FFCP PHASE1:Hg19::chr11:62752284..62752304,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9356 | |EntrezGene=9356 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10970 | |HGNC=10970 | ||
|TSSclassifier=strong | |||
|UniProt=F5H0T7 | |UniProt=F5H0T7 | ||
|association_with_transcript=0bp_to_ENST00000540654_5end | |association_with_transcript=0bp_to_ENST00000540654_5end | ||
|cluster_id=chr11:62752284..62752304,- | |||
|coexpression_cluster_id=C2149 | |coexpression_cluster_id=C2149 | ||
|description=CAGE_peak_3_at_SLC22A6_5end | |description=CAGE_peak_3_at_SLC22A6_5end | ||
|id=chr11:62752284..62752304,- | |id=chr11:62752284..62752304,- | ||
|ontology_enrichment_celltype=CL:0002575;1.15e-15;2!CL:0000669;2.89e-08;4 | |ontology_enrichment_celltype=CL:0002575!2.61e-09!2 | ||
| | |ontology_enrichment_celltype_v019=CL:0002575;1.15e-15;2!CL:0000669;2.89e-08;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002575,1.15e-15,2;CL:0000669,2.89e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.44e-10;3!UBERON:0003057;1.44e-10;3!UBERON:0006601;1.73e-10;82!UBERON:0006215;6.81e-10;3!UBERON:0010115;4.89e-08;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
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|ontology_enrichment_disease_v019_2= | |||
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|short_description=p3@SLC22A6 | |short_description=p3@SLC22A6 | ||
}} | }} |
Latest revision as of 22:30, 18 September 2015
Short description: | p3@SLC22A6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SLC22A6_5end |
Coexpression cluster: | C2149_Pericytes_spinal_kidney_cerebral_temporal_duodenum_retina |
Association with transcript: | 0bp_to_ENST00000540654_5end |
EntrezGene: | SLC22A6 |
HGNC: | 10970 |
UniProt: | F5H0T7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 1.15e-15 | 2 |
pericyte cell | 2.89e-08 | 4 |