FFCP PHASE1:Hg19::chr5:143550407..143550439,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57528 | |EntrezGene=57528 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29244 | |HGNC=29244 | ||
|TSSclassifier=strong | |||
|UniProt=A8K8W2,Q68DU8 | |UniProt=A8K8W2,Q68DU8 | ||
|association_with_transcript=0bp_to_NM_020768,uc003lnm.1_5end | |association_with_transcript=0bp_to_NM_020768,uc003lnm.1_5end | ||
|cluster_id=chr5:143550407..143550439,+ | |||
|description=CAGE_peak_5_at_KCTD16_5end | |description=CAGE_peak_5_at_KCTD16_5end | ||
|id=chr5:143550407..143550439,+ | |id=chr5:143550407..143550439,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000895;2.12e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000810,1.18e-08,1;CL:0000895,1.18e-08,1;CL:0002436,1.18e-08,1;CL:0002427,1.18e-08,1;CL:0002428,1.18e-08,1;CL:0002429,1.18e-08,1;CL:0002433,1.18e-08,1;CL:0002431,1.18e-08,1;CL:0002432,1.18e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.38e-13;82!CL:0002427;2.12e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.78e-29!57;UBERON:0005068!1.78e-29!57;UBERON:0006241!1.78e-29!57;UBERON:0007135!1.78e-29!57;UBERON:0002616!9.55e-27!59;UBERON:0003075!9.60e-26!86;UBERON:0007284!9.60e-26!86;UBERON:0002346!9.54e-25!90;UBERON:0000955!1.16e-24!69;UBERON:0006238!1.16e-24!69;UBERON:0002780!8.76e-24!41;UBERON:0001890!8.76e-24!41;UBERON:0006240!8.76e-24!41;UBERON:0005743!1.75e-23!86;UBERON:0003080!9.30e-23!42;UBERON:0001017!1.05e-22!82;UBERON:0000073!1.30e-21!94;UBERON:0001016!1.30e-21!94;UBERON:0003056!2.48e-21!61;UBERON:0001893!1.49e-18!34;UBERON:0002020!1.97e-18!34;UBERON:0003528!1.97e-18!34;UBERON:0000153!2.22e-18!129;UBERON:0007811!2.22e-18!129;UBERON:0002791!8.90e-18!33;UBERON:0001869!2.76e-17!32;UBERON:0000033!1.17e-16!123;UBERON:0004121!1.70e-15!169;UBERON:0000924!3.20e-15!173;UBERON:0006601!3.20e-15!173;UBERON:0002619!3.28e-15!22;UBERON:0001950!5.57e-14!20;UBERON:0000956!5.41e-13!25;UBERON:0000203!5.41e-13!25;UBERON:0007023!1.59e-10!115;UBERON:0000475!5.34e-08!365;UBERON:0003076!7.31e-08!15;UBERON:0003057!7.31e-08!15;UBERON:0000483!9.19e-08!309;UBERON:0000119!9.98e-08!312;UBERON:0002420!3.18e-07!9;UBERON:0007245!3.18e-07!9;UBERON:0010009!3.18e-07!9;UBERON:0010011!3.18e-07!9;UBERON:0000454!3.18e-07!9;UBERON:0002308!5.32e-07!9;UBERON:0000125!5.32e-07!9;UBERON:0001894!7.91e-07!7;UBERON:0006222!7.91e-07!7 | |ontology_enrichment_uberon=UBERON:0001049!1.78e-29!57;UBERON:0005068!1.78e-29!57;UBERON:0006241!1.78e-29!57;UBERON:0007135!1.78e-29!57;UBERON:0002616!9.55e-27!59;UBERON:0003075!9.60e-26!86;UBERON:0007284!9.60e-26!86;UBERON:0002346!9.54e-25!90;UBERON:0000955!1.16e-24!69;UBERON:0006238!1.16e-24!69;UBERON:0002780!8.76e-24!41;UBERON:0001890!8.76e-24!41;UBERON:0006240!8.76e-24!41;UBERON:0005743!1.75e-23!86;UBERON:0003080!9.30e-23!42;UBERON:0001017!1.05e-22!82;UBERON:0000073!1.30e-21!94;UBERON:0001