FFCP PHASE1:Hg19::chr10:20105340..20105382,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84898 | |EntrezGene=84898 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21013 | |HGNC=21013 | ||
|TSSclassifier=strong | |||
|UniProt=F5H554,Q6UX71 | |UniProt=F5H554,Q6UX71 | ||
|association_with_transcript=0bp_to_ENST00000536022,NM_032812,uc001iqg.1,uc001iqh.1_5end | |association_with_transcript=0bp_to_ENST00000536022,NM_032812,uc001iqg.1,uc001iqh.1_5end | ||
|cluster_id=chr10:20105340..20105382,+ | |||
|coexpression_cluster_id=C3005 | |||
|description=CAGE_peak_1_at_PLXDC2_5end | |description=CAGE_peak_1_at_PLXDC2_5end | ||
|id=chr10:20105340..20105382,+ | |id=chr10:20105340..20105382,+ | ||
|ontology_enrichment_celltype=CL:0000766!9.99e-33!76;CL:0002009!4.71e-29!65;CL:0000557!6.42e-29!71;CL:0002194!1.84e-28!63;CL:0000576!1.84e-28!63;CL:0000040!1.84e-28!63;CL:0000559!1.84e-28!63;CL:0002057!5.69e-27!42;CL:0000839!7.09e-27!70;CL:0000860!7.98e-23!45;CL:0000763!6.87e-19!112;CL:0000049!6.87e-19!112;CL:0000738!2.89e-08!140 | |ontology_enrichment_celltype=CL:0000766!9.99e-33!76;CL:0002009!4.71e-29!65;CL:0000557!6.42e-29!71;CL:0002194!1.84e-28!63;CL:0000576!1.84e-28!63;CL:0000040!1.84e-28!63;CL:0000559!1.84e-28!63;CL:0002057!5.69e-27!42;CL:0000839!7.09e-27!70;CL:0000860!7.98e-23!45;CL:0000763!6.87e-19!112;CL:0000049!6.87e-19!112;CL:0000738!2.89e-08!140 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.01e-21;39!CL:0000234;1.01e-21;39!CL:0000860;1.16e-21;33!CL:0002057;1.16e-21;33!CL:0000576;2.38e-19;48!CL:0000766;2.14e-16;69!CL:0000763;1.05e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.29e-38,72;CL:0002009,8.85e-35,61;CL:0002194,3.42e-34,59;CL:0000576,3.42e-34,59;CL:0000040,3.42e-34,59;CL:0000559,3.42e-34,59;CL:0000557,4.85e-34,67;CL:0000473,1.07e-32,48;CL:0000234,1.07e-32,48;CL:0000839,5.64e-31,66;CL:0000860,2.15e-28,42;CL:0002057,2.15e-28,42;CL:0000763,2.21e-21,108;CL:0000049,2.21e-21,108;CL:0000738,1.46e-10,136;CL:0002087,2.36e-08,115;CL:0002031,7.75e-08,120;CL:0000037,7.47e-07,168 | |||
|ontology_enrichment_development_v019=CL:0002057;1.49e-20;42!CL:0000049;3.84e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.62e-30!115;UBERON:0002390!1.13e-25!102;UBERON:0003061!1.13e-25!102;UBERON:0002371!4.98e-25!80;UBERON:0001474!3.92e-23!86;UBERON:0002193!4.77e-21!112;UBERON:0004765!1.08e-18!101;UBERON:0001434!1.08e-18!101;UBERON:0002405!9.22e-17!115;UBERON:0002204!2.47e-12!167;UBERON:0001049!3.69e-12!57;UBERON:0005068!3.69e-12!57;UBERON:0006241!3.69e-12!57;UBERON:0007135!3.69e-12!57;UBERON:0005743!2.83e-11!86;UBERON:0002616!3.07e-11!59;UBERON:0002346!3.26e-11!90;UBERON:0001017!1.24e-10!82;UBERON:0003075!1.60e-10!86;UBERON:0007284!1.60e-10!86;UBERON:0000922!2.33e-10!612;UBERON:0000955!4.35e-10!69;UBERON:0006238!4.35e-10!69;UBERON:0000062!8.76e-10!511;UBERON:0002050!9.95e-10!605;UBERON:0005423!9.95e-10!605;UBERON:0003080!1.13e-09!42;UBERON:0000073!1.41e-09!94;UBERON:0001016!1.41e-09!94;UBERON:0000923!1.53e-09!604;UBERON:0005291!1.53e-09!604;UBERON:0006598!1.53e-09!604;UBERON:0002532!1.53e-09!604;UBERON:0002780!3.06e-09!41;UBERON:0001890!3.06e-09!41;UBERON:0006240!3.06e-09!41;UBERON:0003081!3.59e-09!216;UBERON:0000468!1.67e-08!659;UBERON:0001893!9.87e-08!34;UBERON:0002020!9.98e-08!34;UBERON:0003528!9.98e-08!34;UBERON:0002791!1.62e-07!33;UBERON:0003056!5.20e-07!61;UBERON:0001869!6.59e-07!32 | |ontology_enrichment_uberon=UBERON:0007023!4.62e-30!115;UBERON:0002390!1.13e-25!102;UBERON:0003061!1.13e-25!102;UBERON:0002371!4.98e-25!80;UBERON:0001474!3.92e-23!86;UBERON:0002193!4.77e-21!112;UBERON:0004765!1.08e-18!101;UBERON:0001434!1.08e-18!101;UBERON:0002405!9.22e-17!115;UBERON:0002204!2.47e-12!167;UBERON:0001049!3.69e-12!57;UBERON:0005068!3.69e-12!57;UBERON:0006241!3.69e-12!57;UBERON:0007135!3.69e-12!57;UBERON:0005743!2.83e-11!86;UBERON:0002616!3.07e-11!59;UBERON:0002346!3.26e-11!90;UBERON:0001017!1.24e-10!82;UBERON:0003075!1.60e-10!86;UBERON:0007284!1.60e-10!86;UBERON:0000922!2.33e-10!612;UBERON:0000955!4.35e-10!69;UBERON:0006238!4.35e-10!69;UBERON:0000062!8.76e-10!511;UBERON:0002050!9.95e-10!605;UBERON:0005423!9.95e-10!605;UBERON:0003080!1.13e-09!42;UBERON:0000073!1.41e-09!94;UBERON:0001016!1.41e-09!94;UBERON:0000923!1.53e-09!604;UBERON:0005291!1.53e-09!604;UBERON:0006598!1.53e-09!604;UBERON:0002532!1.53e-09!604;UBERON:0002780!3.06e-09!41;UBERON:0001890!3.06e-09!41;UBERON:0006240!3.06e-09!41;UBERON:0003081!3.59e-09!216;UBERON:0000468!1.67e-08!659;UBERON:0001893!9.87e-08!34;UBERON:0002020!9.98e-08!34;UBERON:0003528!9.98e-08!34;UBERON:0002791!1.62e-07!33;UBERON:0003056!5.20e-07!61;UBERON:0001869!6.59e-07!32 | ||
|ontology_enrichment_uberon_v019=UBERON:0007023;2.52e-08;114!UBERON:0002780;7.04e-07;41!UBERON:0001890;7.04e-07;41 | |||
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|phase1_expression=93.2010085657955,43.6765068737606,111.635888044009,49.0359161930339,92.9679076408759,69.7870819280295,2.53299878168311,7.58063848112197,0.261185628199839,0.245733936501509,0,2.18441372130172,2.11013582582763,0.37129905888014,0.331397375727916,2.6893005858071,0,0,0.487932798790507,0.984968464614303,0.408001382488506,0.940364164434263,2.28988789704845,0.958120975510189,0.87879847716362,0,0,0,36.5828777469481,42.6050631887906,58.984942983425,0,0,0,0,0,9.39521405871511,65.3714582067615,83.4264901475789,59.8950003175751,102.553287201885,91.0141201513333,105.348407162382,106.286112547862,100.515001021223,135.119322081614,102.036347201596,97.4467894611727,107.777817071496,111.624648220994,98.1095506006455,156.314753956355,114.800311685294,87.1404322838165,123.238102800851,102.027348032092,85.4196249681057,126.294598258138,120.597053594136,129.334397911666,131.064110788803,88.0702971498532,98.9339741803294,134.687021168331,99.8319780882329,77.164390557995,96.5374485943141,102.006958094238,89.6950619682746,131.833628736006,102.312515945039,140.68205694725,124.053255876827,57.6726931631601,47.4107588922047,51.1567095040437,124.909437834903,122.844698344352,110.418478060894,36.4816311988798,42.7670855978044,34.7061892152804,0,1.63841583378639,0,4.26730222566507,0,2.87376219977242,0,0,0.569212969109448,0,1.52909291250092,30.3994055731759,24.6623767711876,12.3790519844286,0,0.393010762749165,1.23360899399706,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,1.27426165729639,0.651083453856419,0.950452044448374,6.77588035849977,4.22355816809581,6.24653632761729,5.6826540490564,0.821127996921047,0,0,0,14.6284119788377,4.69490601792545,8.05534139614241,18.0719576192283,5.0133791063589,10.8634889220618,44.5360130348616,50.1233916411715,6.33383274999255,5.32150553910154,9.48615685485761,19.8433299379035,0,0,59.0676256451524,62.1643162158384,57.7037548651875,3.10037811596945,2.28797964312051,3.71457501329565,0,0,0,0,0,0,0.208994966536811,0,0.35576626268671,0.33472061276467,0,0,0,0,0,0,0.22452937262617,0,0,0,0,64.572404543671,108.578473961531,0,2.48485975847659,5.44511200157693,1.32409180813219,11.7603014507014,4.61068896857864,3.92474320099615,3.20246987189115,2.71334303258876,5.91300967259556,5.79255889899659,2.45192854670188,6.20565453344219,8.06646294271999,0.234321431833797,0,0,0.149448680551801,0,0,0.280901613404497,0,0,0.516628905878827,0,1.7308685049499,0,0,0,0.375355559615893,0,0.438977620880838,2.45190236639216,2.25357088359895,3.28953331164061,0,0,0.211931901159562,0,0,0,0.558350568994769,2.02531598689519,1.75386609290158,0,0,0,0,0,0,0.386521706326594,1.09