FFCP PHASE1:Hg19::chr17:7983253..7983273,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:7983253..7983273,-
|short_description=p@chr17:7983253..7983273,-
|description=CAGE_peak_at_chr17:7983253..7983273,-
|association_with_transcript=NA
|Entr...") |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:7983253..7983273,- | |||
|description=CAGE_peak_at_chr17:7983253..7983273,- | |||
|id=chr17:7983253..7983273,- | |||
|ontology_enrichment_celltype=CL:0000082!8.68e-10!19 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.24e-11;82 | |||
|ontology_enrichment_disease=DOID:305!9.07e-15!106;DOID:0050687!3.64e-13!143;DOID:162!1.96e-10!235;DOID:0050615!3.14e-10!16;DOID:14566!7.91e-10!239;DOID:1324!2.57e-09!15;DOID:1749!1.50e-08!14;DOID:3905!3.00e-07!9;DOID:1325!7.87e-07!7;DOID:3904!7.87e-07!7 | |||
|ontology_enrichment_disease_v019=DOID:3347;7.02e-08;1!DOID:5409;4.61e-07;4!DOID:1324;8.11e-07;15 | |||
|ontology_enrichment_disease_v019_2=DOID:3347,8.28e-08,1;DOID:5409,4.76e-07,4;DOID:1324,7.56e-07,15 | |||
|ontology_enrichment_uberon=UBERON:0001049!4.85e-21!57;UBERON:0005068!4.85e-21!57;UBERON:0006241!4.85e-21!57;UBERON:0007135!4.85e-21!57;UBERON:0000955!3.76e-20!69;UBERON:0006238!3.76e-20!69;UBERON:0001017!3.95e-20!82;UBERON:0005743!1.18e-19!86;UBERON:0002780!7.01e-19!41;UBERON:0001890!7.01e-19!41;UBERON:0006240!7.01e-19!41;UBERON:0002616!9.99e-19!59;UBERON:0001950!1.05e-18!20;UBERON:0002619!1.17e-18!22;UBERON:0003080!3.21e-18!42;UBERON:0000073!1.40e-17!94;UBERON:0001016!1.40e-17!94;UBERON:0001869!1.59e-17!32;UBERON:0002020!1.88e-17!34;UBERON:0003528!1.88e-17!34;UBERON:0001893!2.30e-17!34;UBERON:0002791!2.84e-16!33;UBERON:0003075!8.44e-16!86;UBERON:0007284!8.44e-16!86;UBERON:0000956!9.39e-16!25;UBERON:0000203!9.39e-16!25;UBERON:0002346!1.59e-15!90;UBERON:0003056!5.88e-14!61;UBERON:0000033!7.38e-14!123;UBERON:0007023!9.55e-14!115;UBERON:0000153!3.05e-13!129;UBERON:0007811!3.05e-13!129;UBERON:0000064!1.34e-10!219;UBERON:0000924!2.65e-10!173;UBERON:0006601!2.65e-10!173;UBERON:0004121!2.75e-10!169;UBERON:0004802!8.68e-10!19;UBERON:0000115!8.68e-10!19;UBERON:0000200!1.05e-09!6;UBERON:0002048!5.93e-08!22;UBERON:0000117!5.93e-08!22;UBERON:0000171!5.93e-08!22;UBERON:0000170!5.93e-08!22;UBERON:0005597!5.93e-08!22;UBERON:0000118!5.93e-08!22;UBERON:0008947!2.12e-07!38;UBERON:0003258!2.12e-07!38;UBERON:0000072!2.13e-07!46;UBERON:0000065!4.54e-07!53;UBERON:0005153!5.89e-07!37;UBERON:0001871!6.49e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.72e-64;20!UBERON:0002619;1.26e-58;22!UBERON:0000956;1.61e-51;25!UBERON:0000203;1.61e-51;25!UBERON:0001869;1.56e-48;32!UBERON:0001893;1.21e-45;34!UBERON:0002791;1.72e-42;32!UBERON:0003528;6.71e-38;34!UBERON:0002020;6.71e-38;34!UBERON:0002780;5.26e-30;41!UBERON:0001890;5.26e-30;41!UBERON:0000200;3.50e-26;6!UBERON:0001872;1.31e-20;5!UBERON:0000073;1.98e-20;53!UBERON:0002616;1.98e-20;53!UBERON:0001870;2.06e-19;3!UBERON:0000955;6.35e-16;68!UBERON:0001017;9.84e-16;75!UBERON:0001871;1.08e-14;6!UBERON:0001876;2.88e-13;2!UBERON:0002702;2.88e-13;2!UBERON:0002021;3.25e-12;5!UBERON:0000349;1.23e-11;5!UBERON:0001016;4.67e-11;83!UBERON:0002902;4.57e-08;1!UBERON:0009899;4.57e-08;1!UBERON:0002581;4.88e-08;1!UBERON:0001882;1.79e-07;1!UBERON:0002022;1.79e-07;1!UBERON:0007190;1.79e-07;1!UBERON:0005403;1.79e-07;1!UBERON:0007023;5.85e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,1.19e-64,20;UBERON:0002619,8.99e-59,22;UBERON:0000956,1.20e-51,25;UBERON:0000203,1.20e-51,25;UBERON:0001869,1.59e-51,32;UBERON:0001893,2.20e-48,34;UBERON:0002791,1.31e-45,32;UBERON:0002780,9.98e-45,41;UBERON:0001890,9.98e-45,41;UBERON:0003080,9.98e-45,41;UBERON:0006240,9.98e-45,41;UBERON:0003528,8.09e-43,34;UBERON:0002020,8.09e-43,34;UBERON:0000073,4.03e-38,53;UBERON:0002616,4.03e-38,53;UBERON:0001049,6.53e-36,56;UBERON:0005068,6.53e-