016!1.30e-21!94;UBERON:0003056!2.48e-21!61;UBERON:0001893!1.49e-18!34;UBERON:0002020!1.97e-18!34;UBERON:0003528!1.97e-18!34;UBERON:0000153!2.22e-18!129;UBERON:0007811!2.22e-18!129;UBERON:0002791!8.90e-18!33;UBERON:0001869!2.76e-17!32;UBERON:0000033!1.17e-16!123;UBERON:0004121!1.70e-15!169;UBERON:0000924!3.20e-15!173;UBERON:0006601!3.20e-15!173;UBERON:0002619!3.28e-15!22;UBERON:0001950!5.57e-14!20;UBERON:0000956!5.41e-13!25;UBERON:0000203!5.41e-13!25;UBERON:0007023!1.59e-10!115;UBERON:0000475!5.34e-08!365;UBERON:0003076!7.31e-08!15;UBERON:0003057!7.31e-08!15;UBERON:0000483!9.19e-08!309;UBERON:0000119!9.98e-08!312;UBERON:0002420!3.18e-07!9;UBERON:0007245!3.18e-07!9;UBERON:0010009!3.18e-07!9;UBERON:0010011!3.18e-07!9;UBERON:0000454!3.18e-07!9;UBERON:0002308!5.32e-07!9;UBERON:0000125!5.32e-07!9;UBERON:0001894!7.91e-07!7;UBERON:0006222!7.91e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0000073;5.98e-26;53!UBERON:0002616;5.98e-26;53!UBERON:0002619;1.46e-23;22!UBERON:0002780;3.60e-23;41!UBERON:0001890;3.60e-23;41!UBERON:0000956;1.09e-20;25!UBERON:0000203;1.09e-20;25!UBERON:0001950;1.56e-20;20!UBERON:0003528;1.74e-19;34!UBERON:0002020;1.74e-19;34!UBERON:0001893;3.80e-19;34!UBERON:0000200;5.02e-19;6!UBERON:0002298;5.02e-19;6!UBERON:0001869;6.09e-18;32!UBERON:0002791;6.80e-18;32!UBERON:0003296;1.37e-17;4!UBERON:0010133;1.37e-17;4!UBERON:0001894;2.07e-17;7!UBERON:0000007;3.29e-16;2!UBERON:0000955;4.87e-16;68!UBERON:0001016;1.49e-13;83!UBERON:0001017;2.63e-13;75!UBERON:0000988;2.26e-10;3!UBERON:0001896;2.26e-10;3!UBERON:0001870;2.26e-10;3!UBERON:0005290;2.26e-10;3!UBERON:0004733;1.31e-09;12!UBERON:0002028;1.31e-09;12!UBERON:0004732;7.00e-09;13!UBERON:0002581;2.12e-08;1!UBERON:0002022;2.12e-08;1!UBERON:0002038;2.12e-08;1!UBERON:0009661;2.12e-08;1!UBERON:0002950;2.12e-08;1!UBERON:0007190;2.12e-08;1!UBERON:0001891;2.12e-08;1!UBERON:0002784;2.21e-08;4!UBERON:0007023;5.98e-08;114 | |||
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| ||
|short_description=p5@KCTD16 | |short_description=p5@KCTD16 | ||
}} | }} |
Latest revision as of 18:44, 15 September 2015
Short description: | p5@KCTD16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_KCTD16_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_020768, uc003lnm.1_5end |
EntrezGene: | KCTD16 |
HGNC: | 29244 |
UniProt: | A8K8W2Q68DU8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta thymocyte | 1.18e-08 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 1.18e-08 | 1 |
mature CD4 single-positive thymocyte | 1.18e-08 | 1 |
resting double-positive thymocyte | 1.18e-08 | 1 |
double-positive blast | 1.18e-08 | 1 |
CD69-positive double-positive thymocyte | 1.18e-08 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 1.18e-08 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 1.18e-08 | 1 |
CD24-positive, CD4 single-positive thymocyte | 1.18e-08 | 1 |