FFCP PHASE1:Hg19::chr17:5095296..5095308,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:5095296..5095308,+
|short_description=p2@LOC100130950
|description=CAGE_peak_2_at_LOC100130950_5end
|association_with_transcript=-70bp_to_NR_034082_5end
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=100130950 | |EntrezGene=100130950 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-70bp_to_NR_034082_5end | |||
|cluster_id=chr17:5095296..5095308,+ | |||
|coexpression_cluster_id=C652 | |||
|description=CAGE_peak_2_at_LOC100130950_5end | |||
|id=chr17:5095296..5095308,+ | |||
|ontology_enrichment_celltype=CL:0000838!3.06e-09!52;CL:0000542!1.07e-08!53;CL:0000051!1.07e-08!53 | |||
|ontology_enrichment_celltype_v019=CL:0000236;1.25e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,2.61e-08,14;CL:0000838,6.40e-08,52;CL:0000542,1.18e-07,53;CL:0000051,1.18e-07,53 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.63e-11;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.60e-35!115;UBERON:0001049!1.53e-27!57;UBERON:0005068!1.53e-27!57;UBERON:0006241!1.53e-27!57;UBERON:0007135!1.53e-27!57;UBERON:0002780!7.08e-24!41;UBERON:0001890!7.08e-24!41;UBERON:0006240!7.08e-24!41;UBERON:0002616!1.01e-23!59;UBERON:0003080!1.25e-22!42;UBERON:0000955!3.20e-21!69;UBERON:0006238!3.20e-21!69;UBERON:0001017!3.66e-20!82;UBERON:0002020!2.10e-19!34;UBERON:0003528!2.10e-19!34;UBERON:0005743!2.18e-19!86;UBERON:0001893!2.36e-19!34;UBERON:0002346!3.61e-19!90;UBERON:0002791!8.19e-19!33;UBERON:0000073!1.39e-18!94;UBERON:0001016!1.39e-18!94;UBERON:0001869!2.65e-18!32;UBERON:0003075!1.01e-17!86;UBERON:0007284!1.01e-17!86;UBERON:0002619!2.25e-15!22;UBERON:0000956!7.21e-15!25;UBERON:0000203!7.21e-15!25;UBERON:0001950!3.88e-14!20;UBERON:0003056!2.47e-12!61;UBERON:0000153!1.10e-08!129;UBERON:0007811!1.10e-08!129;UBERON:0000033!1.08e-07!123;UBERON:0000924!1.99e-07!173;UBERON:0006601!1.99e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;4.29e-30;41!UBERON:0001890;4.29e-30;41!UBERON:0002619;6.03e-30;22!UBERON:0001893;4.54e-28;34!UBERON:0003528;1.50e-27;34!UBERON:0002020;1.50e-27;34!UBERON:0001869;1.68e-27;32!UBERON:0002791;1.73e-27;32!UBERON:0001950;2.26e-27;20!UBERON:0000073;2.98e-27;53!UBERON:0002616;2.98e-27;53!UBERON:0000956;1.66e-25;25!UBERON:0000203;1.66e-25;25!UBERON:0000955;8.52e-16;68!UBERON:0001017;1.92e-14;75!UBERON:0001016;1.44e-12;83!UBERON:0007023;1.55e-12;114!UBERON:0001894;8.80e-11;7!UBERON:0001871;4.00e-10;6!UBERON:0002420;4.36e-09;9!UBERON:0007245;4.36e-09;9!UBERON:0010009;4.36e-09;9!UBERON:0010011;4.36e-09;9!UBERON:0000454;4.36e-09;9!UBERON:0000200;6.22e-09;6!UBERON:0000125;1.21e-08;9!UBERON:0002308;1.21e-08;9!UBERON:0001872;3.10e-08;5!UBERON:0004732;9.76e-08;13!UBERON:0002021;1.04e-07;5!UBERON:0000349;1.68e-07;5!UBERON:0003296;2.38e-07;4!UBERON:0010133;2.38e-07;4!UBERON:0002784;4.45e-07;4!UBERON:0004733;5.98e-07;12!UBERON:0002028;5.98e-07;12 | |||
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| ||
|short_description=p2@LOC100130950 | |||
}} | }} |
Latest revision as of 06:11, 16 September 2015
Short description: | p2@LOC100130950 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LOC100130950_5end |
Coexpression cluster: | C652_cerebellum_occipital_pineal_pituitary_medial_parietal_amygdala |
Association with transcript: | -70bp_to_NR_034082_5end |
EntrezGene: | LOC100130950 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 2.61e-08 | 14 |
lymphoid lineage restricted progenitor cell | 6.40e-08 | 52 |
lymphocyte | 1.18e-07 | 53 |
common lymphoid progenitor | 1.18e-07 | 53 |