098448236334,0,1.58565817968474,1.85541675650079,1.74290914304278,4.04278114559945,5.2987378683882,1.09493207722749,0,1.92972281457866,1.38134921352481,0.928735856063958,0,0.473227200159376,0.168584690078102,0.241011029883482,0,0.435758888184812,0,0.269662616320329,0.196221465125346,0.38474715694639,1.4763109092493,0,4.115740113314,7.3504355692771,1.26755034821831,3.9313088667105,7.68026878685825,0,0,7.03428022223955,4.49976170175365,0,0.301586917234893,1.20364978706088,0,0,1.44331342025273,7.30361551342984,39.8015473459435,0,0,0.570762456703795,3.1608175918371,2.57545848628462,157.086449883759,200.541655224327,136.74066930563,1.87467667973554,5.03946384596579,1.27597587518148,2.23896306757121,0.871901815541886,1.91691339582606,8.86793828212698,0.352193736052904,9.95174954595706,12.9707958075265,6.05963680446624,0.063497894292169,0,0,0,0,1.20137223137567,0,0.336393253036082,1.74384027533312,0.22001485746285,21.4591048157911,0,0,22.8706780262989,10.4007436911366,0,0,0.266422179016099,27.5947527760225,4.34097284313154,0,0,24.5220444632357,0,40.091437148925,22.6598699236076,54.1853612206749,94.8665489001286,106.478503383611,94.8752727673642,10.5434936416296,4.59447743336456,1.42636905040718,4.77778312003011,2.67119219315498,5.90901178691655,0,3.34952292343276,0.431255149719035,3.46526197955321,1.52456774533478,0,3.09315525111078,4.18790663335872,0.637938751653163,101.864955256817,95.731666945288,112.721019654602,3.80343624329334,0,1.62759014219841,2.28767947683888,8.56459146226377,11.8276811275451,3.04567678981054,37.6182624659649,100.059301784633,12.4167685551006,5.31380478828349,1.84369168541703,0,0.391602314925481,1.37257369524342,56.0341350793025,45.0842679710909,33.9393633814953,0.303127571446259,3.32870879020994,0.604780586659361,56.3204723748623,47.2662877727232,19.6462066103152,63.5570180308277,44.5185306688032,43.430558708774,22.2627099667486,0,0.710246901252508,0,0,0,0.241718899183244,5.41367469818869,1.10497186723076,2.75554675595056,0,0,0.902399225814824,1.92538342761037,0,0,1.37217117560738,0,0.170093705276516,0,1.54227252690289,0.541892875087706,1.00337954770971,0.509752546090077,0.831076008928724,0,0.438519753291869,0.784306353074702,5.38545262744417,9.84043937099117,11.0628654185863,38.0221332980095,2.47237555009527,5.19809849499704,1.14853107599234,0.650060246036521,1.6068392984416,0.48335359146061,0.462145851343933,0.307007349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| ||
|short_description=p1@PLXDC2 | |short_description=p1@PLXDC2 | ||
}} | }} |
Latest revision as of 13:06, 17 September 2015
Short description: | p1@PLXDC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PLXDC2_5end |
Coexpression cluster: | C3005_Macrophage_CD14_Adipocyte_Osteoblast_Neutrophils_Eosinophils_Monocytederived |
Association with transcript: | 0bp_to_ENST00000536022, NM_032812, uc001iqg.1, uc001iqh.1_5end |
EntrezGene: | PLXDC2 |
HGNC: | 21013 |
UniProt: | F5H554Q6UX71 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 3.29e-38 | 72 |
macrophage dendritic cell progenitor | 8.85e-35 | 61 |
monopoietic cell | 3.42e-34 | 59 |
monocyte | 3.42e-34 | 59 |
monoblast | 3.42e-34 | 59 |
promonocyte | 3.42e-34 | 59 |
granulocyte monocyte progenitor cell | 4.85e-34 | 67 |
defensive cell | 1.07e-32 | 48 |
phagocyte | 1.07e-32 | 48 |
myeloid lineage restricted progenitor cell | 5.64e-31 | 66 |
classical monocyte | 2.15e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.15e-28 | 42 |
myeloid cell | 2.21e-21 | 108 |
common myeloid progenitor | 2.21e-21 | 108 |
leukocyte | 1.46e-10 | 136 |
nongranular leukocyte | 2.36e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 7.75e-08 | 120 |
hematopoietic stem cell | 7.47e-07 | 168 |