002619!1.07e-29!22;UBERON:0003056!1.17e-26!61;UBERON:0000956!1.97e-25!25;UBERON:0000203!1.97e-25!25;UBERON:0000153!8.57e-24!129;UBERON:0007811!8.57e-24!129;UBERON:0000924!9.10e-23!173;UBERON:0006601!9.10e-23!173;UBERON:0000033!1.15e-22!123;UBERON:0004121!9.07e-22!169;UBERON:0003076!4.18e-12!15;UBERON:0003057!4.18e-12!15;UBERON:0000025!2.72e-11!194;UBERON:0002420!6.13e-11!9;UBERON:0007245!6.13e-11!9;UBERON:0010009!6.13e-11!9;UBERON:0010011!6.13e-11!9;UBERON:0000454!6.13e-11!9;UBERON:0000200!7.23e-11!6;UBERON:0002308!1.02e-10!9;UBERON:0000125!1.02e-10!9;UBERON:0004733!1.73e-10!12;UBERON:0002028!1.73e-10!12;UBERON:0007277!1.73e-10!12;UBERON:0001871!3.33e-10!7;UBERON:0004732!1.65e-09!13;UBERON:0001872!2.88e-09!5;UBERON:0002021!3.83e-09!5;UBERON:0009663!3.71e-08!7;UBERON:0004111!4.16e-08!241;UBERON:0000064!6.09e-08!219;UBERON:0000369!1.73e-07!4;UBERON:0002435!1.73e-07!4;UBERON:0000204!1.73e-07!4;UBERON:0010082!1.73e-07!4;UBERON:0002298!1.99e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;7.04e-40;20!UBERON:0002619;4.33e-36;22!UBERON:0001893;1.15e-33;34!UBERON:0001869;4.64e-32;32!UBERON:0000956;1.68e-31;25!UBERON:0000203;1.68e-31;25!UBERON:0000073;8.62e-30;53!UBERON:0002616;8.62e-30;53!UBERON:0002791;8.97e-29;32!UBERON:0003528;1.14e-26;34!UBERON:0002020;1.14e-26;34!UBERON:0002780;1.89e-26;41!UBERON:0001890;1.89e-26;41!UBERON:0000955;4.12e-26;68!UBERON:0001017;8.67e-21;75!UBERON:0001016;1.02e-19;83!UBERON:0001872;2.92e-13;5!UBERON:0002021;5.38e-13;5!UBERON:0001896;4.92e-12;3!UBERON:0005290;4.92e-12;3!UBERON:0004733;2.05e-11;12!UBERON:0002028;2.05e-11;12!UBERON:0000200;2.98e-11;6!UBERON:0002298;1.16e-10;6!UBERON:0004732;1.74e-10;13!UBERON:0007023;9.79e-10;114!UBERON:0001871;2.40e-09;6!UBERON:0011216;7.86e-08;132!UBERON:0000013;3.41e-07;5!UBERON:0002410;3.41e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,9.42e-54,89;UBERON:0001049,5.57e-52,56;UBERON:0005068,5.57e-52,56;UBERON:0006241,5.57e-52,56;UBERON:0007135,5.57e-52,56;UBERON:0000073,3.11e-51,53;UBERON:0002616,3.11e-51,53;UBERON:0000955,5.10e-51,68;UBERON:0006238,5.10e-51,68;UBERON:0001017,7.69e-51,81;UBERON:0002780,6.54e-41,41;UBERON:0001890,6.54e-41,41;UBERON:0003080,6.54e-41,41;UBERON:0006240,6.54e-41,41;UBERON:0001950,4.22e-40,20;UBERON:0002346,4.18e-39,86;UBERON:0003075,1.05e-38,82;UBERON:0007284,1.05e-38,82;UBERON:0001893,4.70e-37,34;UBERON:0002619,2.72e-36,22;UBERON:0001869,1.34e-35,32;UBERON:0007023,4.66e-32,114;UBERON:0000956,1.12e-31,25;UBERON:0000203,1.12e-31,25;UBERON:0002791,1.95e-31,32;UBERON:0003056,3.05e-31,61;UBERON:0003528,2.14e-29,34;UBERON:0002020,2.14e-29,34;UBERON:0010371,5.45e-29,104;UBERON:0004121,1.93e-27,171;UBERON:0000924,1.93e-27,171;UBERON:0006601,1.93e-27,171;UBERON:0010314,2.56e-26,132;UBERON:0011216,3.50e-20,223;UBERON:0000025,2.40e-13,192;UBERON:0001872,2.42e-13,5;UBERON:0002021,4.99e-13,5;UBERON:0003076,5.76e-12,15;UBERON:0003057,5.76e-12,15;UBERON:0001896,9.80e-12,3;UBERON:0005290,9.80e-12,3;UBERON:0010096,9.80e-12,3;UBERON:0000200,2.29e-11,6;UBERON:0004733,3.10e-11,12;UBERON:0002028,3.10e-11,12;UBERON:0007277,3.10e-11,12;UBERON:0002298,1.90e-10,6;UBERON:0004732,2.55e-10,13;UBERON:0001871,2.00e-09,6;UBERON:0004111,3.23e-09,240;UBERON:0000013,3.41e-07,5;UBERON:0002410,3.41e-07,5;UBERON:0000483,5.83e-07,306;UBERON:0000119,8.02e-07,309 | |||
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|short_description=p@chr19:42482880..42482902,+ | |short_description=p@chr19:42482880..42482902,+ | ||
}} | }} |
Latest revision as of 08:45, 26 July 2015
Short description: | p@chr19:42482880..42482902, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:42482880..42482902, + |
Coexpression cluster: | C376_brain_temporal_insula_frontal_occipital_postcentral_paracentral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 6.09e-09 | 2 |