FFCP PHASE1:Hg19::chr17:30813977..30814018,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8851 | |EntrezGene=8851 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1775 | |HGNC=1775 | ||
|TSSclassifier=strong | |||
|UniProt=Q15078,Q8N619 | |UniProt=Q15078,Q8N619 | ||
|association_with_transcript=-86bp_to_NM_003885,uc002hhn.2_5end | |association_with_transcript=-86bp_to_NM_003885,uc002hhn.2_5end | ||
|cluster_id=chr17:30813977..30814018,+ | |||
|coexpression_cluster_id=C10 | |coexpression_cluster_id=C10 | ||
|description=CAGE_peak_3_at_CDK5R1_5end | |description=CAGE_peak_3_at_CDK5R1_5end | ||
|id=chr17:30813977..30814018,+ | |id=chr17:30813977..30814018,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000148;2.27e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,2.34e-07,10;CL:0000541,2.34e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.75e-11;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.86e-37!82;UBERON:0005743!3.89e-36!86;UBERON:0000073!2.28e-34!94;UBERON:0001016!2.28e-34!94;UBERON:0001049!6.62e-34!57;UBERON:0005068!6.62e-34!57;UBERON:0006241!6.62e-34!57;UBERON:0007135!6.62e-34!57;UBERON:0000955!1.34e-30!69;UBERON:0006238!1.34e-30!69;UBERON:0002616!1.36e-28!59;UBERON:0002780!1.10e-27!41;UBERON:0001890!1.10e-27!41;UBERON:0006240!1.10e-27!41;UBERON:0003080!1.72e-26!42;UBERON:0001893!1.44e-23!34;UBERON:0002020!1.60e-23!34;UBERON:0003528!1.60e-23!34;UBERON:0001869!4.84e-23!32;UBERON:0002791!8.40e-23!33;UBERON:0003075!2.64e-22!86;UBERON:0007284!2.64e-22!86;UBERON:0004121!7.93e-22!169;UBERON:0000924!4.66e-21!173;UBERON:0006601!4.66e-21!173;UBERON:0002346!6.02e-21!90;UBERON:0002619!1.11e-18!22;UBERON:0003056!1.84e-18!61;UBERON:0000956!2.24e-18!25;UBERON:0000203!2.24e-18!25;UBERON:0001950!3.43e-17!20;UBERON:0007023!8.07e-17!115;UBERON:0000033!7.38e-16!123;UBERON:0000153!4.80e-15!129;UBERON:0007811!4.80e-15!129;UBERON:0003076!1.60e-08!15;UBERON:0003057!1.60e-08!15;UBERON:0000064!2.36e-08!219;UBERON:0001871!1.92e-07!7;UBERON:0004733!2.49e-07!12;UBERON:0002028!2.49e-07!12;UBERON:0007277!2.49e-07!12;UBERON:0002420!6.80e-07!9;UBERON:0007245!6.80e-07!9;UBERON:0010009!6.80e-07!9;UBERON:0010011!6.80e-07!9;UBERON:0000454!6.80e-07!9 | |ontology_enrichment_uberon=UBERON:0001017!1.86e-37!82;UBERON:0005743!3.89e-36!86;UBERON:0000073!2.28e-34!94;UBERON:0001016!2.28e-34!94;UBERON:0001049!6.62e-34!57;UBERON:0005068!6.62e-34!57;UBERON:0006241!6.62e-34!57;UBERON:0007135!6.62e-34!57;UBERON:0000955!1.34e-30!69;UBERON:0006238!1.34e-30!69;UBERON:0002616!1.36e-28!59;UBERON:0002780!1.10e-27!41;UBERON:0001890!1.10e-27!41;UBERON:0006240!1.10e-27!41;UBERON:0003080!1.72e-26!42;UBERON:0001893!1.44e-23!34;UBERON:0002020!1.60e-23!34;UBERON:0003528!1.60e-23!34;UBERON:0001869!4.84e-23!32;UBERON:0002791!8.40e-23!33;UBERON:0003075!2.64e-22!86;UBERON:0007284!2.64e-22!86;UBERON:0004121!7.93e-22!169;UBERON:0000924!4.66e-21!173;UBERON:0006601!4.66e-21!173;UBERON:0002346!6.02e-21!90;UBERON:0002619!1.11e-18!22;UBERON:0003056!1.84e-18!61;UBERON:0000956!2.24e-18!25;UBERON:0000203!2.24e-18!25;UBERON:0001950!3.43e-17!20;UBERON:0007023!8.07e-17!115;UBERON:0000033!7.38e-16!123;UBERON:0000153!4.80e-15!129;UBERON:0007811!4.80e-15!129;UBERON:0003076!1.60e-08!15;UBERON:0003057!1.60e-08!15;UBERON:0000064!2.36e-08!219;UBERON:0001871!1.92e-07!7;UBERON:0004733!2.49e-07!12;UBERON:0002028!2.49e-07!12;UBERON:0007277!2.49e-07!12;UBERON:0002420!6.80e-07!9;UBERON:0007245!6.80e-07!9;UBERON:0010009!6.80e-07!9;UBERON:0010011!6.80e-07!9;UBERON:0000454!6.80e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.30e-39;32!UBERON:0002619;2.30e-39;22!UBERON:0003528;8.56e-38;34!UBERON:0002020;8.56e-38;34!UBERON:0001893;1.14e-37;34!UBERON:0002791;5.27e-37;32!UBERON:0002780;4.02e-36;41!UBERON:0001890;4.02e-36;41!UBERON:0001950;4.57e-36;20!UBERON:0000956;7.29e-34;25!UBERON:0000203;7.29e-34;25!UBERON:0000073;6.69e-32;53!UBERON:0002616;6.69e-32;53!UBERON:0001017;3.61e-24;75!UBERON:0000955;2.09e-23;68!UBERON:0001016;2.99e-19;83!UBERON:0001871;6.89e-13;6!UBERON:0002420;9.02e-12;9!UBERON:0007245;9.02e-12;9!UBERON:0010009;9.02e-12;9!UBERON:0010011;9.02e-12;9!UBERON:0000454;9.02e-12;9!UBERON:0000200;1.23e-11;6!UBERON:0000125;3.65e-11;9!UBERON:0002308;3.65e-11;9!UBERON:0001872;6.49e-10;5!UBERON:0000349;6.96e-10;5!UBERON:0002021;9.32e-10;5!UBERON:0004733;9.39e-10;12!UBERON:0002028;9.39e-10;12!UBERON:0002298;4.45e-09;6!UBERON:0004732;7.53e-09;13!UBERON:0009663;1.72e-08;7!UBERON:0007023;1.96e-08;114!UBERON:0001894;4.28e-08;7!UBERON:0000369;1.10e-07;4!UBERON:0002435;1.10e-07;4!UBERON:0000204;1.10e-07;4!UBERON:0011216;4.21e-07;132!UBERON:0002784;5.12e-07;4 | |||
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| ||
|short_description=p3@CDK5R1 | |short_description=p3@CDK5R1 | ||
}} | }} |
Latest revision as of 12:29, 19 September 2015
Short description: | p3@CDK5R1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CDK5R1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -86bp_to_NM_003885, uc002hhn.2_5end |
EntrezGene: | CDK5R1 |
HGNC: | 1775 |
UniProt: | Q15078Q8N619 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 2.34e-07 | 10 |
melanoblast | 2.34e-07 | 10 |