FFCP PHASE1:Hg19::chr12:56546363..56546397,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:56546363..56546397,+
|short_description=p1@MYL6B
|description=CAGE_peak_1_at_MYL6B_5end
|association_with_transcript=0bp_to_ENST00000405661,ENST0000055183...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=140465 | |EntrezGene=140465 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29823 | |HGNC=29823 | ||
|TSSclassifier=strong | |||
|UniProt=F8VSA2,F8W1I5 | |UniProt=F8VSA2,F8W1I5 | ||
|association_with_transcript=0bp_to_ENST00000405661,ENST00000551834,ENST00000552568_5end | |||
|cluster_id=chr12:56546363..56546397,+ | |||
|coexpression_cluster_id=C3301 | |||
|description=CAGE_peak_1_at_MYL6B_5end | |||
|id=chr12:56546363..56546397,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.83e-22!180;CL:0002321!2.53e-20!248;CL:0000393!2.93e-20!60;CL:0000211!2.93e-20!60;CL:0000183!4.20e-20!59;CL:0000220!1.13e-19!246;CL:0000222!4.98e-18!119;CL:0000187!2.46e-17!54;CL:0000680!4.00e-17!57;CL:0000056!4.00e-17!57;CL:0000355!4.00e-17!57;CL:0000192!4.90e-14!42;CL:0000514!4.90e-14!42;CL:0000359!8.28e-11!32;CL:0000133!2.34e-10!59;CL:0000221!4.35e-09!71;CL:0000333!9.34e-09!41;CL:0000115!3.02e-07!35;CL:0002078!4.87e-07!44;CL:0002139!9.60e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000393;5.02e-11;61!CL:0000211;5.02e-11;61!CL:0000359;3.46e-10;32!CL:0000192;4.68e-10;43!CL:0000187;5.08e-10;55!CL:0002139;9.98e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,5.87e-21,250;CL:0000393,1.38e-20,61;CL:0000211,1.38e-20,61;CL:0000222,1.16e-18,121;CL:0000187,1.17e-17,55;CL:0000680,1.91e-17,58;CL:0000056,1.91e-17,58;CL:0000355,1.91e-17,58;CL:0000192,2.38e-14,43;CL:0000514,2.38e-14,43;CL:0000359,8.24e-11,32;CL:0000133,2.33e-10,59;CL:0000221,1.92e-09,72;CL:0000333,9.30e-09,41;CL:0000115,1.50e-07,36;CL:0002078,2.52e-07,45;CL:0002139,9.57e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000514;4.68e-10;43!CL:0000355;1.05e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;2.37e-08;32!UBERON:0000956;2.87e-08;25!UBERON:0000203;2.87e-08;25!UBERON:0002791;1.12e-07;32!UBERON:0003914;1.25e-07;74!UBERON:0003528;1.27e-07;34!UBERON:0002020;1.27e-07;34!UBERON:0002049;1.48e-07;75!UBERON:0007798;1.48e-07;75!UBERON:0000970;1.69e-07;20!UBERON:0001893;1.72e-07;34!UBERON:0000019;1.89e-07;19!UBERON:0000047;1.89e-07;19!UBERON:0004088;1.89e-07;19!UBERON:0010230;1.89e-07;19!UBERON:0007500;3.06e-07;56!UBERON:0001981;3.06e-07;56!UBERON:0004537;3.06e-07;56!UBERON:0000020;4.38e-07;23!UBERON:0002619;6.15e-07;22!UBERON:0001456;6.81e-07;21!UBERON:0002104;8.44e-07;21!UBERON:0001637;8.49e-07;42!UBERON:0003509;8.49e-07;42!UBERON:0004572;8.49e-07;42 | |||
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| ||
|short_description=p1@MYL6B | |||
}} | }} |
Latest revision as of 09:58, 19 September 2015
Short description: | p1@MYL6B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MYL6B_5end |
Coexpression cluster: | C3301_Renal_Placental_Mesenchymal_Pericytes_Osteoblast_Astrocyte_Nucleus |
Association with transcript: | 0bp_to_ENST00000405661, ENST00000551834, ENST00000552568_5end |
EntrezGene: | MYL6B |
HGNC: | 29823 |
UniProt: | F8VSA2F8W1I5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 5.87e-21 | 250 |
electrically responsive cell | 1.38e-20 | 61 |
electrically active cell | 1.38e-20 | 61 |
mesodermal cell | 1.16e-18 | 121 |
muscle cell | 1.17e-17 | 55 |
muscle precursor cell | 1.91e-17 | 58 |
myoblast | 1.91e-17 | 58 |
multi-potent skeletal muscle stem cell | 1.91e-17 | 58 |
smooth muscle cell | 2.38e-14 | 43 |
smooth muscle myoblast | 2.38e-14 | 43 |
vascular associated smooth muscle cell | 8.24e-11 | 32 |
neurectodermal cell | 2.33e-10 | 59 |
ectodermal cell | 1.92e-09 | 72 |
migratory neural crest cell | 9.30e-09 | 41 |
endothelial cell | 1.50e-07 | 36 |
meso-epithelial cell | 2.52e-07 | 45 |
endothelial cell of vascular tree | 9.57e-07 | 24 |