FFCP PHASE1:Hg19::chr17:74236559..74236626,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:74236559..74236626,-
|short_description=p1@RNF157
|description=CAGE_peak_1_at_RNF157_5end
|association_with_transcript=-169bp_to_ENST00000269391,ENST00000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=114804 | |EntrezGene=114804 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29402 | |HGNC=29402 | ||
|TSSclassifier=strong | |||
|UniProt=Q96PX1,E9PHU5 | |UniProt=Q96PX1,E9PHU5 | ||
|association_with_transcript=-169bp_to_ENST00000269391,ENST00000301610,ENST00000319945,NM_052916,uc002jqz.2,uc002jra.2_5end | |||
|cluster_id=chr17:74236559..74236626,- | |||
|coexpression_cluster_id=C3679 | |||
|description=CAGE_peak_1_at_RNF157_5end | |||
|id=chr17:74236559..74236626,- | |||
|ontology_enrichment_celltype=CL:0000791!1.33e-07!18;CL:0000789!1.33e-07!18;CL:0002420!1.33e-07!18;CL:0002419!1.33e-07!18;CL:0000790!1.33e-07!18;CL:0000084!1.40e-07!25;CL:0000827!1.40e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000084;5.72e-09;25!CL:0000791;1.48e-08;18!CL:0000789;1.48e-08;18!CL:0002419;1.48e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,7.21e-09,25;CL:0000827,7.21e-09,25;CL:0000791,1.78e-08,18;CL:0000789,1.78e-08,18;CL:0002420,1.78e-08,18;CL:0002419,1.78e-08,18;CL:0000790,1.78e-08,18 | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.82e-11;82!CL:0000790;1.48e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.64e-35!94;UBERON:0001016!6.64e-35!94;UBERON:0005743!8.91e-33!86;UBERON:0001017!4.21e-32!82;UBERON:0007023!1.95e-31!115;UBERON:0001049!3.41e-30!57;UBERON:0005068!3.41e-30!57;UBERON:0006241!3.41e-30!57;UBERON:0007135!3.41e-30!57;UBERON:0000955!3.57e-28!69;UBERON:0006238!3.57e-28!69;UBERON:0002616!6.23e-25!59;UBERON:0003080!9.33e-24!42;UBERON:0002780!1.85e-23!41;UBERON:0001890!1.85e-23!41;UBERON:0006240!1.85e-23!41;UBERON:0003075!3.32e-23!86;UBERON:0007284!3.32e-23!86;UBERON:0002346!1.01e-21!90;UBERON:0001893!1.49e-20!34;UBERON:0002020!1.77e-20!34;UBERON:0003528!1.77e-20!34;UBERON:0004121!3.29e-20!169;UBERON:0002791!7.56e-20!33;UBERON:0001869!1.49e-19!32;UBERON:0000924!1.99e-19!173;UBERON:0006601!1.99e-19!173;UBERON:0003056!3.54e-19!61;UBERON:0000153!1.28e-18!129;UBERON:0007811!1.28e-18!129;UBERON:0000033!1.34e-17!123;UBERON:0002619!1.45e-15!22;UBERON:0000956!1.91e-15!25;UBERON:0000203!1.91e-15!25;UBERON:0001950!2.45e-14!20;UBERON:0000064!5.47e-08!219;UBERON:0003076!1.29e-07!15;UBERON:0003057!1.29e-07!15;UBERON:0004732!8.94e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;3.60e-20;34!UBERON:0001869;4.32e-20;32!UBERON:0003528;5.38e-20;34!UBERON:0002020;5.38e-20;34!UBERON:0002791;7.65e-20;32!UBERON:0002780;3.63e-19;41!UBERON:0001890;3.63e-19;41!UBERON:0000073;2.34e-18;53!UBERON:0002616;2.34e-18;53!UBERON:0002619;1.39e-17;22!UBERON:0000956;1.63e-17;25!UBERON:0000203;1.63e-17;25!UBERON:0001950;3.56e-16;20!UBERON:0000955;1.21e-13;68!UBERON:0001017;1.54e-13;75!UBERON:0001016;3.06e-13;83!UBERON:0007023;3.96e-09;114!UBERON:0004732;1.53e-07;13!UBERON:0002420;3.03e-07;9!UBERON:0007245;3.03e-07;9!UBERON:0010009;3.03e-07;9!UBERON:0010011;3.03e-07;9!UBERON:0000454;3.03e-07;9!UBERON:0000125;3.33e-07;9!UBERON:0002308;3.33e-07;9!UBERON:0004733;5.97e-07;12!UBERON:0002028;5.97e-07;12 | |||
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| ||
|short_description=p1@RNF157 | |||
}} | }} |
Latest revision as of 14:28, 17 September 2015
Short description: | p1@RNF157 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RNF157_5end |
Coexpression cluster: | C3679_occipital_cord_postcentral_NK_paracentral_parietal_temporal |
Association with transcript: | -169bp_to_ENST00000269391, ENST00000301610, ENST00000319945, NM_052916, uc002jqz.2, uc002jra.2_5end |
EntrezGene: | RNF157 |
HGNC: | 29402 |
UniProt: | Q96PX1E9PHU5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 7.21e-09 | 25 |
pro-T cell | 7.21e-09 | 25 |
mature alpha-beta T cell | 1.78e-08 | 18 |
alpha-beta T cell | 1.78e-08 | 18 |
immature T cell | 1.78e-08 | 18 |
mature T cell | 1.78e-08 | 18 |
immature alpha-beta T cell | 1.78e-08 | 18 |