FFCP PHASE1:Hg19::chr14:103988714..103988719,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:103988714..103988719,-
|short_description=p18@CKB
|description=CAGE_peak_18_at_CKB_5end
|association_with_transcript=-75bp_to_ENST00000557287_5end
|Entre...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1152 | |EntrezGene=1152 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1991 | |HGNC=1991 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-75bp_to_ENST00000557287_5end | |||
|cluster_id=chr14:103988714..103988719,- | |||
|description=CAGE_peak_18_at_CKB_5end | |||
|id=chr14:103988714..103988719,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002605;1.01e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,1.78e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.86e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.10e-31!57;UBERON:0005068!1.10e-31!57;UBERON:0006241!1.10e-31!57;UBERON:0007135!1.10e-31!57;UBERON:0005743!1.25e-29!86;UBERON:0001017!1.66e-29!82;UBERON:0002616!3.08e-28!59;UBERON:0000073!3.49e-28!94;UBERON:0001016!3.49e-28!94;UBERON:0002020!5.97e-27!34;UBERON:0003528!5.97e-27!34;UBERON:0002780!8.88e-27!41;UBERON:0001890!8.88e-27!41;UBERON:0006240!8.88e-27!41;UBERON:0001893!6.95e-26!34;UBERON:0003080!7.88e-26!42;UBERON:0003075!1.25e-25!86;UBERON:0007284!1.25e-25!86;UBERON:0002791!3.77e-25!33;UBERON:0001869!3.90e-25!32;UBERON:0000955!4.73e-25!69;UBERON:0006238!4.73e-25!69;UBERON:0002346!1.16e-24!90;UBERON:0007023!2.46e-22!115;UBERON:0003056!1.67e-20!61;UBERON:0000956!7.09e-19!25;UBERON:0000203!7.09e-19!25;UBERON:0004121!9.76e-18!169;UBERON:0000924!1.94e-17!173;UBERON:0006601!1.94e-17!173;UBERON:0001950!3.46e-16!20;UBERON:0002619!4.00e-16!22;UBERON:0000033!1.86e-14!123;UBERON:0000153!1.33e-13!129;UBERON:0007811!1.33e-13!129;UBERON:0000064!5.00e-12!219;UBERON:0002308!1.33e-09!9;UBERON:0000125!1.33e-09!9;UBERON:0000481!3.47e-09!347;UBERON:0002420!5.15e-09!9;UBERON:0007245!5.15e-09!9;UBERON:0010009!5.15e-09!9;UBERON:0010011!5.15e-09!9;UBERON:0000454!5.15e-09!9;UBERON:0000922!2.36e-08!612;UBERON:0000062!2.53e-08!511;UBERON:0004733!9.36e-08!12;UBERON:0002028!9.36e-08!12;UBERON:0007277!9.36e-08!12;UBERON:0001737!1.38e-07!9;UBERON:0009663!1.67e-07!7;UBERON:0000200!2.24e-07!6;UBERON:0003076!3.75e-07!15;UBERON:0003057!3.75e-07!15;UBERON:0004732!6.03e-07!13;UBERON:0000468!6.43e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;8.36e-22;32!UBERON:0002791;1.00e-21;32!UBERON:0003528;3.85e-21;34!UBERON:0002020;3.85e-21;34!UBERON:0001893;1.25e-20;34!UBERON:0000955;6.17e-17;68!UBERON:0002780;2.00e-15;41!UBERON:0001890;2.00e-15;41!UBERON:0000956;4.48e-15;25!UBERON:0000203;4.48e-15;25!UBERON:0000073;2.55e-12;53!UBERON:0002616;2.55e-12;53!UBERON:0001017;9.92e-12;75!UBERON:0002420;1.54e-11;9!UBERON:0000125;1.54e-11;9!UBERON:0007245;1.54e-11;9!UBERON:0002308;1.54e-11;9!UBERON:0010009;1.54e-11;9!UBERON:0010011;1.54e-11;9!UBERON:0000454;1.54e-11;9!UBERON:0001950;8.02e-11;20!UBERON:0002619;7.83e-10;22!UBERON:0005383;1.86e-09;3!UBERON:0005382;1.86e-09;3!UBERON:0009663;9.31e-09;7!UBERON:0001016;3.63e-08;83!UBERON:0001874;1.04e-07;1!UBERON:0003112;1.04e-07;1!UBERON:0011158;1.04e-07;1!UBERON:0003128;1.04e-07;1!UBERON:0001703;1.04e-07;1!UBERON:0002241;1.04e-07;1!UBERON:0002784;1.07e-07;4!UBERON:0000369;2.66e-07;4!UBERON:0002435;2.66e-07;4!UBERON:0000204;2.66e-07;4!UBERON:0002680;6.54e-07;9!UBERON:0001895;6.54e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.32e-29,56;UBERON:0005068,1.32e-29,56;UBERON:0006241,1.32e-29,56;UBERON:0007135,1.32e-29,56;UBERON:0000073,9.32e-28,53;UBERON:0002616,9.32