FFCP PHASE1:Hg19::chr3:147111505..147111529,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7545 | |EntrezGene=7545 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12872 | |HGNC=12872 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-152bp_to_ENST00000488404_5end | |association_with_transcript=-152bp_to_ENST00000488404_5end | ||
|cluster_id=chr3:147111505..147111529,+ | |||
|coexpression_cluster_id=C693 | |||
|description=CAGE_peak_6_at_ZIC1_5end | |description=CAGE_peak_6_at_ZIC1_5end | ||
|id=chr3:147111505..147111529,+ | |id=chr3:147111505..147111529,+ | ||
|ontology_enrichment_celltype=CL:0002620!4.28e-13!23;CL:0000243!2.89e-10!15;CL:0000125!2.89e-10!15;CL:0000030!2.89e-10!15;CL:0000339!2.89e-10!15;CL:0002319!6.75e-09!25;CL:0000095!9.71e-09!17;CL:0000123!9.71e-09!17 | |ontology_enrichment_celltype=CL:0002620!4.28e-13!23;CL:0000243!2.89e-10!15;CL:0000125!2.89e-10!15;CL:0000030!2.89e-10!15;CL:0000339!2.89e-10!15;CL:0002319!6.75e-09!25;CL:0000095!9.71e-09!17;CL:0000123!9.71e-09!17 | ||
|ontology_enrichment_celltype_v019=CL:0002620;3.74e-10;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,2.73e-10,23 | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.60e-14;82!UBERON:0006215;6.63e-09;3!UBERON:0006241;3.21e-08;3!UBERON:0003057;3.21e-08;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;2.40e-11;5!DOID:450;2.40e-11;5!DOID:66;2.40e-11;5!DOID:423;2.40e-11;5!DOID:0080000;2.40e-11;5!DOID:11722;2.40e-11;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.62e-11,5;DOID:450,1.62e-11,5;DOID:66,1.62e-11,5;DOID:423,1.62e-11,5;DOID:0080000,1.62e-11,5;DOID:11722,1.62e-11,5 | |||
|ontology_enrichment_uberon=UBERON:0000073!8.11e-51!94;UBERON:0001016!8.11e-51!94;UBERON:0001017!1.86e-49!82;UBERON:0005743!8.60e-48!86;UBERON:0000955!2.02e-44!69;UBERON:0006238!2.02e-44!69;UBERON:0001049!5.56e-39!57;UBERON:0005068!5.56e-39!57;UBERON:0006241!5.56e-39!57;UBERON:0007135!5.56e-39!57;UBERON:0002616!5.98e-39!59;UBERON:0003075!8.94e-32!86;UBERON:0007284!8.94e-32!86;UBERON:0002346!2.02e-29!90;UBERON:0004121!8.72e-26!169;UBERON:0000033!1.17e-25!123;UBERON:0000924!1.48e-24!173;UBERON:0006601!1.48e-24!173;UBERON:0002780!5.26e-24!41;UBERON:0001890!5.26e-24!41;UBERON:0006240!5.26e-24!41;UBERON:0000153!2.14e-23!129;UBERON:0007811!2.14e-23!129;UBERON:0003080!3.77e-23!42;UBERON:0003056!7.63e-21!61;UBERON:0001893!1.47e-19!34;UBERON:0002020!1.56e-19!34;UBERON:0003528!1.56e-19!34;UBERON:0002791!1.04e-18!33;UBERON:0007023!4.59e-18!115;UBERON:0003076!6.29e-18!15;UBERON:0003057!6.29e-18!15;UBERON:0001869!1.35e-17!32;UBERON:0004732!2.18e-15!13;UBERON:0000475!1.45e-14!365;UBERON:0004733!1.71e-14!12;UBERON:0002028!1.71e-14!12;UBERON:0007277!1.71e-14!12;UBERON:0002308!3.01e-11!9;UBERON:0000125!3.01e-11!9;UBERON:0000956!5.27e-11!25;UBERON:0000203!5.27e-11!25;UBERON:0002680!7.51e-11!9;UBERON:0001895!7.51e-11!9;UBERON:0010092!7.51e-11!9;UBERON:0002619!1.44e-09!22;UBERON:0009663!3.34e-09!7;UBERON:0002420!2.09e-08!9;UBERON:0007245!2.09e-08!9;UBERON:0010009!2.09e-08!9;UBERON:0010011!2.09e-08!9;UBERON:0000454!2.09e-08!9;UBERON:0001950!5.50e-08!20;UBERON:0002298!6.07e-08!8;UBERON:0002097!9.98e-08!40;UBERON:0002037!1.07e-07!6;UBERON:0006215!1.07e-07!6;UBERON:0002199!1.81e-07!45;UBERON:0002416!1.81e-07!45;UBERON:0000119!7.87e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0004732;5.65e-25;13!UBERON:0004733;3.00e-23;12!UBERON:0002028;3.00e-23;12!UBERON:0000073;3.45e-23;53!UBERON:0002616;3.45e-23;53!UBERON:0001016;6.63e-21;83!UBERON:0000125;3.95e-20;9!UBERON:0002308;3.95e-20;9!UBERON:0001017;9.60e-20;75!UBERON:0002780;5.93e-17;41!UBERON:0001890;5.93e-