FFCP PHASE1:Hg19::chr5:52096217..52096226,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=53918 | |EntrezGene=53918 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=8829 | |HGNC=8829 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_DQ892950,DQ896198_5end | |association_with_transcript=0bp_to_DQ892950,DQ896198_5end | ||
|cluster_id=chr5:52096217..52096226,+ | |||
|description=CAGE_peak_11_at_PELO_5end | |description=CAGE_peak_11_at_PELO_5end | ||
|id=chr5:52096217..52096226,+ | |id=chr5:52096217..52096226,+ | ||
|ontology_enrichment_celltype=CL:0000222!7.05e-13!119;CL:0000115!4.35e-11!35;CL:0002139!4.46e-10!24;CL:0000213!3.01e-09!57;CL:0000215!3.01e-09!57;CL:0000192!2.24e-08!42;CL:0000514!2.24e-08!42;CL:0000071!2.88e-08!18;CL:0002546!2.88e-08!18;CL:1000413!6.28e-08!9;CL:0000183!2.85e-07!59;CL:0002078!5.53e-07!44 | |ontology_enrichment_celltype=CL:0000222!7.05e-13!119;CL:0000115!4.35e-11!35;CL:0002139!4.46e-10!24;CL:0000213!3.01e-09!57;CL:0000215!3.01e-09!57;CL:0000192!2.24e-08!42;CL:0000514!2.24e-08!42;CL:0000071!2.88e-08!18;CL:0002546!2.88e-08!18;CL:1000413!6.28e-08!9;CL:0000183!2.85e-07!59;CL:0002078!5.53e-07!44 | ||
|ontology_enrichment_celltype_v019=CL:0002504;5.23e-21;3!CL:1000279;5.23e-21;3!CL:1000280;5.23e-21;3!CL:1000746;2.09e-15;7!CL:1000612;2.09e-15;7!CL:0002195;2.89e-15;2!CL:0002571;2.89e-15;2!CL:0002262;1.19e-14;2!CL:1000398;1.19e-14;2!CL:0002188;1.32e-12;5!CL:0002590;1.07e-09;3!CL:0000182;4.15e-09;12!CL:0002681;4.71e-09;12!CL:0002584;4.71e-09;12!CL:0002599;2.80e-08;1!CL:0002581;6.85e-08;1!CL:1000449;2.90e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002504,7.12e-21,3;CL:1000279,7.12e-21,3;CL:1000280,7.12e-21,3;CL:1000746,2.35e-15,7;CL:1000612,2.35e-15,7;CL:0002195,2.80e-15,2;CL:0002571,2.80e-15,2;CL:0002262,9.10e-15,2;CL:1000398,9.10e-15,2;CL:0002188,1.06e-12,5;CL:0002590,8.58e-10,3;CL:0000222,1.67e-09,121;CL:0000182,4.15e-09,12;CL:0002681,5.03e-09,12;CL:0002584,5.03e-09,12;CL:0002599,2.90e-08,1;CL:0002581,4.40e-08,1;CL:1000449,3.06e-07,15;CL:0000192,8.73e-07,43;CL:0000514,8.73e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!3.02e-17!118;UBERON:0004872!1.96e-16!84;UBERON:0002049!1.47e-15!79;UBERON:0007798!1.47e-15!79;UBERON:0004535!2.13e-14!110;UBERON:0000490!7.46e-14!138;UBERON:0001009!1.92e-13!113;UBERON:0000055!5.19e-12!69;UBERON:0000477!1.58e-11!286;UBERON:0001981!1.87e-11!60;UBERON:0007500!1.87e-11!60;UBERON:0004537!1.87e-11!60;UBERON:0006965!1.87e-11!60;UBERON:0000926!5.41e-10!448;UBERON:0004120!5.41e-10!448;UBERON:0006603!5.41e-10!448;UBERON:0000025!1.78e-08!194;UBERON:0001986!2.88e-08!18;UBERON:0004638!2.88e-08!18;UBERON:0004852!2.88e-08!18;UBERON:0001048!4.98e-08!168;UBERON:0001637!5.11e-08!42;UBERON:0003509!5.11e-08!42;UBERON:0004572!5.11e-08!42;UBERON:0000487!5.50e-08!22;UBERON:0003915!6.28e-08!9;UBERON:0004700!6.28e-08!9;UBERON:0001917!6.28e-08!9;UBERON:0004111!1.84e-07!241;UBERON:0000119!2.26e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.36e-21;19!UBERON:0006925;1.36e-21;19!UBERON:0002423;3.83e-16;25!UBERON:0000353;1.37e-15;15!UBERON:0000074;2.09e-15;7!UBERON:0001229;2.09e-15;7!UBERON:0001281;1.19e-14;2!UBERON:0003497;1.19e-14;2!UBERON:0003909;1.19e-14;2!UBERON:0003835;1.19e-14;2!UBERON:0005172;2.18e-12;52!UBERON:0005173;2.18e-12;52!UBERON:0002365;2.39e-12;31!UBERON:0002330;2.39e-12;31!UBERON:0002368;3.89e-12;33!UBERON:0002417;4.15e-12;58!UBERON:0000916;4.15e-12;58!UBERON:0001280;4.57e-10;3!UBERON:0004647;4.57e-10;3!UBERON:0003513;3.20e-09;7!UBERON:0001225;4.71e-09;12!UBERON:0008987;4.71e-09;12!UBERON:0001155;2.45e-07;9!UBERON:0001851;2.90e-07;15!UBERON:0006555