FFCP PHASE1:Hg19::chr9:139874396..139874457,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5730 | |EntrezGene=5730 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9592 | |HGNC=9592 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=28bp_to_ENST00000462514_5end | |association_with_transcript=28bp_to_ENST00000462514_5end | ||
|cluster_id=chr9:139874396..139874457,+ | |||
|coexpression_cluster_id=C485 | |coexpression_cluster_id=C485 | ||
|description=CAGE_peak_4_at_PTGDS_5end | |description=CAGE_peak_4_at_PTGDS_5end | ||
|id=chr9:139874396..139874457,+ | |id=chr9:139874396..139874457,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.58e-15;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0003528;1.60e-32;34!UBERON:0002020;1.60e-32;34!UBERON:0002791;1.65e-32;32!UBERON:0001893;2.10e-32;34!UBERON:0001869;3.07e-32;32!UBERON:0002780;1.59e-31;41!UBERON:0001890;1.59e-31;41!UBERON:0002619;4.66e-30;22!UBERON:0000073;2.40e-29;53!UBERON:0002616;2.40e-29;53!UBERON:0001950;5.63e-27;20!UBERON:0000956;8.94e-26;25!UBERON:0000203;8.94e-26;25!UBERON:0001017;1.60e-23;75!UBERON:0000955;2.01e-23;68!UBERON:0007023;3.63e-20;114!UBERON:0001016;5.97e-19;83!UBERON:0002420;9.15e-15;9!UBERON:0007245;9.15e-15;9!UBERON:0010009;9.15e-15;9!UBERON:0010011;9.15e-15;9!UBERON:0000454;9.15e-15;9!UBERON:0000125;1.01e-14;9!UBERON:0002308;1.01e-14;9!UBERON:0004732;9.40e-12;13!UBERON:0009663;1.01e-11;7!UBERON:0001871;1.97e-11;6!UBERON:0004733;3.55e-10;12!UBERON:0002028;3.55e-10;12!UBERON:0002298;4.31e-10;6!UBERON:0000200;8.55e-10;6!UBERON:0000349;9.77e-09;5!UBERON:0002021;1.42e-08;5!UBERON:0011216;2.07e-08;132!UBERON:0000369;5.39e-07;4!UBERON:0002435;5.39e-07;4!UBERON:0000204;5.39e-07;4 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.43e-59!115;UBERON:0002616!1.56e-34!59;UBERON:0001049!3.92e-34!57;UBERON:0005068!3.92e-34!57;UBERON:0006241!3.92e-34!57;UBERON:0007135!3.92e-34!57;UBERON:0005743!1.61e-32!86;UBERON:0000955!3.84e-31!69;UBERON:0006238!3.84e-31!69;UBERON:0001017!6.97e-30!82;UBERON:0000073!1.73e-28!94;UBERON:0001016!1.73e-28!94;UBERON:0003075!6.04e-28!86;UBERON:0007284!6.04e-28!86;UBERON:0002780!1.23e-27!41;UBERON:0001890!1.23e-27!41;UBERON:0006240!1.23e-27!41;UBERON:0003080!1.30e-26!42;UBERON:0002346!1.37e-26!90;UBERON:0002020!7.39e-24!34;UBERON:0003528!7.39e-24!34;UBERON:0001893!1.33e-23!34;UBERON:0002791!6.64e-23!33;UBERON:0001869!7.21e-22!32;UBERON:0003056!1.06e-19!61;UBERON:0002619!1.43e-19!22;UBERON:0000153!6.67e-18!129;UBERON:0007811!6.67e-18!129;UBERON:0000033!6.76e-18!123;UBERON:0001950!9.60e-18!20;UBERON:0000956!3.25e-16!25;UBERON:0000203!3.25e-16!25;UBERON:0004121!7.29e-15!169;UBERON:0000924!1.88e-14!173;UBERON:0006601!1.88e-14!173;UBERON:0000062!4.00e-12!511;UBERON:0000064!9.23e-10!219;UBERON:0000475!1.47e-09!365;UBERON:0002420!2.58e-09!9;UBERON:0007245!2.58e-09!9;UBERON:0010009!2.58e-09!9;UBERON:0010011!2.58e-09!9;UBERON:0000454!2.58e-09!9;UBERON:0002308!2.73e-09!9;UBERON:0000125!2.73e-09!9;UBERON:0003076!1.28e-08!15;UBERON:0003057!1.28e-08!15;UBERON:0000468!2.06e-08!659;UBERON:0001871!4.83e-08!7;UBERON:0009663!1.59e-07!7;UBERON:0000481!4.68e-07!347;UBERON:0004732!6.06e-07!13;UBERON:0000483!7.59e-07!309;UBERON:0000467!7.62e-07!625;UBERON:0000119!7.94e-07!312;UBERON:0000477!8.12e-07!286;UBERON:0000480!9.34e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.60e-32;34!UBERON:0002020;1.60e-32;34!UBERON:0002791;1.65e-32;32!UBERON:0001893;2.10e-32;34!UBERON:0001869;3.07e-32;32!UBERON:0002780;1.59e-31;41!UBERON:0001890;1.59e-31;41!UBERON:0002619;4.66e-30;22!UBERON:0000073;2.40e-29;53!UBERON:0002616;2.40e-29;53!UBERON:0001950;5.63e-27;20!UBERON:0000956;8.94e-26;25!UBERON:0000203;8.94e-26;25!UBERON:0001017;1.60e-23;75!UBERON:0000955;2.01e-23;68!UBERON:0