FFCP PHASE1:Hg19::chr4:174320407..174320423,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11341 | |EntrezGene=11341 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17036 | |HGNC=17036 | ||
|TSSclassifier=strong | |||
|UniProt=O75711,Q6FGG5 | |UniProt=O75711,Q6FGG5 | ||
|association_with_transcript=193bp_to_NM_007281,uc003ite.2_5end | |association_with_transcript=193bp_to_NM_007281,uc003ite.2_5end | ||
|cluster_id=chr4:174320407..174320423,- | |||
|description=CAGE_peak_4_at_SCRG1_5end | |description=CAGE_peak_4_at_SCRG1_5end | ||
|id=chr4:174320407..174320423,- | |id=chr4:174320407..174320423,- | ||
|ontology_enrichment_celltype=CL:0000055!7.89e-08!180;CL:0000153!7.91e-07!9;CL:0000447!7.91e-07!9 | |ontology_enrichment_celltype=CL:0000055!7.89e-08!180;CL:0000153!7.91e-07!9;CL:0000447!7.91e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000153;1.14e-09;9!CL:0000447;1.14e-09;9!CL:0000138;4.62e-08;6!CL:0002334;6.10e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,1.15e-09,9;CL:0000447,1.15e-09,9;CL:0000058,4.66e-08,6;CL:0000138,4.66e-08,6;CL:0002334,6.36e-08,12 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.74e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001893;1.04e-27;34!UBERON:0001869;2.50e-27;32!UBERON:0003528;2.67e-27;34!UBERON:0002020;2.67e-27;34!UBERON:0002791;4.64e-27;32!UBERON:0000956;1.44e-24;25!UBERON:0000203;1.44e-24;25!UBERON:0002780;8.66e-23;41!UBERON:0001890;8.66e-23;41!UBERON:0000073;1.03e-22;53!UBERON:0002616;1.03e-22;53!UBERON:0002619;1.72e-21;22!UBERON:0001950;5.20e-19;20!UBERON:0001017;2.58e-15;75!UBERON:0000955;8.44e-15;68!UBERON:0001016;2.84e-13;83!UBERON:0004457;4.63e-12;9!UBERON:0000042;4.63e-12;9!UBERON:0003688;9.49e-11;6!UBERON:0002358;9.49e-11;6!UBERON:0003684;9.49e-11;6!UBERON:0001178;9.49e-11;6!UBERON:0000200;9.69e-10;6!UBERON:0004732;1.21e-09;13!UBERON:0000125;3.44e-09;9!UBERON:0002308;3.44e-09;9!UBERON:0002298;9.20e-09;6!UBERON:0007023;1.49e-08;114!UBERON:0004733;1.70e-08;12!UBERON:0002028;1.70e-08;12!UBERON:0002021;6.11e-07;5!UBERON:0002420;6.76e-07;9!UBERON:0007245;6.76e-07;9!UBERON:0010009;6.76e-07;9!UBERON:0010011;6.76e-07;9!UBERON:0000454;6.76e-07;9!UBERON:0009663;8.58e-07;7 | |||
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|phase1_expression=6.54042165374004,1.49870366723688,19.8745709775319,7.00513088471913,24.1358990990735,29.6595098194125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.19418305034661,5.72471974262113,1.50561867580173,1.88313959392204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55725123687061,46.6256506576091,29.5789367275175,41.8606439796781,34.1972957231973,56.4496449551058,0,0,0,2.48860243445654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.3516256330706,1.77282716330412,0.397227542439656,6.88407889797153,0.709336764396714,0,3.20246987189115,0.98667019366864,0,0.538842688278752,0,0.151357427644931,0,0,0,0,0.298897361103602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919463387397059,0.600952235626387,0.340296549480063,0.179389635688862,0.640672166455702,0.423863802319124,0,0,0,2.04728541964749,0.506328996723799,1.07180705677318,0,0.460249493211497,0.484938170456436,0.710019185033229,0.503760491138201,0.508681776931463,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0.142977993658148,1.08524321078289,0,0,0.355391948742546,0,0,0,0,0,0,0,40.9758502890606,11.4861935834114,0,1.73737568001095,0,0,0,0,0,0,3.55732473911449,2.60279707715243,2.31986643833309,2.68026024534958,3.18969375826582,0,0,0,0,0.500170521059677,1.35632511849868,0.207970861530807,0.356857977594324,0,1.28855556491985,17.15392768448,0,6.2083842775503,0.664225598535437,1.65932251687533,0,0,0,0,0,0,0,0,0,16.6232231238581,9.05425642399569,7.29716245525991,22.9369077167705,6.14048698880044,12.5