e-28,53;UBERON:0001017,2.06e-27,81;UBERON:0003528,1.36e-24,34;UBERON:0002020,1.36e-24,34;UBERON:0001016,2.44e-24,89;UBERON:0002780,7.52e-24,41;UBERON:0001890,7.52e-24,41;UBERON:0003080,7.52e-24,41;UBERON:0006240,7.52e-24,41;UBERON:0000955,1.31e-23,68;UBERON:0006238,1.31e-23,68;UBERON:0002791,5.80e-22,32;UBERON:0001869,5.80e-22,32;UBERON:0003075,9.58e-22,82;UBERON:0007284,9.58e-22,82;UBERON:0001893,1.36e-20,34;UBERON:0002346,1.41e-20,86;UBERON:0010371,1.43e-18,104;UBERON:0003056,7.03e-18,61;UBERON:0004121,2.72e-15,171;UBERON:0000924,2.72e-15,171;UBERON:0006601,2.72e-15,171;UBERON:0000956,5.25e-15,25;UBERON:0000203,5.25e-15,25;UBERON:0010314,7.95e-14,132;UBERON:0011216,3.67e-13,223;UBERON:0002420,7.02e-12,9;UBERON:0007245,7.02e-12,9;UBERON:0010009,7.02e-12,9;UBERON:0010011,7.02e-12,9;UBERON:0000454,7.02e-12,9;UBERON:0000125,8.08e-12,9;UBERON:0002308,8.08e-12,9;UBERON:0007023,1.52e-11,114;UBERON:0001950,7.36e-11,20;UBERON:0002619,7.24e-10,22;UBERON:0005383,1.26e-09,3;UBERON:0005382,1.26e-09,3;UBERON:0000025,1.76e-09,192;UBERON:0009663,5.73e-09,7;UBERON:0003112,6.10e-08,1;UBERON:0011158,6.10e-08,1;UBERON:0003128,6.10e-08,1;UBERON:0001703,6.10e-08,1;UBERON:0002241,6.10e-08,1;UBERON:0004761,6.10e-08,1;UBERON:0009617,6.10e-08,1;UBERON:0001874,8.51e-08,1;UBERON:0002784,1.19e-07,4;UBERON:0000369,2.00e-07,4;UBERON:0002435,2.00e-07,4;UBERON:0000204,2.00e-07,4;UBERON:0010082,2.00e-07,4;UBERON:0003076,4.84e-07,15;UBERON:0003057,4.84e-07,15;UBERON:0002680,4.90e-07,9;UBERON:0001895,4.90e-07,9;UBERON:0010092,4.90e-07,9;UBERON:0004111,8.38e-07,240 | |||
|phase1_expression=0,0.428201047781966,0.140954404095971,0,0,0,0,0,0.261185628199839,0,2.79120467188971,0.218441372130172,0,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0,0.286235987131057,2.05311637609326,1.00434111675842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0.292311015483596,0,0,0,0,0,0,0,0,0,0.121973706129595,0.265059536642971,0.232387885739037,0.310983165046111,0.504641701751257,0,0,0,0,0,0.721879481669586,0.591534000199219,1.01150814046861,0,0.441175890929576,1.08939722046203,0.71181185733329,0.269662616320329,0.588664395376038,0.769494313892781,0,0,0,1.47008711385542,0,0,0,0,0.368965315629341,0,0,0,0,0.0925884451585296,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0.063497894292169,0,0,0,0.205654985406647,0,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.335032530668698,1.27587750330633,0,0,0,0,0,0,0,0.356857977594324,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0,0,0,0,0,0,0,0.604297247958111,0.40101294060657,0.0920809889358963,0.114814448164607,0,0,0,0,0.784349769176855,1.46139224653261,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0.328014645699706,0,0,0.183138929636687,0.082509499920588,0,0.650060246036521,0,0,0.154048617114644,0.307007349452259,0.137836572484531,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0.540911356951966,0,0,0,0,0.121360521749513,0,0,0.47748896947538,0,0.307160702099232,1.9882952955326,0.140669416410513,0,0,0.211125408127993,0.597743964753209,0,0.503865495708552,0,0,0,0,0,0,0.0986434056369336,0,0,2.90799823828566,0.371072392647405,0,0.260427761085233,0,0,0.1137934482855,0,0.236387681767936,0.344743373241465,0.291604613383254,0,1.77148277162768,0.723578631752448,1.52581736317083,0.774054819518572,1.77328571372128,0.658156191461918,0,0.278847488557207,0.0769502585037971,0,0.23056390438806,0,0.108647371922008,0,0,0,0,0.470940769185074,0,0.225595660617181,0.19606253431774,0.503464760927528,0,0.158936578980379,0,0,0,0,0,0,3.05515072466813,0,0,0,0.067401132980677,0,0.702793337176017,0,0,