36,56;UBERON:0006241,6.53e-36,56;UBERON:0007135,6.53e-36,56;UBERON:0000955,1.83e-35,68;UBERON:0006238,1.83e-35,68;UBERON:0001017,2.15e-32,81;UBERON:0003056,4.09e-29,61;UBERON:0001016,8.58e-29,89;UBERON:0000200,2.13e-26,6;UBERON:0003075,1.92e-23,82;UBERON:0007284,1.92e-23,82;UBERON:0002346,3.46e-22,86;UBERON:0001872,1.92e-20,5;UBERON:0007023,3.61e-20,114;UBERON:0001870,1.37e-19,3;UBERON:0010371,1.03e-17,104;UBERON:0001871,9.73e-15,6;UBERON:0011216,8.34e-14,223;UBERON:0002702,1.44e-13,2;UBERON:0001876,2.89e-13,2;UBERON:0010314,3.64e-13,132;UBERON:0004121,3.99e-13,171;UBERON:0000924,3.99e-13,171;UBERON:0006601,3.99e-13,171;UBERON:0000025,1.25e-12,192;UBERON:0002021,2.64e-12,5;UBERON:0000349,1.37e-11,5;UBERON:0004111,3.40e-09,240;UBERON:0002902,4.57e-08,1;UBERON:0009899,4.57e-08,1;UBERON:0002581,4.89e-08,1;UBERON:0002022,1.69e-07,1;UBERON:0001882,2.17e-07,1;UBERON:0005403,2.17e-07,1;UBERON:0007190,2.31e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0.369754010166788,0,1.27952309238679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0,0.232387885739037,0.207322110030741,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0,0,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0.159426272728822,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0.390776190804081,0,0,0,0,0,0.18714054040822,0,0.242721043499027,0.891547074219827,0.284136146806413,0,0,0.307160702099232,1.9882952955326,1.1253553312841,0.111308705022906,0,0,0,0,0.251932747854276,0,0.492339221844278,0,0.179736702294654,0,0,0,0,0,1.93866549219044,2.96857914117924,0,0,0.262379999988587,0,0.227586896570999,0.762760950878299,0.236387681767936,0.344743373241465,0,0,0,0,0,0.884634079449797,0.295547618953547,2.19385397153973,0,0.697118721393016,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0.432777279484182,0,0,0.611030144933625,0.593042257361244,0.741383633679017,0.417687798021821,0.067401132980677,0,0,0,1.36965233252463,0,0,0,0,0,7.81681780955361,0.311064574191741,0,0,0,0,0.284609546029793,0.138674673013139,0,0.293977192243133,0.261177619741208,0,0,0,0,0,0,0.617792886840502,0.225980740780532,0,0,2.02594547058812,0.977756913674015,0.160317640503067,0,0.19980960958213,0.288180834308212,0,0,0,0.49701014226173,0,0.271808412147228,0,0,0,0,0.273810757783986,0,0,0.262887354279314,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0.544813624446302,0.160753148465019,0.137539436597234,0,0,0,1.64023802976667,0.670869375198532,0.157611414598396,0.157363764404994,0,0.537862017998534,1.72723677587501,0,0,0.5085370753095,0,0,0,0,0.082092520749339,0,0,0,0,0.258565912723101,0.39669780522807,2.39521573038061,0,0,0,0,0,0,0.121792598380896,1.27668251554036,0,0,0,0,0.314108192500469,1.77213635993397,2.68457782784319,1.752673029891,0,0.221858103073705,0.620964029413834,0.276697269872462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0.308801447160972,0,0.176689145945881,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0.862598491173454,0,0,0,0,0.371807292777007,0,0,0,0.80057074828547,0,0,1.34881372702565,2.8339315265117,0.957803154342908,1.64093091392604,0,4.01112064292464,0.807378228159255,0,0.196295437002051,0.11796972334774,0,0.115525666150338,0,2.0710797781803,0.795664888465099,0,0,0,0,0.163771917510097,0,1.2832141077495,1.56215619722769,1.2401207790071,2.28296916698065,0,0,0,0,0.127762427639595,0,0.336283722218824,0.606965604236632,0,0,0.115233987555779,0,2.03909198930495,3.55172977239385,0.354581522651905,0.222462803784138,0.078493092850514,0.785577949580009,0,0,0,0,0.285906176706625,0.316027223465453,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,1.39265542612958,1.18920090777569,0,0.329821550236287,1.81155412280008,0,0,0,0,0.707029641304878,0.196308467114945,0,0,0,0.0939839179798536,0,0,0.357107877211315,0,0.160482733378337,0,0,0,0,2.3117106664911,0.872