FFCP PHASE1:Hg19::chr16:23847339..23847350,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:23847339..23847350,+
|short_description=p4@PRKCB
|description=CAGE_peak_4_at_PRKCB_5end
|association_with_transcript=0bp_to_ENST00000303531_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5579 | |EntrezGene=5579 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9395 | |HGNC=9395 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000303531_5end | |||
|cluster_id=chr16:23847339..23847350,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_4_at_PRKCB_5end | |||
|id=chr16:23847339..23847350,+ | |||
|ontology_enrichment_celltype=CL:0000037!3.56e-42!172;CL:0000566!3.56e-42!172;CL:0002032!8.61e-40!165;CL:0000837!8.61e-40!165;CL:0000988!2.66e-39!182;CL:0000738!3.98e-36!140;CL:0002031!4.49e-30!124;CL:0002087!3.58e-29!119;CL:0000763!2.98e-27!112;CL:0000049!2.98e-27!112;CL:0002057!2.73e-23!42;CL:0000766!4.19e-21!76;CL:0000860!8.80e-21!45;CL:0000557!2.22e-20!71;CL:0002009!5.21e-18!65;CL:0000839!5.28e-18!70;CL:0002194!1.35e-16!63;CL:0000576!1.35e-16!63;CL:0000040!1.35e-16!63;CL:0000559!1.35e-16!63;CL:0000542!3.55e-11!53;CL:0000051!3.55e-11!53;CL:0000838!1.20e-10!52;CL:0000945!3.61e-10!24;CL:0000826!3.61e-10!24;CL:0002393!2.42e-08!9;CL:0002397!2.42e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000236;6.63e-08;13!CL:0000784;5.72e-07;3!CL:0000775;5.72e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,7.38e-10,136;CL:0002393,1.04e-09,9;CL:0002397,1.04e-09,9;CL:0000037,2.50e-09,168;CL:0002032,9.60e-09,161;CL:0000837,9.60e-09,161;CL:0000988,2.42e-08,177;CL:0000766,3.92e-08,72;CL:0000763,5.25e-08,108;CL:0000049,5.25e-08,108;CL:0000557,2.41e-07,67;CL:0000236,3.21e-07,14;CL:0000860,3.72e-07,42;CL:0002057,3.72e-07,42;CL:0000784,5.19e-07,3;CL:0000775,6.10e-07,3;CL:0002009,9.84e-07,61 | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.32e-09;82 | |||
|ontology_enrichment_disease=DOID:2531!4.93e-07!51;DOID:0060083!4.93e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;3.56e-44;32!UBERON:0001893;9.38e-43;34!UBERON:0002619;5.09e-42;22!UBERON:0002791;3.39e-41;32!UBERON:0003528;1.62e-39;34!UBERON:0002020;1.62e-39;34!UBERON:0001950;3.58e-38;20!UBERON:0000956;2.56e-36;25!UBERON:0000203;2.56e-36;25!UBERON:0002780;1.81e-34;41!UBERON:0001890;1.81e-34;41!UBERON:0000073;1.74e-26;53!UBERON:0002616;1.74e-26;53!UBERON:0000955;1.54e-19;68!UBERON:0001017;3.56e-17;75!UBERON:0002420;2.24e-14;9!UBERON:0007245;2.24e-14;9!UBERON:0010009;2.24e-14;9!UBERON:0010011;2.24e-14;9!UBERON:0000454;2.24e-14;9!UBERON:0000200;9.01e-14;6!UBERON:0001016;1.93e-13;83!UBERON:0002021;2.55e-11;5!UBERON:0001872;2.92e-11;5!UBERON:0000349;4.46e-11;5!UBERON:0001871;6.88e-11;6!UBERON:0009663;7.12e-11;7!UBERON:0000125;9.26e-11;9!UBERON:0002308;9.26e-11;9!UBERON:0000369;1.46e-09;4!UBERON:0002435;1.46e-09;4!UBERON:0000204;1.46e