17;41!UBERON:0009663;2.07e-16;7!UBERON:0000955;2.45e-16;68!UBERON:0002680;2.89e-16;9!UBERON:0001895;2.89e-16;9!UBERON:0002298;1.01e-14;6!UBERON:0003528;1.49e-14;34!UBERON:0002020;1.49e-14;34!UBERON:0001893;2.01e-14;34!UBERON:0002791;4.39e-13;32!UBERON:0001869;4.92e-13;32!UBERON:0002420;1.75e-12;9!UBERON:0007245;1.75e-12;9!UBERON:0010009;1.75e-12;9!UBERON:0010011;1.75e-12;9!UBERON:0000454;1.75e-12;9!UBERON:0002037;2.05e-10;6!UBERON:0000369;2.53e-10;4!UBERON:0002435;2.53e-10;4!UBERON:0000204;2.53e-10;4!UBERON:0002784;4.99e-10;4!UBERON:0001896;7.90e-09;3!UBERON:0005290;7.90e-09;3!UBERON:0007023;2.18e-08;114!UBERON:0005383;2.69e-08;3!UBERON:0005382;2.69e-08;3!UBERON:0001894;2.98e-08;7!UBERON:0002240;3.21e-08;3!UBERON:0005174;3.21e-08;3!UBERON:0001137;3.21e-08;3!UBERON:0000988;1.34e-07;3!UBERON:0001870;1.34e-07;3!UBERON:0011216;4.13e-07;132!UBERON:0001872;4.44e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.49e-50,89;UBERON:0001049,6.60e-48,56;UBERON:0005068,6.60e-48,56;UBERON:0006241,6.60e-48,56;UBERON:0007135,6.60e-48,56;UBERON:0001017,6.87e-46,81;UBERON:0000073,4.72e-42,53;UBERON:0002616,4.72e-42,53;UBERON:0000955,1.59e-40,68;UBERON:0006238,1.59e-40,68;UBERON:0003075,5.93e-35,82;UBERON:0007284,5.93e-35,82;UBERON:0002346,8.43e-33,86;UBERON:0010371,4.06e-30,104;UBERON:0003076,4.18e-30,15;UBERON:0003057,4.18e-30,15;UBERON:0004121,4.87e-26,171;UBERON:0000924,4.87e-26,171;UBERON:0006601,4.87e-26,171;UBERON:0004732,3.34e-25,13;UBERON:0007023,1.03e-23,114;UBERON:0004733,1.91e-23,12;UBERON:0002028,1.91e-23,12;UBERON:0007277,1.91e-23,12;UBERON:0002780,3.41e-23,41;UBERON:0001890,3.41e-23,41;UBERON:0003080,3.41e-23,41;UBERON:0006240,3.41e-23,41;UBERON:0010314,2.89e-21,132;UBERON:0000125,2.19e-20,9;UBERON:0002308,2.19e-20,9;UBERON:0003056,5.82e-18,61;UBERON:0001893,5.25e-17,34;UBERON:0003528,5.66e-17,34;UBERON:0002020,5.66e-17,34;UBERON:0002680,1.85e-16,9;UBERON:0001895,1.85e-16,9;UBERON:0010092,1.85e-16,9;UBERON:0009663,2.07e-16,7;UBERON:0011216,9.40e-16,223;UBERON:0002298,6.27e-15,6;UBERON:0002791,4.00e-14,32;UBERON:0001869,4.42e-14,32;UBERON:0002420,1.75e-12,9;UBERON:0007245,1.75e-12,9;UBERON:0010009,1.75e-12,9;UBERON:0010011,1.75e-12,9;UBERON:0000454,1.75e-12,9;UBERON:0002037,2.01e-10,6;UBERON:0006215,2.01e-10,6;UBERON:0000369,3.15e-10,4;UBERON:0002435,3.15e-10,4;UBERON:0000204,3.15e-10,4;UBERON:0010082,3.15e-10,4;UBERON:0002784,5.27e-10,4;UBERON:0001896,8.05e-09,3;UBERON:0005290,8.05e-09,3;UBERON:0010096,8.05e-09,3;UBERON:0002240,2.31e-08,3;UBERON:0005174,2.31e-08,3;UBERON:0001137,2.31e-08,3;UBERON:0005383,2.54e-08,3;UBERON:0005382,2.54e-08,3;UBERON:0000025,2.93e-08,192;UBERON:0001894,3.64e-08,7;UBERON:0006222,3.64e-08,7;UBERON:0002097,4.83e-08,41;UBERON:0001870,7.21e-08,3;UBERON:0000988,8.29e-08,3;UBERON:0001872,5.38e-07,5;UBERON:0002199,8.14e-07,46;UBERON:0002416,8.14e-07,46 | |||
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| ||
|short_description=p6@ZIC1 | |short_description=p6@ZIC1 | ||
}} | }} |
Latest revision as of 18:14, 15 September 2015
Short description: | p6@ZIC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ZIC1_5end |
Coexpression cluster: | C693_cerebellum_medulla_spinal_locus_Hepatocyte_pons_thalamus |
Association with transcript: | -152bp_to_ENST00000488404_5end |
EntrezGene: | ZIC1 |
HGNC: | 12872 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 2.73e-10 | 23 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.62e-11 | 5 |
myotonic disease | 1.62e-11 | 5 |
muscle tissue disease | 1.62e-11 | 5 |
myopathy | 1.62e-11 | 5 |
muscular disease | 1.62e-11 | 5 |
myotonic dystrophy | 1.62e-11 | 5 |