701380680755,0,0,0,0,0,0.109265571963696,0.126698501011437,0.203977659483963,0.801652215796681,0,0,0.151557396436479,0,1.65833887891756,0.103432995861895,0.213233981900981,0,0,0,0.112131862580613,0,0,0.217716747896961,0,0.134704106029175,0,0,0,0,0,0.269475606319761,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0.369754010166788,0,1.27952309238679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0,0.232387885739037,0.207322110030741,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0,0,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0.159426272728822,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0.390776190804081,0,0,0,0,0,0.18714054040822,0,0.242721043499027,0.891547074219827,0.284136146806413,0,0,0.307160702099232,1.9882952955326,1.1253553312841,0.111308705022906,0,0,0,0,0.251932747854276,0,0.492339221844278,0,0.179736702294654,0,0,0,0,0,1.93866549219044,2.96857914117924,0,0,0.262379999988587,0,0.227586896570999,0.762760950878299,0.236387681767936,0.344743373241465,0,0,0,0,0,0.884634079449797,0.295547618953547,2.19385397153973,0,0.697118721393016,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0.432777279484182,0,0,0.611030144933625,0.593042257361244,0.741383633679017,0.417687798021821,0.067401132980677,0,0,0,1.36965233252463,0,0,0,0,0,7.81681780955361,0.311064574191741,0,0,0,0,0.284609546029793,0.138674673013139,0,0.293977192243133,0.261177619741208,0,0,0,0,0,0,0.617792886840502,0.225980740780532,0,0,2.02594547058812,0.977756913674015,0.160317640503067,0,0.19980960958213,0.288180834308212,0,0,0,0.49701014226173,0,0.271808412147228,0,0,0,0,0.273810757783986,0,0,0.262887354279314,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0.544813624446302,0.160753148465019,0.137539436597234,0,0,0,1.64023802976667,0.670869375198532,0.157611414598396,0.157363764404994,0,0.537862017998534,1.72723677587501,0,0,0.5085370753095,0,0,0,0,0.082092520749339,0,0,0,0,0.258565912723101,0.39669780522807,2.39521573038061,0,0,0,0,0,0,0.121792598380896,1.27668251554036,0,0,0,0,0.314108192500469,1.77213635993397,2.68457782784319,1.752673029891,0,0.221858103073705,0.620964029413834,0.276697269872462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0.308801447160972,0,0.176689145945881,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0.862598491173454,0,0,0,0,0.371807292777007,0,0,0,0.80057074828547,0,0,1.34881372702565,2.8339315265117,0.957803154342908,1.64093091392604,0,4.01112064292464,0.807378228159255,0,0.196295437002051,0.11796972334774,0,0.115525666150338,0,2.0710797781803,0.795664888465099,0,0,0,0,0.163771917510097,0,1.2832141077495,1.56215619722769,1.2401207790071,2.28296916698065,0,0,0,0,0.127762427639595,0,0.336283722218824,0.606965604236632,0,0,0.115233987555779,0,2.03909198930495,3.55172977239385,0.354581522651905,0.222462803784138,0.078493092850514,0.785577949580009,0,0,0,0,0.285906176706625,0.316027223465453,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,1.39265542612958,1.18920090777569,0,0.329821550236287,1.81155412280008,0,0,0,0,0.707029641304878,0.196308467114945,0,0,0,0.0939839179798536,0,0,0.357107877211315,0,0.160482733378337,0,0,0,0,2.3117106664911,0.872701380680755,0,0,0,0,0,0.109265571963696,0.126698501011437,0.203977659483963,0.801652215796681,0,0,0.151557396436479,0,1.65833887891756,0.103432995861895,0.213233981900981,0,0,0,0.112131862580613,0,0,0.217716747896961,0,0.134704106029175,0,0,0,0,0,0.269475606319761,0,0,0,0,0,0 | ||
|short_description=p@chr17:7983253..7983273,- | |||
}} | }} |
Latest revision as of 22:52, 25 July 2015
Short description: | p@chr17:7983253..7983273, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:7983253..7983273, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 8.28e-08 | 1 |
lung small cell carcinoma | 4.76e-07 | 4 |
lung cancer | 7.56e-07 | 15 |