-09;4!UBERON:0007023;5.86e-09;114!UBERON:0001870;9.07e-08;3!UBERON:0005383;1.76e-07;3!UBERON:0005382;1.76e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,7.87e-50,32;UBERON:0001893,1.69e-49,34;UBERON:0002780,2.44e-48,41;UBERON:0001890,2.44e-48,41;UBERON:0003080,2.44e-48,41;UBERON:0006240,2.44e-48,41;UBERON:0000073,3.07e-47,53;UBERON:0002616,3.07e-47,53;UBERON:0002791,5.28e-46,32;UBERON:0003528,1.08e-45,34;UBERON:0002020,1.08e-45,34;UBERON:0001049,4.24e-44,56;UBERON:0005068,4.24e-44,56;UBERON:0006241,4.24e-44,56;UBERON:0007135,4.24e-44,56;UBERON:0002619,3.61e-42,22;UBERON:0000955,2.35e-40,68;UBERON:0006238,2.35e-40,68;UBERON:0001950,2.54e-38,20;UBERON:0000956,1.89e-36,25;UBERON:0000203,1.89e-36,25;UBERON:0001017,5.46e-34,81;UBERON:0001016,9.31e-33,89;UBERON:0003056,2.71e-31,61;UBERON:0002346,2.81e-31,86;UBERON:0003075,3.40e-28,82;UBERON:0007284,3.40e-28,82;UBERON:0007023,1.03e-27,114;UBERON:0010371,8.53e-20,104;UBERON:0002420,2.11e-14,9;UBERON:0007245,2.11e-14,9;UBERON:0010009,2.11e-14,9;UBERON:0010011,2.11e-14,9;UBERON:0000454,2.11e-14,9;UBERON:0010314,2.78e-14,132;UBERON:0000200,8.82e-14,6;UBERON:0004121,1.17e-13,171;UBERON:0000924,1.17e-13,171;UBERON:0006601,1.17e-13,171;UBERON:0002021,2.11e-11,5;UBERON:0001872,2.89e-11,5;UBERON:0000349,4.36e-11,5;UBERON:0001871,5.99e-11,6;UBERON:0009663,6.87e-11,7;UBERON:0000125,1.17e-10,9;UBERON:0002308,1.17e-10,9;UBERON:0011216,5.80e-10,223;UBERON:0000369,1.53e-09,4;UBERON:0002435,1.53e-09,4;UBERON:0000204,1.53e-09,4;UBERON:0010082,1.53e-09,4;UBERON:0002390,2.21e-09,98;UBERON:0003061,2.21e-09,98;UBERON:0002193,1.36e-08,108;UBERON:0001870,9.12e-08,3;UBERON:0005383,1.84e-07,3;UBERON:0005382,1.84e-07,3;UBERON:0002405,5.19e-07,93 | |||
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| ||
|short_description=p4@PRKCB | |||
}} | }} |
Latest revision as of 06:43, 25 September 2015
Short description: | p4@PRKCB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PRKCB_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000303531_5end |
EntrezGene: | PRKCB |
HGNC: | 9395 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 7.38e-10 | 136 |
intermediate monocyte | 1.04e-09 | 9 |
CD14-positive, CD16-positive monocyte | 1.04e-09 | 9 |
hematopoietic stem cell | 2.50e-09 | 168 |
hematopoietic oligopotent progenitor cell | 9.60e-09 | 161 |
hematopoietic multipotent progenitor cell | 9.60e-09 | 161 |
hematopoietic cell | 2.42e-08 | 177 |
myeloid leukocyte | 3.92e-08 | 72 |
myeloid cell | 5.25e-08 | 108 |
common myeloid progenitor | 5.25e-08 | 108 |
granulocyte monocyte progenitor cell | 2.41e-07 | 67 |
B cell | 3.21e-07 | 14 |
classical monocyte | 3.72e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.72e-07 | 42 |
plasmacytoid dendritic cell | 5.19e-07 | 3 |
neutrophil | 6.10e-07 | 3 |
macrophage dendritic cell progenitor | 9.84e-07 | 61 |