FFCP PHASE1:Hg19::chr7:150066171..150066232,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29803 | |EntrezGene=29803 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17922 | |HGNC=17922 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-236bp_to_ENST00000518462_5end | |association_with_transcript=-236bp_to_ENST00000518462_5end | ||
|cluster_id=chr7:150066171..150066232,+ | |||
|description=CAGE_peak_2_at_REPIN1_5end | |description=CAGE_peak_2_at_REPIN1_5end | ||
|id=chr7:150066171..150066232,+ | |id=chr7:150066171..150066232,+ | ||
|ontology_enrichment_celltype=CL:0000838!7.96e-11!52;CL:0000542!2.32e-10!53;CL:0000051!2.32e-10!53;CL:0000791!3.15e-07!18;CL:0000789!3.15e-07!18;CL:0002420!3.15e-07!18;CL:0002419!3.15e-07!18;CL:0000790!3.15e-07!18 | |ontology_enrichment_celltype=CL:0000838!7.96e-11!52;CL:0000542!2.32e-10!53;CL:0000051!2.32e-10!53;CL:0000791!3.15e-07!18;CL:0000789!3.15e-07!18;CL:0002420!3.15e-07!18;CL:0002419!3.15e-07!18;CL:0000790!3.15e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.65e-07;18!CL:0000789;1.65e-07;18!CL:0002419;1.65e-07;18!CL:0000542;9.85e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.08e-10,52;CL:0000542,2.98e-10,53;CL:0000051,2.98e-10,53;CL:0000791,2.72e-07,18;CL:0000789,2.72e-07,18;CL:0002420,2.72e-07,18;CL:0002419,2.72e-07,18;CL:0000790,2.72e-07,18 | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.63e-10;82!CL:0000790;1.65e-07;18!CL:0000051;9.85e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.65e-31!115;UBERON:0001049!7.25e-20!57;UBERON:0005068!7.25e-20!57;UBERON:0006241!7.25e-20!57;UBERON:0007135!7.25e-20!57;UBERON:0002780!7.89e-19!41;UBERON:0001890!7.89e-19!41;UBERON:0006240!7.89e-19!41;UBERON:0003080!1.16e-17!42;UBERON:0000955!2.97e-16!69;UBERON:0006238!2.97e-16!69;UBERON:0002020!5.18e-16!34;UBERON:0003528!5.18e-16!34;UBERON:0001893!1.20e-15!34;UBERON:0002791!4.02e-15!33;UBERON:0000073!4.72e-15!94;UBERON:0001016!4.72e-15!94;UBERON:0001869!5.42e-15!32;UBERON:0002616!5.49e-15!59;UBERON:0005743!8.31e-14!86;UBERON:0003075!9.25e-14!86;UBERON:0007284!9.25e-14!86;UBERON:0002346!1.17e-13!90;UBERON:0001017!1.32e-13!82;UBERON:0002619!2.79e-12!22;UBERON:0001950!2.49e-11!20;UBERON:0000956!4.66e-11!25;UBERON:0000203!4.66e-11!25;UBERON:0003056!4.98e-11!61;UBERON:0000153!3.78e-08!129;UBERON:0007811!3.78e-08!129;UBERON:0000033!9.67e-07!123 | |ontology_enrichment_uberon=UBERON:0007023!1.65e-31!115;UBERON:0001049!7.25e-20!57;UBERON:0005068!7.25e-20!57;UBERON:0006241!7.25e-20!57;UBERON:0007135!7.25e-20!57;UBERON:0002780!7.89e-19!41;UBERON:0001890!7.89e-19!41;UBERON:0006240!7.89e-19!41;UBERON:0003080!1.16e-17!42;UBERON:0000955!2.97e-16!69;UBERON:0006238!2.97e-16!69;UBERON:0002020!5.18e-16!34;UBERON:0003528!5.18e-16!34;UBERON:0001893!1.20e-15!34;UBERON:0002791!4.02e-15!33;UBERON:0000073!4.72e-15!94;UBERON:0001016!4.72e-15!94;UBERON:0001869!5.42e-15!32;UBERON:0002616!5.49e-15!59;UBERON:0005743!8.31e-14!86;UBERON:0003075!9.25e-14!86;UBERON:0007284!9.25e-14!86;UBERON:0002346!1.17e-13!90;UBERON:0001017!1.32e-13!82;UBERON:0002619!2.79e-12!22;UBERON:0001950!2.49e-11!20;UBERON:0000956!4.66e-11!25;UBERON:0000203!4.66e-11!25;UBERON:0003056!4.98e-11!61;UBERON:0000153!3.78e-08!129;UBERON:0007811!3.78e-08!129;UBERON:0000033!9.67e-07!123 | ||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.12e-17;34!UBERON:0002020;1.12e-17;34!UBERON:0002791;2.02e-17;32!UBERON:0001869;2.14e-17;32!UBERON:0002780;2.49e-17;41!UBERON:0001890;2.49e-17;41!UBERON:0001893;2.97e-17;34!UBERON:0002619;6.03e-16;22!UBERON:0000073;1.34e-15;53!UBERON:0002616;1.34e-15;53!UBERON:0001950;1.28e-14;20!UBERON:0000956;5.58e-14;25!UBERON:0000203;5.58e-14;25!UBERON:0000955;3.46e-11;68!UBERON:0001017;1.26e-09;75!UBERON:0001016;3.79e-09;83!UBERON:0007023;6.03e-09;114!UBERON:0000125;1.89e-08;9!UBERON:0002308;1.89e-08;9!UBERON:0002420;1.08e-07;9!UBERON:0007245;1.08e-07;9!UBERON:0010009;1.08e-07;9!UBERON:0010011;1.08e-07;9!UBERON:0000454;1.08e-07;9!UBERON:0009663;5.07e-07;7 | |||
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| ||
|short_description=p2@REPIN1 | |short_description=p2@REPIN1 | ||
}} | }} |
Latest revision as of 02:57, 17 September 2015
Short description: | p2@REPIN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_REPIN1_5end |
Coexpression cluster: | NA |
Association with transcript: | -236bp_to_ENST00000518462_5end |
EntrezGene: | REPIN1 |
HGNC: | 17922 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.08e-10 | 52 |
lymphocyte | 2.98e-10 | 53 |
common lymphoid progenitor | 2.98e-10 | 53 |
mature alpha-beta T cell | 2.72e-07 | 18 |
alpha-beta T cell | 2.72e-07 | 18 |
immature T cell | 2.72e-07 | 18 |
mature T cell | 2.72e-07 | 18 |
immature alpha-beta T cell | 2.72e-07 | 18 |