FFCP PHASE1:Hg19::chr17:1090622..1090652,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:1090622..1090652,-
|short_description=p12@ABR
|description=CAGE_peak_12_at_ABR_5end
|association_with_transcript=-6bp_to_ENST00000544583,NM_001159746,uc00...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=29 | |EntrezGene=29 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=81 | |HGNC=81 | ||
|TSSclassifier=strong | |||
|UniProt=F5H8B3 | |UniProt=F5H8B3 | ||
|association_with_transcript=-6bp_to_ENST00000544583,NM_001159746,uc002fse.2_5end | |||
|cluster_id=chr17:1090622..1090652,- | |||
|coexpression_cluster_id=C2393 | |||
|description=CAGE_peak_12_at_ABR_5end | |||
|id=chr17:1090622..1090652,- | |||
|ontology_enrichment_celltype=CL:0000147!8.74e-09!14;CL:0000148!1.56e-08!10;CL:0000541!1.56e-08!10 | |||
|ontology_enrichment_celltype_v019=CL:0000148;1.40e-08;10!CL:0002567;4.53e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.77e-08,10;CL:0000541,1.77e-08,10;CL:0002567,5.41e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.31e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.71e-32!57;UBERON:0005068!2.71e-32!57;UBERON:0006241!2.71e-32!57;UBERON:0007135!2.71e-32!57;UBERON:0003075!4.23e-31!86;UBERON:0007284!4.23e-31!86;UBERON:0005743!3.52e-29!86;UBERON:0002346!5.73e-29!90;UBERON:0007023!6.00e-29!115;UBERON:0001017!9.19e-27!82;UBERON:0000955!3.18e-26!69;UBERON:0006238!3.18e-26!69;UBERON:0000073!3.58e-26!94;UBERON:0001016!3.58e-26!94;UBERON:0002616!2.67e-25!59;UBERON:0002020!4.04e-24!34;UBERON:0003528!4.04e-24!34;UBERON:0001893!5.86e-24!34;UBERON:0002780!1.32e-23!41;UBERON:0001890!1.32e-23!41;UBERON:0006240!1.32e-23!41;UBERON:0003080!8.08e-23!42;UBERON:0003056!8.18e-23!61;UBERON:0002791!1.32e-22!33;UBERON:0001869!3.48e-22!32;UBERON:0000033!7.12e-18!123;UBERON:0001950!1.86e-17!20;UBERON:0002619!1.94e-17!22;UBERON:0000153!3.74e-17!129;UBERON:0007811!3.74e-17!129;UBERON:0000956!2.41e-16!25;UBERON:0000203!2.41e-16!25;UBERON:0004121!4.34e-15!169;UBERON:0000924!2.42e-14!173;UBERON:0006601!2.42e-14!173;UBERON:0003076!1.42e-10!15;UBERON:0003057!1.42e-10!15;UBERON:0000200!2.96e-10!6;UBERON:0000025!1.21e-09!194;UBERON:0002308!1.97e-09!9;UBERON:0000125!1.97e-09!9;UBERON:0000064!1.98e-07!219;UBERON:0004733!3.52e-07!12;UBERON:0002028!3.52e-07!12;UBERON:0007277!3.52e-07!12;UBERON:0000119!5.73e-07!312;UBERON:0002420!5.77e-07!9;UBERON:0007245!5.77e-07!9;UBERON:0010009!5.77e-07!9;UBERON:0010011!5.77e-07!9;UBERON:0000454!5.77e-07!9;UBERON:0009663!7.30e-07!7;UBERON:0000483!7.32e-07!309;UBERON:0002298!9.09e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.31e-53;20!UBERON:0002619;1.17e-48;22!UBERON:0000956;1.16e-42;25!UBERON:0000203;1.16e-42;25!UBERON:0001869;1.12e-37;32!UBERON:0001893;3.50e-36;34!UBERON:0003528;4.58e-34;34!UBERON:0002020;4.58e-34;34!UBERON:0002791;1.28e-32;32!UBERON:0000200;4.80e-31;6!UBERON:0002780;1.47e-21;41!UBERON:0