007023;3.63e-20;114!UBERON:0001016;5.97e-19;83!UBERON:0002420;9.15e-15;9!UBERON:0007245;9.15e-15;9!UBERON:0010009;9.15e-15;9!UBERON:0010011;9.15e-15;9!UBERON:0000454;9.15e-15;9!UBERON:0000125;1.01e-14;9!UBERON:0002308;1.01e-14;9!UBERON:0004732;9.40e-12;13!UBERON:0009663;1.01e-11;7!UBERON:0001871;1.97e-11;6!UBERON:0004733;3.55e-10;12!UBERON:0002028;3.55e-10;12!UBERON:0002298;4.31e-10;6!UBERON:0000200;8.55e-10;6!UBERON:0000349;9.77e-09;5!UBERON:0002021;1.42e-08;5!UBERON:0011216;2.07e-08;132!UBERON:0000369;5.39e-07;4!UBERON:0002435;5.39e-07;4!UBERON:0000204;5.39e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.46e-73,114;UBERON:0001049,9.94e-58,56;UBERON:0005068,9.94e-58,56;UBERON:0006241,9.94e-58,56;UBERON:0007135,9.94e-58,56;UBERON:0000073,9.14e-53,53;UBERON:0002616,9.14e-53,53;UBERON:0001017,7.18e-52,81;UBERON:0000955,1.57e-51,68;UBERON:0006238,1.57e-51,68;UBERON:0001016,3.35e-47,89;UBERON:0003075,1.37e-46,82;UBERON:0007284,1.37e-46,82;UBERON:0002346,1.23e-43,86;UBERON:0002780,1.29e-43,41;UBERON:0001890,1.29e-43,41;UBERON:0003080,1.29e-43,41;UBERON:0006240,1.29e-43,41;UBERON:0003528,7.03e-39,34;UBERON:0002020,7.03e-39,34;UBERON:0001893,1.92e-38,34;UBERON:0002791,7.55e-36,32;UBERON:0001869,1.79e-35,32;UBERON:0010371,3.51e-33,104;UBERON:0003056,2.06e-31,61;UBERON:0010314,2.28e-30,132;UBERON:0002619,4.37e-30,22;UBERON:0001950,5.67e-27,20;UBERON:0000956,8.46e-26,25;UBERON:0000203,8.46e-26,25;UBERON:0004121,2.69e-24,171;UBERON:0000924,2.69e-24,171;UBERON:0006601,2.69e-24,171;UBERON:0011216,9.69e-18,223;UBERON:0000025,1.13e-16,192;UBERON:0002420,7.97e-15,9;UBERON:0007245,7.97e-15,9;UBERON:0010009,7.97e-15,9;UBERON:0010011,7.97e-15,9;UBERON:0000454,7.97e-15,9;UBERON:0000125,8.81e-15,9;UBERON:0002308,8.81e-15,9;UBERON:0003076,1.03e-14,15;UBERON:0003057,1.03e-14,15;UBERON:0004111,2.37e-14,240;UBERON:0004732,8.44e-12,13;UBERON:0009663,9.05e-12,7;UBERON:0001871,2.39e-11,6;UBERON:0004733,3.20e-10,12;UBERON:0002028,3.20e-10,12;UBERON:0007277,3.20e-10,12;UBERON:0002298,3.88e-10,6;UBERON:0000200,8.22e-10,6;UBERON:0000483,4.63e-09,306;UBERON:0000349,7.32e-09,5;UBERON:0000119,8.28e-09,309;UBERON:0002021,1.39e-08,5;UBERON:0000369,4.74e-07,4;UBERON:0002435,4.74e-07,4;UBERON:0000204,4.74e-07,4;UBERON:0010082,4.74e-07,4 | |||
|phase1_expression=1.09007027562334,2.99740733447376,2.11431606143957,1.0007329835313,5.81049422755474,1.74467704820074,0,0.631719873426831,0.783556884599516,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0,0,0,0,0,0,0,0,0.200544447470142,0.434021741431704,0,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.334231370655521,0,0,0,0.25618263945135,0.260118695119756,0,0,0,0,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0,0.255973222308837,0,0,0,0,0,0,4.87613732627923,0,0,0,0,0.144846518960824,0,0,0,0,0,4.91171533116422,0,0,0,0,0.26591592103773,5.24679373471752,12.5838880371628,2.60020250930695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,1.81628913173918,1.15235184896,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0.989067717114227,0,0.718618141816238,0,0,0,0,0,0.600952235626387,0,0,0,0,0,0,0,0,0,0,0,0.276149695926898,1.13152239773168,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0.928735856063958,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0.190254152234598,0,0,0.246217006087397,0.234004265139238,0.891786973732369,0,0,0,0,0,0,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0.300343057843917,0,0,0.43596006883328,0,0.517086863031111,0,0,2.6593811658487,0,0,0,0,0.714889968290738,14.650783345569,0,0,0.355391948742546,0,2.41151501647669,3.48613383440118,0.899756920638513,0,0,0,0,0,0,0.723906533337896,1.02738161275192,0.537182889719687,0,0,1.50939302401662,0.128343036279748,0,0,0,0,0,0,0,0,0,0.500170521