FFCP PHASE1:Hg19::chr4:83932086..83932127,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=132660 | |EntrezGene=132660 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25397 | |HGNC=25397 | ||
|TSSclassifier=strong | |||
|UniProt=Q6MZP7,Q7Z3G2 | |UniProt=Q6MZP7,Q7Z3G2 | ||
|association_with_transcript=-104bp_to_ENST00000340417,NM_001115008,NM_194282,uc003hnx.3,uc003hny.3,uc003hnz.3,uc010ijt.2,uc010iju.2_5end | |association_with_transcript=-104bp_to_ENST00000340417,NM_001115008,NM_194282,uc003hnx.3,uc003hny.3,uc003hnz.3,uc010ijt.2,uc010iju.2_5end | ||
|cluster_id=chr4:83932086..83932127,- | |||
|description=CAGE_peak_4_at_LIN54_5end | |description=CAGE_peak_4_at_LIN54_5end | ||
|id=chr4:83932086..83932127,- | |id=chr4:83932086..83932127,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.28e-13;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.22e-39!115;UBERON:0000073!5.46e-27!94;UBERON:0001016!5.46e-27!94;UBERON:0001049!3.63e-26!57;UBERON:0005068!3.63e-26!57;UBERON:0006241!3.63e-26!57;UBERON:0007135!3.63e-26!57;UBERON:0005743!1.08e-25!86;UBERON:0001017!1.94e-25!82;UBERON:0002616!9.45e-23!59;UBERON:0000955!2.03e-22!69;UBERON:0006238!2.03e-22!69;UBERON:0003075!5.58e-22!86;UBERON:0007284!5.58e-22!86;UBERON:0002780!6.17e-22!41;UBERON:0001890!6.17e-22!41;UBERON:0006240!6.17e-22!41;UBERON:0002346!1.05e-21!90;UBERON:0003080!8.94e-21!42;UBERON:0001893!4.90e-18!34;UBERON:0002020!1.06e-17!34;UBERON:0003528!1.06e-17!34;UBERON:0002791!2.37e-17!33;UBERON:0001869!8.23e-17!32;UBERON:0003056!3.32e-16!61;UBERON:0002619!3.25e-15!22;UBERON:0001950!3.55e-14!20;UBERON:0000924!4.26e-13!173;UBERON:0006601!4.26e-13!173;UBERON:0004121!5.39e-13!169;UBERON:0000956!1.64e-12!25;UBERON:0000203!1.64e-12!25;UBERON:0000153!4.84e-12!129;UBERON:0007811!4.84e-12!129;UBERON:0000033!2.07e-11!123;UBERON:0002420!3.81e-07!9;UBERON:0007245!3.81e-07!9;UBERON:0010009!3.81e-07!9;UBERON:0010011!3.81e-07!9;UBERON:0000454!3.81e-07!9;UBERON:0002308!9.50e-07!9;UBERON:0000125!9.50e-07!9;UBERON:0000025!9.63e-07!194 | |ontology_enrichment_uberon=UBERON:0007023!5.22e-39!115;UBERON:0000073!5.46e-27!94;UBERON:0001016!5.46e-27!94;UBERON:0001049!3.63e-26!57;UBERON:0005068!3.63e-26!57;UBERON:0006241!3.63e-26!57;UBERON:0007135!3.63e-26!57;UBERON:0005743!1.08e-25!86;UBERON:0001017!1.94e-25!82;UBERON:0002616!9.45e-23!59;UBERON:0000955!2.03e-22!69;UBERON:0006238!2.03e-22!69;UBERON:0003075!5.58e-22!86;UBERON:0007284!5.58e-22!86;UBERON:0002780!6.17e-22!41;UBERON:0001890!6.17e-22!41;UBERON:0006240!6.17e-22!41;UBERON:0002346!1.05e-21!90;UBERON:0003080!8.94e-21!42;UBERON:0001893!4.90e-18!34;UBERON:0002020!1.06e-17!34;UBERON:0003528!1.06e-17!34;UBERON:0002791!2.37e-17!33;UBERON:0001869!8.23e-17!32;UBERON:0003056!3.32e-16!61;UBERON:0002619!3.25e-15!22;UBERON:0001950!3.55e-14!20;UBERON:0000924!4.26e-13!173;UBERON:0006601!4.26e-13!173;UBERON:0004121!5.39e-13!169;UBERON:0000956!1.64e-12!25;UBERON:0000203!1.64e-12!25;UBERON:0000153!4.84e-12!129;UBERON:0007811!4.84e-12!129;UBERON:0000033!2.07e-11!123;UBERON:0002420!3.81e-07!9;UBERON:0007245!3.81e-07!9;UBERON:0010009!3.81e-07!9;UBERON:0010011!3.81e-07!9;UBERON:0000454!3.81e-07!9;UBERON:0002308!9.50e-07!9;UBERON:0000125!9.50e-07!9;UBERON:0000025!9.63e-07!194 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;9.71e-30;41!UBERON:0001890;9.71e-30;41!UBERON:0002619;1.22e-28;22!UBERON:0001893;6.17e-28;34!UBERON:0001869;1.00e-27;32!UBERON:0002791;1.23e-27;32!UBERON:0003528;1.43e-27;34!UBERON:0002020;1.43e-27;34!UBERON:0000073;1.57e-27;53!UBERON:0002616;1.57e-27;53!UBERON:0001950;1.07e-26;20!UBERON:0000956;2.36e-24;25!UBERON:0000203;2.36e-24;25!UBERON:0000955;4.27e-19;68!UBERON:0001017;9.66e-19;75!UBERON:0001016;1.22e-17;83!UBERON:0007023;3.30e-15;114!UBERON:0002420;1.09e-10;9!UBERON:0007245;1.09e-10;9!UBERON:0010009;1.09e-10;9!UBERON:0010011;1.09e-10;9!UBERON:0000454;1.09e-10;9!UBERON:0000125;3.99e-10;9!UBERON:0002308;3.99e-10;9!UBERON:0001871;1.19e-09;6!UBERON:0001894;3.38e-09;7!UBERON:0000200;4.62e-09;6!UBERON:0004732;1.58e-08;13!UBERON:0011216;2.77e-08;132!UBERON:0009663;3.39e-08;7!UBERON:0002021;8.14e-08;5!UBERON:0002298;8.72e-08;6!UBERON:0004733;9.27e-08;12!UBERON:0002028;9.27e-08;12!UBERON:0001872;1.37e-07;5!UBERON:0000349;1.81e-07;5 | |||
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| ||
|short_description=p4@LIN54 | |short_description=p4@LIN54 | ||
}} | }} |
Latest revision as of 01:35, 19 September 2015
Short description: | p4@LIN54 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LIN54_5end |
Coexpression cluster: | NA |
Association with transcript: | -104bp_to_ENST00000340417, NM_001115008, NM_194282, uc003hnx.3, uc003hny.3, uc003hnz.3, uc010ijt.2, uc010iju.2_5end |
EntrezGene: | LIN54 |
HGNC: | 25397 |
UniProt: | Q6MZP7Q7Z3G2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data