0,0,0,0,0.063186579628488,0.300646838828985,0,0,0.330991955875499,0.313932918407225,0,0,0,0.347119476670262,0,0,0,0,0.290268993867255,0.438535902517113,0.574808199372465,0.193978032976839,0,1.12990370390266,0,0,0.253243183823515,0,0,0.85381197895741,0.999048047910651,0.288180834308212,0,0.171594997861965,0,0,0,0,0,0,0,1.80126086612937,0.410716136675979,0,0,0,0.558564802544508,0,0,0.399358000997982,0.858452096273142,0,0.268733889946905,0,0,0.0787831823072236,0.0824158583811665,0,0.0984274815147488,0,0,0.953423842781029,0.321506296930038,0.962776056180637,1.66176135211674,0,0.77380195455795,0.485996453264197,0,0.157611414598396,0.0524545881349981,0,0.179287339332845,0,0,0.662091970365432,0,0,0,0,1.19730191562487,0.082092520749339,0,0.113312091520126,0,0,1.68067843270016,0.79339561045614,0,0,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0.886068179966986,3.53876168215693,1.1267183763585,0.573409195690071,0.332787154610557,0.18628920882415,0,0,0,0,0,2.81000943484129,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0.800055529326307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0.553033744606923,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0.215649622793364,0,0.327628914576042,0,0,0.247871528518004,0,0.318004350653419,0,0,0,0,0.192687675289379,2.8339315265117,0.638535436228605,1.23069818544453,0.504143392443436,0.414943514785307,1.77623210195036,0,0,0,0.366857197043358,0,0,0,0.198916222116275,0,0,0,0,0,0.147856086217045,0.337687923091973,3.90539049306924,0.620060389503552,0.126831620387814,0.546974809018219,0,0.496211178389294,0,0,2.67850917939143,0,0,0,0,0,0,0.203909198930495,0.657727735628491,0.472775363535873,0,0.078493092850514,1.57115589916002,0,0.913158720509496,0,0,0.285906176706625,0.158013611732727,0.23248285073625,0,0,0.207216164163037,0.6828739083758,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0.467878926924211,0.397901550322736,0,0,0.109940516745429,0,0.0771741581079447,0.655678681511872,0,0.980593287015622,0,1.17785080268967,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0.157771562193185,0.883889372481891,0,0.5290268405154,0.743990036333503,0,0,0.126166424835079,0,0.380095503034311,0,0,0.0918948995348449,0,0.0757786982182394,0.535928260312357,2.48750831837634,0.413731983447581,0,0.23806443146374,0,0,0.112131862580613,0,0.202117188958219,0.217716747896961,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.428201047781966,0.140954404095971,0,0,0,0,0,0.261185628199839,0,2.79120467188971,0.218441372130172,0,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0,0.286235987131057,2.05311637609326,1.00434111675842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0.292311015483596,0,0,0,0,0,0,0,0,0,0.121973706129595,0.265059536642971,0.232387885739037,0.310983165046111,0.504641701751257,0,0,0,0,0,0.721879481669586,0.591534000199219,1.01150814046861,0,0.441175890929576,1.08939722046203,0.71181185733329,0.269662616320329,0.588664395376038,0.769494313892781,0,0,0,1.47008711385542,0,0,0,0,0.368965315629341,0,0,0,0,0.0925884451585296,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0.063497894292169,0,0,0,0.205654985406647,0,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.335032530668698,1.27587750330633,0,0,0,0,0,0,0,0.356857977594324,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0,0,0,0,0,0,0,0.604297247958111,0.40101294060657,0.0920809889358963,0.114814448164607,0,0,0,0,0.784349769176855,1.46139224653261,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0.328014645699706,0,0,0.183138929636687,0.082509499920588,0,0.650060246036521,0,0,0.154