059677,0.542530047399471,0,0,0,0.117141414992713,0,6.82222512167955,0,0,0,0.0868836144680828,33.6777990835914,47.3537924858981,0.206768026122887,0.431428401637234,0.106727557803444,0,0,0,0.496215615637554,0.153461973288062,1.40330047216537,2.81906128362542,0,2.0911009748669,0,0,0,0,0,0.116210378459959,0,0,0,0.459257792658427,0.182091168006717,1.44236856455367,0,0,0,0,0,0,0,0,0,0.541892875087706,1.00337954770971,0,0,0,0,0,0.769350375349168,0.984043937099117,3.25378394664303,0.515205058238611,0,0,0,0,0,0,0.308097234229289,0.307007349452259,0,0,0,0.170453254832202,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,1.48863347743867,0.949138274156178,4.38449446024797,0.767693373934002,0.855877976067841,0,0,0.179872457583315,1.09814811894422,0.117812402345686,0,0,0,0.48763373908959,0,0,0.409499734223957,0.424216295861138,0,0,0,0,0.578775534266688,1.31178950409327,0,0,0,0,0,0,0.354761064070598,0,0.987884678879706,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0.95497793895076,0.296964680832639,0,18.8888053075597,5.76744607283102,0,0,0,1.59398390600856,4.97311047956066,0,0,0,0,0,0,0,1.08507746200627,0,0,6.78532922266653,9.92618650331809,1.99613798001194,0,0,0,0,0,0,0,0,0,17.7148277162768,4.46206822914009,7.62908681585416,3.64911557773041,9.16197618755997,36.4179759275594,0,0,10.0035336054936,6.60863923912607,0,0.179515288819544,0.217294743844016,3.82801391678303,0.274792780205587,4.79731298416771,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,5.59429403739619,0.802577647298789,21.3180645610059,0,0,0,2.36750641709634,1.20990716048664,11.3246921803281,6.00272506470636,0,0,0,0,0,0,0,0,0.173559738335131,0.0979923974143777,0,13.1045001181523,0,0,0,0,0.775912131907355,0,8.13530666809917,0,0,2.15256706249988,0,0,3.62870091056899,0.999048047910651,0,0,0,0,0.248505071130865,0,0,0.104602846312333,0,0,25.8180724145209,6.57145818681567,0,0,0,26.5318281208642,5.49985017628041,5.0251111720377,4.79229601197579,23.1782065993748,11.8280872444192,0.739018197353989,0,0,0,0,0,0,0,21.4712016248512,5.85674646279775,0,0,0,0,0,1.70098758642469,0,0.630445658393585,0,0,0,0,38.5935476241618,21.1869430516938,0.25426853765475,0,0,0,0,0,0,0,0.146552233678082,0,10.342636508924,7.14056049410526,0,0,1.17466153824464,0,3.31391244277756,5.95399226174341,0,0,0,0,0,0,0,0,14.1770908794718,16.2294932319611,4.88244629755349,16.055457479322,7.09945929835855,3.97416978824854,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0.251567901752575,1.77962244319307,0.228840068396924,0,0,0.147855149989634,0,4.94783423379965,0.155262956876259,0.414706207840855,0.53168342911599,0,2.40412174395549,3.42724690951916,0.406870733204662,0,0,0.928067519756987,1.19428766609585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.28601152070365,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371807292777007,0,0,0,0,0,0,1.99110597799025,17.0035891590702,4.94864963077169,17.8451236889457,2.26864526599546,3.52701987567511,15.8246132719214,41.4031318751548,0,0,0,0.115525666150338,0,0,0.198916222116275,0.902523940191087,0,0,0.523813388962845,0,0,2.70150338473579,15.6215619722769,4.75379631952723,2.91712726891971,0.546974809018219,0,6.94695649745012,0,0,9.64263304580916,0.672567444437648,13.3532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| ||
|short_description=p4@PTGDS | |short_description=p4@PTGDS | ||
}} | }} |
Latest revision as of 14:39, 16 September 2015
Short description: | p4@PTGDS |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PTGDS_5end |
Coexpression cluster: | C485_Pericytes_retina_cerebral_Dendritic_testis_corpus_spinal |
Association with transcript: | 28bp_to_ENST00000462514_5end |
EntrezGene: | PTGDS |
HGNC: | 9592 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data