FFCP PHASE1:Hg19::chr19:47778119..47778195,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=255783 | |EntrezGene=255783 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27406 | |HGNC=27406 | ||
|TSSclassifier=strong | |||
|UniProt=C9JVW0 | |UniProt=C9JVW0 | ||
|association_with_transcript=0bp_to_NM_178511,uc002pgi.2_5end | |association_with_transcript=0bp_to_NM_178511,uc002pgi.2_5end | ||
|cluster_id=chr19:47778119..47778195,+ | |||
|coexpression_cluster_id=C193 | |coexpression_cluster_id=C193 | ||
|description=CAGE_peak_1_at_PRR24_5end | |description=CAGE_peak_1_at_PRR24_5end | ||
|id=chr19:47778119..47778195,+ | |id=chr19:47778119..47778195,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.61e-26!180;CL:0000183!7.60e-16!59;CL:0000393!4.63e-15!60;CL:0000211!4.63e-15!60;CL:0000680!1.05e-14!57;CL:0000056!1.05e-14!57;CL:0000355!1.05e-14!57;CL:0000187!1.36e-14!54;CL:0000192!5.30e-11!42;CL:0000514!5.30e-11!42;CL:0000057!5.11e-10!75;CL:0000359!1.41e-07!32 | |ontology_enrichment_celltype=CL:0000055!2.61e-26!180;CL:0000183!7.60e-16!59;CL:0000393!4.63e-15!60;CL:0000211!4.63e-15!60;CL:0000680!1.05e-14!57;CL:0000056!1.05e-14!57;CL:0000355!1.05e-14!57;CL:0000187!1.36e-14!54;CL:0000192!5.30e-11!42;CL:0000514!5.30e-11!42;CL:0000057!5.11e-10!75;CL:0000359!1.41e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0000187;1.64e-09;55!CL:0000393;3.02e-09;61!CL:0000211;3.02e-09;61!CL:0000192;7.41e-09;43!CL:0000359;1.42e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,1.26e-16,61;CL:0000211,1.26e-16,61;CL:0000680,2.01e-16,58;CL:0000056,2.01e-16,58;CL:0000355,2.01e-16,58;CL:0000187,2.68e-16,55;CL:0000192,4.49e-12,43;CL:0000514,4.49e-12,43;CL:0000057,2.31e-10,76;CL:0000359,6.99e-08,32;CL:0002494,9.38e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000355;3.54e-09;58!CL:0000514;7.41e-09;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.12e-23!365;UBERON:0000481!1.01e-18!347;UBERON:0000119!3.90e-17!312;UBERON:0000483!1.50e-16!309;UBERON:0005743!2.91e-16!86;UBERON:0001017!4.71e-16!82;UBERON:0002385!2.53e-15!63;UBERON:0001015!2.53e-15!63;UBERON:0000383!2.53e-15!63;UBERON:0000073!3.92e-15!94;UBERON:0001016!3.92e-15!94;UBERON:0001134!4.25e-15!61;UBERON:0002036!4.25e-15!61;UBERON:0003082!4.25e-15!61;UBERON:0004290!9.87e-15!70;UBERON:0003075!1.02e-14!86;UBERON:0007284!1.02e-14!86;UBERON:0000914!3.97e-14!83;UBERON:0002329!3.97e-14!83;UBERON:0003077!3.97e-14!83;UBERON:0003059!3.97e-14!83;UBERON:0007282!3.97e-14!83;UBERON:0009618!3.97e-14!83;UBERON:0007285!3.97e-14!83;UBERON:0002346!4.20e-14!90;UBERON:0000955!1.54e-13!69;UBERON:0006238!1.54e-13!69;UBERON:0000025!1.67e-13!194;UBERON:0001049!2.15e-13!57;UBERON:0005068!2.15e-13!57;UBERON:0006241!2.15e-13!57;UBERON:0007135!2.15e-13!57;UBERON:0002616!2.79e-13!59;UBERON:0004111!4.96e-13!241;UBERON:0000477!9.65e-13!286;UBERON:0004121!2.41e-12!169;UBERON:0000924!4.37e-12!173;UBERON:0006601!4.37e-12!173;UBERON:0000033!7.67e-12!123;UBERON:0000468!2.09e-11!659;UBERON:0005256!3.18e-11!143;UBERON:0000153!5.89e-11!129;UBERON:0007811!5.89e-11!129;UBERON:0007023!7.47e-11!115;UBERON:0000486!8.24e-11!82;UBERON:0002100!1.78e-10!216;UBERON:0000479!1.51e-09!787;UBERON:0002619!2.51e-09!22;UBERON:0000956!3.23e-09!25;UBERON:0000203!3.23e-09!25;UBERON:0003056!3.23e-09!61;UBERON:0002020!3.48e-09!34;UBERON:0003528!3.48e-09!34;UBERON:0001869!4.30e-09!32;UBERON:0001893!7.27e-09!34;UBERON:0001950!7.35e-09!20;UBERON:0002050!9.03e-09!605;UBERON:0005423!9.03e-09!605;UBERON:0003080!9.75e-09!42;UBERON:0000922!1.20e-08!612;UBERON:0004872!1.28e-08!84;UBERON:0000923!1.42e-08!604;UBERON:0005291!1.42e-08!604;UBERON:0006598!1.42e-08!604;UBERON:0002532!1.42e-08!604;UBERON:0002780!1.53e-08!41;UBERON:0001890!1.53e-08!41;UBERON:0006240!1.53e-08!41;UBERON:0002791!1.83e-08!33;UBERON:0000467!1.92e-08!625;UBERON:0000480!2.60e-08!626;UBERON:0000064!3.11e-07!219;UBERON:0007100!4.34e-07!27;UBERON:0000948!4.37e-07!24;UBERON:0005498!4.37e-07!24;UBERON:0004140!4.37e-07!24;UBERON:0009881!4.37e-07!24;UBERON:0004141!4.37e-07!24;UBERON:0003084!4.37e-07!24;UBERON:0007005!4.37e-07!24;UBERON:0004139!4.37e-07!24;UBERON:0004291!4.37e-07!24;UBERON:0001013!4.89e-07!14 | |ontology_enrichment_uberon=UBERON:0000475!1.12e-23!365;UBERON:0000481!1.01e-18!347;UBERON:0000119!3.90e-17!312;UBERON:0000483!1.50e-16!309;UBERON:0005743!2.91e-16!86;UBERON:0001017!4.71e-16!82;UBERON:0002385!2.53e-15!63;UBERON:0001015!2.53e-15!63;UBERON:0000383!2.53e-15!63;UBERON:0000073!3.92e-15!94;UBERON:0001016!3.92e-15!94;UBERON:0001134!4.25e-15!61;UBERON:0002036!4.25e-15!61;UBERON:0003082!4.25e-15!61;UBERON:0004290!9.87e-15!70;UBERON:0003075!1.02e-14!86;UBERON:0007284!1.02e-14!86;UBERON:0000914!3.97e-14!83;UBERON:0002329!3.97e-14!83;UBERON:0003077!3.97e-14!83;UBERON:0003059!3.97e-14!83;UBERON:0007282!3.97e-14!83;UBERON:0009618!3.97e-14!83;UBERON:0007285!3.97e-14!83;UBERON:0002346!4.20e-14!90;UBERON:0000955!1.54e-13!69;UBERON:0006238!1.54e-13!69;UBERON:0000025!1.67e-13!194;UBERON:0001049!2.15e-13!57;UBERON:0005068!2.15e-13!57;UBERON:0006241!2.15e-13!57;UBERON:0007135!2.15e-13!57;UBERON:0002616!2.79e-13!59;UBERON:0004111!4.96e-13!241;UBERON:0000477!9.65e-13!286;UBERON:0004121!2.41e-12!169;UBERON:0000924!4.37e-12!173;UBERON:0006601!4.37e-12!173;UBERON:0000033!7.67e-12!123;UBERON:0000468!2.09e-11!659;UBERON:0005256!3.18e-11!143;UBERON:0000153!5.89e-11!129;UBERON:0007811!5.89e-11!129;UBERON:0007023!7.47e-11!115;UBERON:0000486!8.24e-11!82;UBERON:0002100!1.78e-10!216;UBERON:0000479!1.51e-09!787;UBERON:0002619!2.51e-09!22;UBERON:0000956!3.23e-09!25;UBERON:0000203!3.23e-09!25;UBERON:0003056!3.23e-09!61;UBERON:0002020!3.48e-09!34;UBERON:0003528!3.48e-09!34;UBERON:0001869!4.30e-09!32;UBERON:0001893!7.27e-09!34;UBERON:0001950!7.35e-09!20;UBERON:0002050!9.03e-09!605;UBERON:0005423!9.03e-09!605;UBERON:0003080!9.75e-09!42;UBERON:0000922!1.20e-08!612;UBERON:0004872!1.28e-08!84;UBERON:0000923!1.42e-08!604;UBERON:0005291!1.42e-08!604;UBERON:0006598!1.42e-08!604;UBERON:0002532!1.42e-08!604;UBERON:0002780!1.53e-08!41;UBERON:0001890!1.53e-08!41;UBERON:0006240!1.53e-08!41;UBERON:0002791!1.83e-08!33;UBERON:0000467!1.92e-08!625;UBERON:0000480!2.60e-08!626;UBERON:0000064!3.11e-07!219;UBERON:0007100!4.34e-07!27;UBERON:0000948!4.37e-07!24;UBERON:0005498!4.37e-07!24;UBERON:0004140!4.37e-07!24;UBERON:0009881!4.37e-07!24;UBERON:0004141!4.37e-07!24;UBERON:0003084!4.37e-07!24;UBERON:0007005!4.37e-07!24;UBERON:0004139!4.37e-07!24;UBERON:0004291!4.37e-07!24;UBERON:0001013!4.89e-07!14 | ||
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| ||
|short_description=p1@PRR24 | |short_description=p1@PRR24 | ||
}} | }} |
Latest revision as of 23:10, 18 September 2015
Short description: | p1@PRR24 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PRR24_5end |
Coexpression cluster: | C193_Mesenchymal_Adipocyte_mature_Cardiac_heart_CD14CD16_CD14 |
Association with transcript: | 0bp_to_NM_178511, uc002pgi.2_5end |
EntrezGene: | PRR24 |
HGNC: | 27406 |
UniProt: | C9JVW0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 1.26e-16 | 61 |
electrically active cell | 1.26e-16 | 61 |
muscle precursor cell | 2.01e-16 | 58 |
myoblast | 2.01e-16 | 58 |
multi-potent skeletal muscle stem cell | 2.01e-16 | 58 |
muscle cell | 2.68e-16 | 55 |
smooth muscle cell | 4.49e-12 | 43 |
smooth muscle myoblast | 4.49e-12 | 43 |
fibroblast | 2.31e-10 | 76 |
vascular associated smooth muscle cell | 6.99e-08 | 32 |
cardiocyte | 9.38e-07 | 16 |