FFCP PHASE1:Hg19::chr16:89724188..89724261,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=124045 | |EntrezGene=124045 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26463 | |HGNC=26463 | ||
|TSSclassifier=strong | |||
|UniProt=B4DZN8,Q96N06 | |UniProt=B4DZN8,Q96N06 | ||
|association_with_transcript=0bp_to_ENST00000457689,NM_153025,uc002fnw.1,uc002fnx.3,uc010vpk.1_5end | |association_with_transcript=0bp_to_ENST00000457689,NM_153025,uc002fnw.1,uc002fnx.3,uc010vpk.1_5end | ||
|cluster_id=chr16:89724188..89724261,+ | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_2_at_C16orf55_5end | |description=CAGE_peak_2_at_C16orf55_5end | ||
|id=chr16:89724188..89724261,+ | |id=chr16:89724188..89724261,+ | ||
|ontology_enrichment_celltype=CL:0000066!2.09e-13!254;CL:0002319!1.03e-08!25;CL:0002321!3.03e-08!248;CL:0000133!6.98e-08!59;CL:0000220!7.15e-08!246;CL:0000221!4.34e-07!71 | |ontology_enrichment_celltype=CL:0000066!2.09e-13!254;CL:0002319!1.03e-08!25;CL:0002321!3.03e-08!248;CL:0000133!6.98e-08!59;CL:0000220!7.15e-08!246;CL:0000221!4.34e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0002319;4.32e-09;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.32e-13,253;CL:0002319,8.90e-09,25;CL:0002321,4.91e-08,250;CL:0000133,7.54e-08,59;CL:0000221,6.19e-07,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!2.03e-11!143;DOID:305!7.44e-11!106;DOID:14566!7.67e-09!239;DOID:162!1.29e-08!235 | |ontology_enrichment_disease=DOID:0050687!2.03e-11!143;DOID:305!7.44e-11!106;DOID:14566!7.67e-09!239;DOID:162!1.29e-08!235 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,3.29e-11,143;DOID:305,7.86e-11,106;DOID:14566,1.19e-08,239;DOID:162,2.00e-08,235 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.14e-29!94;UBERON:0001016!1.14e-29!94;UBERON:0005743!8.25e-29!86;UBERON:0001017!2.11e-27!82;UBERON:0003075!3.24e-24!86;UBERON:0007284!3.24e-24!86;UBERON:0002346!3.55e-24!90;UBERON:0000955!2.21e-22!69;UBERON:0006238!2.21e-22!69;UBERON:0000119!8.54e-22!312;UBERON:0001049!1.23e-21!57;UBERON:0005068!1.23e-21!57;UBERON:0006241!1.23e-21!57;UBERON:0007135!1.23e-21!57;UBERON:0000483!5.21e-21!309;UBERON:0000924!5.46e-21!173;UBERON:0006601!5.46e-21!173;UBERON:0004121!1.00e-20!169;UBERON:0002616!4.04e-20!59;UBERON:0003056!9.16e-20!61;UBERON:0000475!5.70e-19!365;UBERON:0000033!7.29e-18!123;UBERON:0000481!3.62e-17!347;UBERON:0000153!4.29e-17!129;UBERON:0007811!4.29e-17!129;UBERON:0002780!8.52e-17!41;UBERON:0001890!8.52e-17!41;UBERON:0006240!8.52e-17!41;UBERON:0002020!4.46e-16!34;UBERON:0003528!4.46e-16!34;UBERON:0001893!5.17e-16!34;UBERON:0001869!6.27e-16!32;UBERON:0003080!1.43e-15!42;UBERON:0002791!1.68e-15!33;UBERON:0000064!1.75e-15!219;UBERON:0000025!1.18e-13!194;UBERON:0000956!2.09e-13!25;UBERON:0000203!2.09e-13!25;UBERON:0002619!5.09e-12!22;UBERON:0000477!7.39e-12!286;UBERON:0001950!6.23e-11!20;UBERON:0004111!9.72e-11!241;UBERON:0003076!2.46e-07!15;UBERON:0003057!2.46e-07!15;UBERON:0000063!4.87e-07!97;UBERON:0004732!5.50e-07!13 | |ontology_enrichment_uberon=UBERON:0000073!1.14e-29!94;UBERON:0001016!1.14e-29!94;UBERON:0005743!8.25e-29!86;UBERON:0001017!2.11e-27!82;UBERON:0003075!3.24e-24!86;UBERON:0007284!3.24e-24!86;UBERON:0002346!3.55e-24!90;UBERON:0000955!2.21e-22!69;UBERON:0006238!2.21e-22!69;UBERON:0000119!8.54e-22!312;UBERON:0001049!1.23e-21!57;UBERON:0005068!1.23e-21!57;UBERON:0006241!1.23e-21!57;UBERON:0007135!1.23e-21!57;UBERON:0000483!5.21e-21!309;UBERON:0000924!5.46e-21!173;UBERON:0006601!5.46e-21!173;UBERON:0004121!1.00e-20!169;UBERON:0002616!4.04e-20!59;UBERON:0003056!9.16e-20!61;UBERON:0000475!5.70e-19!365;UBERON:0000033!7.29e-18!123;UBERON:0000481!3.62e-17!347;UBERON:0000153!4.29e-17!129;UBERON:0007811!4.29e-17!129;UBERON:0002780!8.52e-17!41;UBERON:0001890!8.52e-17!41;UBERON:0006240!8.52e-17!41;UBERON:0002020!4.46e-16!34;UBERON:0003528!4.46e-16!34;UBERON:0001893!5.17e-16!34;UBERON:0001869!6.27e-16!32;UBERON:0003080!1.43e-15!42;UBERON:0002791!1.68e-15!33;UBERON:0000064!1.75e-15!219;UBERON:0000025!1.18e-13!194;UBERON:0000956!2.09e-13!25;UBERON:0000203!2.09e-13!25;UBERON:0002619!5.09e-12!22;UBERON:0000477!7.39e-12!286;UBERON:0001950!6.23e-11!20;UBERON:0004111!9.72e-11!241;UBERON:0003076!2.46e-07!15;UBERON:0003057!2.46e-07!15;UBERON:0000063!4.87e-07!97;UBERON:0004732!5.50e-07!13 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.43e-14;32!UBERON:0001893;3.46e-14;34!UBERON:0003528;3.46e-14;34!UBERON:0002020;3.46e-14;34!UBERON:0002791;7.75e-14;32!UBERON:0000956;1.27e-13;25!UBERON:0000203;1.27e-13;25!UBERON:0000073;5.01e-13;53!UBERON:0002616;5.01e-13;53!UBERON:0002780;1.91e-12;41!UBERON:0001890;1.91e-12;41!UBERON:0002619;3.67e-12;22!UBERON:0001950;4.60e-11;20!UBERON:0000955;7.96e-11;68!UBERON:0001017;4.31e-10;75!UBERON:0001016;5.12e-10;83!UBERON:0004732;4.10e-07;13!UBERON:0004733;7.37e-07;12!UBERON:0002028;7.37e-07;12 | |||
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| ||
|short_description=p2@C16orf55 | |short_description=p2@C16orf55 | ||
}} | }} |
Latest revision as of 12:12, 18 September 2015
Short description: | p2@C16orf55 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_C16orf55_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000457689, NM_153025, uc002fnw.1, uc002fnx.3, uc010vpk.1_5end |
EntrezGene: | C16orf55 |
HGNC: | 26463 |
UniProt: | B4DZN8Q96N06 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.32e-13 | 253 |
neural cell | 8.90e-09 | 25 |
embryonic cell | 4.91e-08 | 250 |
neurectodermal cell | 7.54e-08 | 59 |
ectodermal cell | 6.19e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 3.29e-11 | 143 |
carcinoma | 7.86e-11 | 106 |
disease of cellular proliferation | 1.19e-08 | 239 |
cancer | 2.00e-08 | 235 |