466058492014,7.42090332224955,0,1.42049380250502,0.246381468041427,0,0,0,0,0.0920809889358963,1.03333003348146,0.182091168006717,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,4.82051789532479,10.4404375755492,0,0,0.137836572484531,0.537101224341368,0,0.0852266274161009,21.2786565195702,0,0,0,0,2.32422774648643,8.81474571125792,0,0,0,0,0,1.5743737541619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,1.05650146756755,3.13949796238367,2.2624869112594,1.13008116620243,0,0.66343897524122,0,0,0,0.405820753925408,1.239293992399,0.563391205064483,0,1.47373561519682,0,0.709522128141196,31.455037659352,8.56166721695745,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,3.65740482667333,0,0,0,16.5375830248388,0,0,0,0,0.622079175323615,0,0,0,2.07151151837561,0,0,5.81599647657131,8.62743312905217,1.99613798001194,0,0,0,0,0,0,0,0,0.173624994933292,0.885741385813839,3.13550740426061,0,1.43753037910592,6.50204761697804,5.70402032600329,0,0,0.538651809526579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,1.41532103205343,0.611030144933625,0,0,0,4.58327704268604,0,3.98249557733077,0,0,0,3.55125962564451,0,1.22429104652196,3.1593289814244,0,0,0,0,0,0,0,0.416024019039416,0,0,0,2.79562669187248,0.171986032471617,0,0,0,0.581934098930517,0,0.451961481561065,0.137041924646751,0,5.88790402389672,0,0,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,1.80126086612937,2.0535806833799,0,0,0,1.95497680890578,4.81236890424536,0.717873024576814,0.199679000498991,0,0,0.470284307407084,1.80149941771202,0,0,0,0,0,0,6.36183751847443,3.81369537112412,0,0,0,0,0,4.73846541932592,0,0.551639951094387,0.104909176269996,0,0,0,0.714695326373367,0,0,0,0,0.326587360109409,0,0,0,0,0,0,5.30060121082357,3.83474545053801,0,0,0.106787412567695,0.314408610199332,0,0,0,0,0,0,0,0,0,0,9.74674997963685,6.34536577490208,4.256491644021,4.0138643698305,1.66393577305278,6.14754389119696,0,0,0.151649117541648,0,0,0,0,0.597019211547496,3.27198633786114,2.21922344601045,1.32582103692562,4.52822223154635,4.44905610798268,8.00940239389232,4.68815863666041,0.310874401165561,0,0,0,0.155262956876259,0.829412415681711,0,0,0.300515217994437,0,0,0,0.214821114084977,0,0,0,12.7056410917633,9.09223619667982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31820246764154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786329709279482,0.218419276384028,0,0,0,0,2.86203915588077,0,0,0.705351887381368,0,4.88142110733092,1.41696576325585,2.55414174491442,4.71767637753736,1.00828678488687,5.11763668235212,3.06803726700517,4.28308260777463,0,0,0,0,0.762764190934334,0,0,0.526472298444801,0,0,0,0,0,6.61868329260268,3.90539049306924,3.10030194751776,5.77083872764552,0,0,3.96968942711435,0,0,0,0.336283722218824,0,0,0.0887023701626388,0,0,3.53442611479525,6.64305012984776,0,0,2.27629969266491,3.77077415798405,0,0,0,0,0.571812353413251,0,0,0,0,0,0,0,0,0,0,1.69354820076372,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.385870790539723,0.437119121007915,0,0.490296643507811,0,8.04864715171276,4.75274240523338,4.226557275834,3.22861517906852,0,0.0644578879735772,0,0,0,0,0,0,2.43677291357467,0,4.28346388202763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| ||
|short_description=p4@SCRG1 | |short_description=p4@SCRG1 | ||
}} | }} |
Latest revision as of 19:21, 16 September 2015
Short description: | p4@SCRG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SCRG1_5end |
Coexpression cluster: | NA |
Association with transcript: | 193bp_to_NM_007281, uc003ite.2_5end |
EntrezGene: | SCRG1 |
HGNC: | 17036 |
UniProt: | O75711Q6FGG5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 1.15e-09 | 9 |
carbohydrate secreting cell | 1.15e-09 | 9 |
chondroblast | 4.66e-08 | 6 |
chondrocyte | 4.66e-08 | 6 |
preadipocyte | 6.36e-08 | 12 |