FFCP PHASE1:Hg19::chr15:52821282..52821295,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4644 | |EntrezGene=4644 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7602 | |HGNC=7602 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y4I1,F8WE88,F5H363,Q9UES4,A8CDT9 | |UniProt=Q9Y4I1,F8WE88,F5H363,Q9UES4,A8CDT9 | ||
|association_with_transcript=-35bp_to_ENST00000356338,ENST00000399231,ENST00000399233,ENST00000546028,NM_000259,NM_001142495,uc002abx.3,uc002aby.2,uc010uge.1_5end | |association_with_transcript=-35bp_to_ENST00000356338,ENST00000399231,ENST00000399233,ENST00000546028,NM_000259,NM_001142495,uc002abx.3,uc002aby.2,uc010uge.1_5end | ||
|cluster_id=chr15:52821282..52821295,- | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_4_at_MYO5A_5end | |description=CAGE_peak_4_at_MYO5A_5end | ||
|id=chr15:52821282..52821295,- | |id=chr15:52821282..52821295,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000148;4.77e-18;10!CL:0000147;1.34e-12;14!CL:0002567;6.39e-12;3!CL:0000710;1.63e-08;20!CL:0000075;7.48e-08;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,4.67e-18,10;CL:0000541,4.67e-18,10;CL:0000147,1.32e-12,14;CL:0002567,6.66e-12,3;CL:0000710,1.61e-08,20;CL:0000075,7.09e-08,27 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.30e-11;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.78e-27!82;UBERON:0001049!2.74e-26!57;UBERON:0005068!2.74e-26!57;UBERON:0006241!2.74e-26!57;UBERON:0007135!2.74e-26!57;UBERON:0005743!5.31e-26!86;UBERON:0000073!2.82e-25!94;UBERON:0001016!2.82e-25!94;UBERON:0001893!2.11e-24!34;UBERON:0002020!1.08e-23!34;UBERON:0003528!1.08e-23!34;UBERON:0002791!1.52e-23!33;UBERON:0002780!1.89e-23!41;UBERON:0001890!1.89e-23!41;UBERON:0006240!1.89e-23!41;UBERON:0001869!1.92e-23!32;UBERON:0000955!5.99e-23!69;UBERON:0006238!5.99e-23!69;UBERON:0003080!1.91e-22!42;UBERON:0002616!6.05e-22!59;UBERON:0003075!9.49e-19!86;UBERON:0007284!9.49e-19!86;UBERON:0000956!4.36e-18!25;UBERON:0000203!4.36e-18!25;UBERON:0002346!1.97e-17!90;UBERON:0002619!3.16e-17!22;UBERON:0003056!2.52e-16!61;UBERON:0001950!7.01e-16!20;UBERON:0004121!1.01e-15!169;UBERON:0000924!5.06e-15!173;UBERON:0006601!5.06e-15!173;UBERON:0000033!8.08e-15!123;UBERON:0000153!1.53e-14!129;UBERON:0007811!1.53e-14!129;UBERON:0007023!1.19e-13!115;UBERON:0002420!8.23e-08!9;UBERON:0007245!8.23e-08!9;UBERON:0010009!8.23e-08!9;UBERON:0010011!8.23e-08!9;UBERON:0000454!8.23e-08!9;UBERON:0002308!4.77e-07!9;UBERON:0000125!4.77e-07!9 | |ontology_enrichment_uberon=UBERON:0001017!1.78e-27!82;UBERON:0001049!2.74e-26!57;UBERON:0005068!2.74e-26!57;UBERON:0006241!2.74e-26!57;UBERON:0007135!2.74e-26!57;UBERON:0005743!5.31e-26!86;UBERON:0000073!2.82e-25!94;UBERON:0001016!2.82e-25!94;UBERON:0001893!2.11e-24!34;UBERON:0002020!1.08e-23!34;UBERON:0003528!1.08e-23!34;UBERON:0002791!1.52e-23!33;UBERON:0002780!1.89e-23!41;UBERON:0001890!1.89e-23!41;UBERON:0006240!1.89e-23!41;UBERON:0001869!1.92e-23!32;UBERON:0000955!5.99e-23!69;UBERON:0006238!5.99e-23!69;UBERON:0003080!1.91e-22!42;UBERON:0002616!6.05e-22!59;UBERON:0003075!9.49e-19!86;UBERON:0007284!9.49e-19!86;UBERON:0000956!4.36e-18!25;UBERON:0000203!4.36e-18!25;UBERON:0002346!1.97e-17!90;UBERON:0002619!3.16e-17!22;UBERON:0003056!2.52e-16!61;UBERON:0001950!7.01e-16!20;UBERON:0004121!1.01e-15!169;UBERON:0000924!5.06e-15!173;UBERON:0006601!5.06e-15!173;UBERON:0000033!8.08e-15!123;UBERON:0000153!1.53e-14!129;UBERON:0007811!1.53e-14!129;UBERON:0007023!1.19e-13!115;UBERON:0002420!8.23e-08!9;UBERON:0007245!8.23e-08!9;UBERON:0010009!8.23e-08!9;UBERON:0010011!8.23e-08!9;UBERON:0000454!8.23e-08!9;UBERON:0002308!4.77e-07!9;UBERON:0000125!4.77e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001950;4.03e-68;20!UBERON:0002619;4.73e-68;22!UBERON:0001869;5.09e-64;32!UBERON:0000956;1.43e-59;25!UBERON:0000203;1.43e-59;25!UBERON:0002791;1.94e-59;32!UBERON:0001893;3.97e-58;34!UBERON:0003528;1.93e-54;34!UBERON:0002020;1.93e-54;34!UBERON:0002780;1.33e-42;41!UBERON:0001890;1.33e-42;41!UBERON:0000073;7.98e-35;53!UBERON:0002616;7.98e-35;53!UBERON:0000955;4.76e-29;68!UBERON:0001017;1.12e-25;75!UBERON:0000200;1.42e-22;6!UBERON:0001016;1.72e-20;83!UBERON:0001872;2.13e-19;5!UBERON:0002021;3.77e-19;5!UBERON:0001871;9.71e-19;6!UBERON:0002420;4.19e-15;9!UBERON:0007245;4.19e-15;9!UBERON:0010009;4.19e-15;9!UBERON:0010011;4.19e-15;9!UBERON:0000454;4.19e-15;9!UBERON:0000349;2.44e-12;5!UBERON:0001870;3.23e-12;3!UBERON:0000369;5.77e-10;4!UBERON:0002435;5.77e-10;4!UBERON:0000204;5.77e-10;4!UBERON:0007023;2.31e-09;114!UBERON:0009663;2.44e-09;7!UBERON:0002771;2.11e-08;2!UBERON:0001876;2.11e-08;2!UBERON:0002702;2.11e-08;2!UBERON:0011216;5.46e-08;132!UBERON:0000125;2.93e-07;9!UBERON:0002308;2.93e-07;9!UBERON:0004732;4.20e-07;13 | |||
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| ||
|short_description=p4@MYO5A | |short_description=p4@MYO5A | ||
}} | }} |
Latest revision as of 02:48, 18 September 2015
Short description: | p4@MYO5A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MYO5A_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -35bp_to_ENST00000356338, ENST00000399231, ENST00000399233, ENST00000546028, NM_000259, NM_001142495, uc002abx.3, uc002aby.2, uc010uge.1_5end |
EntrezGene: | MYO5A |
HGNC: | 7602 |
UniProt: | Q9Y4I1F8WE88F5H363Q9UES4A8CDT9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 4.67e-18 | 10 |
melanoblast | 4.67e-18 | 10 |
pigment cell | 1.32e-12 | 14 |
light melanocyte | 6.66e-12 | 3 |
neurecto-epithelial cell | 1.61e-08 | 20 |
columnar/cuboidal epithelial cell | 7.09e-08 | 27 |