;2.90e-07;15!UBERON:0004819;2.90e-07;15!UBERON:0001285;2.90e-07;15!UBERON:0007684;2.90e-07;15!UBERON:0000949;3.86e-07;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.08e-21,19;UBERON:0006925,1.08e-21,19;UBERON:0008836,1.08e-21,19;UBERON:0008835,1.39e-18,22;UBERON:0003894,1.39e-18,22;UBERON:0005172,2.17e-18,54;UBERON:0005173,2.17e-18,54;UBERON:0005256,5.75e-18,122;UBERON:0009854,9.99e-18,23;UBERON:0002417,2.65e-16,60;UBERON:0000916,2.65e-16,60;UBERON:0007499,3.22e-16,25;UBERON:0009497,3.22e-16,25;UBERON:0000015,3.22e-16,25;UBERON:0002423,3.22e-16,25;UBERON:0006235,3.22e-16,25;UBERON:0004161,3.22e-16,25;UBERON:0000353,1.34e-15,15;UBERON:0009856,1.50e-15,26;UBERON:0010532,2.35e-15,7;UBERON:0000074,2.35e-15,7;UBERON:0001229,2.35e-15,7;UBERON:0001230,2.35e-15,7;UBERON:0003220,2.35e-15,7;UBERON:0005749,2.35e-15,7;UBERON:0004199,2.35e-15,7;UBERON:0004209,2.35e-15,7;UBERON:0004198,2.35e-15,7;UBERON:0001281,9.10e-15,2;UBERON:0003497,9.10e-15,2;UBERON:0003909,9.10e-15,2;UBERON:0003835,9.10e-15,2;UBERON:0003104,2.87e-14,160;UBERON:0009142,2.87e-14,160;UBERON:0005103,1.84e-13,8;UBERON:0000083,1.84e-13,8;UBERON:0009201,1.84e-13,8;UBERON:0006553,1.84e-13,8;UBERON:0003074,1.84e-13,8;UBERON:0003060,1.84e-13,8;UBERON:0002365,7.36e-13,31;UBERON:0002330,7.36e-13,31;UBERON:0000058,3.28e-12,19;UBERON:0000080,5.52e-12,9;UBERON:0002120,5.52e-12,9;UBERON:0004875,5.52e-12,9;UBERON:0005721,5.52e-12,9;UBERON:0005754,5.52e-12,9;UBERON:0007297,5.52e-12,9;UBERON:0003914,2.01e-11,117;UBERON:0002368,2.93e-11,35;UBERON:0000490,4.16e-11,148;UBERON:0002100,1.15e-10,199;UBERON:0009569,1.97e-10,112;UBERON:0005177,2.99e-10,101;UBERON:0001280,3.82e-10,3;UBERON:0004647,3.82e-10,3;UBERON:0005171,3.82e-10,3;UBERON:0007503,5.10e-10,78;UBERON:0004876,7.82e-10,11;UBERON:0003513,3.44e-09,7;UBERON:0001225,5.03e-09,12;UBERON:0008987,5.03e-09,12;UBERON:0003887,5.03e-09,12;UBERON:0003929,9.03e-09,54;UBERON:0000949,1.67e-08,45;UBERON:0001155,2.70e-07,9;UBERON:0001851,3.06e-07,15;UBERON:0004211,3.06e-07,15;UBERON:0009773,3.06e-07,15;UBERON:0001231,3.06e-07,15;UBERON:0001285,3.06e-07,15;UBERON:0007684,3.06e-07,15;UBERON:0004208,3.06e-07,15;UBERON:0004921,3.79e-07,118;UBERON:0000483,3.96e-07,306;UBERON:0000119,5.13e-07,309;UBERON:0006555,8.56e-07,16;UBERON:0004819,8.56e-07,16 | |||
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| ||
|short_description=p11@PELO | |short_description=p11@PELO | ||
}} | }} |
Latest revision as of 02:28, 18 September 2015
Short description: | p11@PELO |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_PELO_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_DQ892950, DQ896198_5end |
EntrezGene: | PELO |
HGNC: | 8829 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
enteric smooth muscle cell | 7.12e-21 | 3 |
smooth muscle cell of large intestine | 7.12e-21 | 3 |
smooth muscle cell of colon | 7.12e-21 | 3 |
glomerular cell | 2.35e-15 | 7 |
kidney corpuscule cell | 2.35e-15 | 7 |
hepatic stem cell | 2.80e-15 | 2 |
hepatic mesenchymal stem cell | 2.80e-15 | 2 |
endothelial cell of sinusoid | 9.10e-15 | 2 |
endothelial cell of hepatic sinusoid | 9.10e-15 | 2 |
glomerular endothelial cell | 1.06e-12 | 5 |
smooth muscle cell of the brain vasculature | 8.58e-10 | 3 |
mesodermal cell | 1.67e-09 | 121 |
hepatocyte | 4.15e-09 | 12 |
kidney cortical cell | 5.03e-09 | 12 |
renal cortical epithelial cell | 5.03e-09 | 12 |
smooth muscle cell of the esophagus | 2.90e-08 | 1 |
perirenal preadipocyte | 4.40e-08 | 1 |
epithelial cell of nephron | 3.06e-07 | 15 |
smooth muscle cell | 8.73e-07 | 43 |
smooth muscle myoblast | 8.73e-07 | 43 |