001890;1.47e-21;41!UBERON:0000073;2.44e-20;53!UBERON:0002616;2.44e-20;53!UBERON:0001872;8.66e-18;5!UBERON:0002021;9.03e-18;5!UBERON:0001870;1.87e-16;3!UBERON:0002298;2.05e-14;6!UBERON:0001017;1.42e-13;75!UBERON:0000955;2.04e-13;68!UBERON:0002702;1.75e-11;2!UBERON:0002771;5.50e-11;2!UBERON:0001016;3.71e-10;83!UBERON:0000988;2.97e-08;3!UBERON:0001896;7.77e-08;3!UBERON:0005290;7.77e-08;3!UBERON:0004151;1.32e-07;3!UBERON:0007023;2.68e-07;114!UBERON:0004733;3.03e-07;12!UBERON:0002028;3.03e-07;12!UBERON:0001871;4.13e-07;6!UBERON:0002902;5.89e-07;1!UBERON:0009899;5.89e-07;1!UBERON:0002581;6.58e-07;1!UBERON:0007190;7.14e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,7.15e-54,20;UBERON:0002619,6.73e-49,22;UBERON:0000956,7.15e-43,25;UBERON:0000203,7.15e-43,25;UBERON:0001869,7.82e-43,32;UBERON:0001049,3.57e-40,56;UBERON:0005068,3.57e-40,56;UBERON:0006241,3.57e-40,56;UBERON:0007135,3.57e-40,56;UBERON:0001893,3.64e-40,34;UBERON:0003528,5.18e-40,34;UBERON:0002020,5.18e-40,34;UBERON:0000073,1.10e-38,53;UBERON:0002616,1.10e-38,53;UBERON:0002791,1.15e-37,32;UBERON:0003075,3.06e-34,82;UBERON:0007284,3.06e-34,82;UBERON:0002780,7.92e-33,41;UBERON:0001890,7.92e-33,41;UBERON:0003080,7.92e-33,41;UBERON:0006240,7.92e-33,41;UBERON:0002346,2.06e-32,86;UBERON:0000955,9.01e-32,68;UBERON:0006238,9.01e-32,68;UBERON:0000200,4.24e-31,6;UBERON:0001017,1.12e-28,81;UBERON:0007023,9.46e-28,114;UBERON:0010314,6.51e-27,132;UBERON:0003056,1.80e-26,61;UBERON:0010371,6.66e-26,104;UBERON:0001016,2.31e-25,89;UBERON:0002021,7.65e-18,5;UBERON:0001872,8.69e-18,5;UBERON:0001870,1.11e-16,3;UBERON:0004121,8.48e-15,171;UBERON:0000924,8.48e-15,171;UBERON:0006601,8.48e-15,171;UBERON:0002298,2.24e-14,6;UBERON:0000025,5.63e-14,192;UBERON:0002702,1.28e-11,2;UBERON:0002771,6.76e-11,2;UBERON:0004111,4.94e-10,240;UBERON:0011216,4.99e-09,223;UBERON:0003076,1.26e-08,15;UBERON:0003057,1.26e-08,15;UBERON:0000988,3.43e-08,3;UBERON:0000483,3.54e-08,306;UBERON:0000119,4.86e-08,309;UBERON:0001896,7.39e-08,3;UBERON:0005290,7.39e-08,3;UBERON:0010096,7.39e-08,3;UBERON:0004151,1.51e-07,3;UBERON:0004733,3.17e-07,12;UBERON:0002028,3.17e-07,12;UBERON:0007277,3.17e-07,12;UBERON:0001871,4.60e-07,6;UBERON:0002902,5.90e-07,1;UBERON:0009899,5.90e-07,1;UBERON:0002581,6.59e-07,1;UBERON:0007190,6.96e-07,1 | |||
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|short_description=p12@ABR | |||
}} | }} |
Latest revision as of 15:42, 18 September 2015
Short description: | p12@ABR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_ABR_5end |
Coexpression cluster: | C2393_Melanocyte_pons_occipital_postcentral_parietal_paracentral_medulla |
Association with transcript: | -6bp_to_ENST00000544583, NM_001159746, uc002fse.2_5end |
EntrezGene: | ABR |
HGNC: | 81 |
UniProt: | F5H8B3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.77e-08 | 10 |
melanoblast | 1.77e-08 | 10 |
light melanocyte | 5.41e-08 | 3 |