048617114644,0.307007349452259,0.137836572484531,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0.540911356951966,0,0,0,0,0.121360521749513,0,0,0.47748896947538,0,0.307160702099232,1.9882952955326,0.140669416410513,0,0,0.211125408127993,0.597743964753209,0,0.503865495708552,0,0,0,0,0,0,0.0986434056369336,0,0,2.90799823828566,0.371072392647405,0,0.260427761085233,0,0,0.1137934482855,0,0.236387681767936,0.344743373241465,0.291604613383254,0,1.77148277162768,0.723578631752448,1.52581736317083,0.774054819518572,1.77328571372128,0.658156191461918,0,0.278847488557207,0.0769502585037971,0,0.23056390438806,0,0.108647371922008,0,0,0,0,0.470940769185074,0,0.225595660617181,0.19606253431774,0.503464760927528,0,0.158936578980379,0,0,0,0,0,0,3.05515072466813,0,0,0,0.067401132980677,0,0.702793337176017,0,0,0,0,0,0,0.063186579628488,0.300646838828985,0,0,0.330991955875499,0.313932918407225,0,0,0,0.347119476670262,0,0,0,0,0.290268993867255,0.438535902517113,0.574808199372465,0.193978032976839,0,1.12990370390266,0,0,0.253243183823515,0,0,0.85381197895741,0.999048047910651,0.288180834308212,0,0.171594997861965,0,0,0,0,0,0,0,1.80126086612937,0.410716136675979,0,0,0,0.558564802544508,0,0,0.399358000997982,0.858452096273142,0,0.268733889946905,0,0,0.0787831823072236,0.0824158583811665,0,0.0984274815147488,0,0,0.953423842781029,0.321506296930038,0.962776056180637,1.66176135211674,0,0.77380195455795,0.485996453264197,0,0.157611414598396,0.0524545881349981,0,0.179287339332845,0,0,0.662091970365432,0,0,0,0,1.19730191562487,0.082092520749339,0,0.113312091520126,0,0,1.68067843270016,0.79339561045614,0,0,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0.886068179966986,3.53876168215693,1.1267183763585,0.573409195690071,0.332787154610557,0.18628920882415,0,0,0,0,0,2.81000943484129,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0.800055529326307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0.553033744606923,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0.215649622793364,0,0.327628914576042,0,0,0.247871528518004,0,0.318004350653419,0,0,0,0,0.192687675289379,2.8339315265117,0.638535436228605,1.23069818544453,0.504143392443436,0.414943514785307,1.77623210195036,0,0,0,0.366857197043358,0,0,0,0.198916222116275,0,0,0,0,0,0.147856086217045,0.337687923091973,3.90539049306924,0.620060389503552,0.126831620387814,0.546974809018219,0,0.496211178389294,0,0,2.67850917939143,0,0,0,0,0,0,0.203909198930495,0.657727735628491,0.472775363535873,0,0.078493092850514,1.57115589916002,0,0.913158720509496,0,0,0.285906176706625,0.158013611732727,0.23248285073625,0,0,0.207216164163037,0.6828739083758,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0.467878926924211,0.397901550322736,0,0,0.109940516745429,0,0.0771741581079447,0.655678681511872,0,0.980593287015622,0,1.17785080268967,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0.157771562193185,0.883889372481891,0,0.5290268405154,0.743990036333503,0,0,0.126166424835079,0,0.380095503034311,0,0,0.0918948995348449,0,0.0757786982182394,0.535928260312357,2.48750831837634,0.413731983447581,0,0.23806443146374,0,0,0.112131862580613,0,0.202117188958219,0.217716747896961,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p18@CKB | |||
}} | }} |
Latest revision as of 15:53, 18 September 2015
Short description: | p18@CKB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_CKB_5end |
Coexpression cluster: | NA |
Association with transcript: | -75bp_to_ENST00000557287_5end |
EntrezGene: | CKB |
HGNC: | 1991 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 1.78e-09 | 3 |