FFCP PHASE1:Hg19::chr1:77747656..77747766,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26289 | |EntrezGene=26289 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=365 | |HGNC=365 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y6K8,Q8N291 | |UniProt=Q9Y6K8,Q8N291 | ||
|association_with_transcript=0bp_to_ENST00000317704,ENST00000354567,NM_174858,uc001dhm.1,uc001dhn.2_5end | |association_with_transcript=0bp_to_ENST00000317704,ENST00000354567,NM_174858,uc001dhm.1,uc001dhn.2_5end | ||
|cluster_id=chr1:77747656..77747766,+ | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_1_at_AK5_5end | |description=CAGE_peak_1_at_AK5_5end | ||
|id=chr1:77747656..77747766,+ | |id=chr1:77747656..77747766,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.55e-29!180;CL:0000057!2.40e-18!75;CL:0002620!4.45e-12!23;CL:0000680!1.64e-11!57;CL:0000056!1.64e-11!57;CL:0000355!1.64e-11!57;CL:0000183!8.61e-11!59;CL:0000187!1.59e-10!54;CL:0000222!1.37e-09!119;CL:0000393!1.97e-09!60;CL:0000211!1.97e-09!60;CL:0000192!4.08e-09!42;CL:0000514!4.08e-09!42;CL:0000359!3.46e-07!32 | |ontology_enrichment_celltype=CL:0000055!3.55e-29!180;CL:0000057!2.40e-18!75;CL:0002620!4.45e-12!23;CL:0000680!1.64e-11!57;CL:0000056!1.64e-11!57;CL:0000355!1.64e-11!57;CL:0000183!8.61e-11!59;CL:0000187!1.59e-10!54;CL:0000222!1.37e-09!119;CL:0000393!1.97e-09!60;CL:0000211!1.97e-09!60;CL:0000192!4.08e-09!42;CL:0000514!4.08e-09!42;CL:0000359!3.46e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.13e-12;23!CL:0000057;2.13e-07;73!CL:0000192;2.96e-07;43!CL:0000359;3.53e-07;32!CL:0000187;7.20e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.79e-19,76;CL:0002620,1.14e-12,23;CL:0000680,1.85e-12,58;CL:0000056,1.85e-12,58;CL:0000355,1.85e-12,58;CL:0000187,2.07e-11,55;CL:0000393,5.30e-10,61;CL:0000211,5.30e-10,61;CL:0000192,6.31e-10,43;CL:0000514,6.31e-10,43;CL:0000222,7.12e-10,121;CL:0000359,1.66e-07,32 | |||
|ontology_enrichment_development_v019=CL:0000514;2.96e-07;43!CL:0000355;3.51e-07;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002619;3.10e-14;22!UBERON:0001893;4.01e-14;34!UBERON:0003528;1.01e-13;34!UBERON:0002020;1.01e-13;34!UBERON:0001869;1.28e-13;32!UBERON:0002791;1.53e-13;32!UBERON:0001950;7.55e-13;20!UBERON:0002780;3.89e-12;41!UBERON:0001890;3.89e-12;41!UBERON:0000956;6.04e-11;25!UBERON:0000203;6.04e-11;25!UBERON:0000073;9.24e-11;53!UBERON:0002616;9.24e-11;53!UBERON:0000955;2.32e-08;68!UBERON:0001017;4.82e-08;75!UBERON:0002097;8.79e-08;41!UBERON:0002420;2.80e-07;9!UBERON:0007245;2.80e-07;9!UBERON:0010009;2.80e-07;9!UBERON:0010011;2.80e-07;9!UBERON:0000454;2.80e-07;9!UBERON:0000125;5.12e-07;9!UBERON:0002308;5.12e-07;9!UBERON:0002199;5.58e-07;46!UBERON:0002416;5.58e-07;46!UBERON:0001016;8.78e-07;83 | |||
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| ||
|short_description=p1@AK5 | |short_description=p1@AK5 | ||
}} | }} |
Latest revision as of 06:51, 19 September 2015
Short description: | p1@AK5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AK5_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000317704, ENST00000354567, NM_174858, uc001dhm.1, uc001dhn.2_5end |
EntrezGene: | AK5 |
HGNC: | 365 |
UniProt: | Q9Y6K8Q8N291 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.79e-19 | 76 |
skin fibroblast | 1.14e-12 | 23 |
muscle precursor cell | 1.85e-12 | 58 |
myoblast | 1.85e-12 | 58 |
multi-potent skeletal muscle stem cell | 1.85e-12 | 58 |
muscle cell | 2.07e-11 | 55 |
electrically responsive cell | 5.30e-10 | 61 |
electrically active cell | 5.30e-10 | 61 |
smooth muscle cell | 6.31e-10 | 43 |
smooth muscle myoblast | 6.31e-10 | 43 |
mesodermal cell | 7.12e-10 | 121 |
vascular associated smooth muscle cell | 1.66e-07 | 32 |