FFCP PHASE1:Hg19::chr17:38256858..38256866,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9572 | |EntrezGene=9572 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7962 | |HGNC=7962 | ||
|TSSclassifier=strong | |||
|UniProt=F1D8S3,P20393 | |UniProt=F1D8S3,P20393 | ||
|association_with_transcript=106bp_to_NM_021724,uc002htz.1,uc010cwq.1_5end | |association_with_transcript=106bp_to_NM_021724,uc002htz.1,uc010cwq.1_5end | ||
|cluster_id=chr17:38256858..38256866,- | |||
|coexpression_cluster_id=C2403 | |coexpression_cluster_id=C2403 | ||
|description=CAGE_peak_6_at_NR1D1_5end | |description=CAGE_peak_6_at_NR1D1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.98e-11;82 | |ontology_enrichment_development_v019=UBERON:0006601;3.98e-11;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.74e-33!115;UBERON:0001049!5.03e-20!57;UBERON:0005068!5.03e-20!57;UBERON:0006241!5.03e-20!57;UBERON:0007135!5.03e-20!57;UBERON:0003080!1.26e-17!42;UBERON:0002780!4.14e-17!41;UBERON:0001890!4.14e-17!41;UBERON:0006240!4.14e-17!41;UBERON:0003075!4.10e-16!86;UBERON:0007284!4.10e-16!86;UBERON:0002346!1.07e-15!90;UBERON:0000955!1.10e-15!69;UBERON:0006238!1.10e-15!69;UBERON:0002616!4.00e-15!59;UBERON:0001893!1.25e-14!34;UBERON:0000153!2.22e-14!129;UBERON:0007811!2.22e-14!129;UBERON:0000033!4.61e-14!123;UBERON:0002791!5.13e-14!33;UBERON:0002020!6.86e-14!34;UBERON:0003528!6.86e-14!34;UBERON:0001869!8.36e-14!32;UBERON:0001017!2.48e-13!82;UBERON:0005743!3.16e-13!86;UBERON:0003056!1.21e-12!61;UBERON:0000073!2.14e-12!94;UBERON:0001016!2.14e-12!94;UBERON:0004121!5.67e-12!169;UBERON:0002619!6.38e-12!22;UBERON:0000924!6.86e-12!173;UBERON:0006601!6.86e-12!173;UBERON:0001950!9.59e-11!20;UBERON:0000956!5.90e-10!25;UBERON:0000203!5.90e-10!25;UBERON:0000062!7.93e-09!511;UBERON:0004111!3.45e-08!241;UBERON:0000475!1.38e-07!365 | |ontology_enrichment_uberon=UBERON:0007023!1.74e-33!115;UBERON:0001049!5.03e-20!57;UBERON:0005068!5.03e-20!57;UBERON:0006241!5.03e-20!57;UBERON:0007135!5.03e-20!57;UBERON:0003080!1.26e-17!42;UBERON:0002780!4.14e-17!41;UBERON:0001890!4.14e-17!41;UBERON:0006240!4.14e-17!41;UBERON:0003075!4.10e-16!86;UBERON:0007284!4.10e-16!86;UBERON:0002346!1.07e-15!90;UBERON:0000955!1.10e-15!69;UBERON:0006238!1.10e-15!69;UBERON:0002616!4.00e-15!59;UBERON:0001893!1.25e-14!34;UBERON:0000153!2.22e-14!129;UBERON:0007811!2.22e-14!129;UBERON:0000033!4.61e-14!123;UBERON:0002791!5.13e-14!33;UBERON:0002020!6.86e-14!34;UBERON:0003528!6.86e-14!34;UBERON:0001869!8.36e-14!32;UBERON:0001017!2.48e-13!82;UBERON:0005743!3.16e-13!86;UBERON:0003056!1.21e-12!61;UBERON:0000073!2.14e-12!94;UBERON:0001016!2.14e-12!94;UBERON:0004121!5.67e-12!169;UBERON:0002619!6.38e-12!22;UBERON:0000924!6.86e-12!173;UBERON:0006601!6.86e-12!173;UBERON:0001950!9.59e-11!20;UBERON:0000956!5.90e-10!25;UBERON:0000203!5.90e-10!25;UBERON:0000062!7.93e-09!511;UBERON:0004111!3.45e-08!241;UBERON:0000475!1.38e-07!365 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.15e-24;41!UBERON:0001890;2.15e-24;41!UBERON:0001893;2.21e-24;34!UBERON:0001869;1.20e-23;32!UBERON:0002791;2.67e-23;32!UBERON:0002619;4.00e-22;22!UBERON:0003528;4.83e-22;34!UBERON:0002020;4.83e-22;34!UBERON:0000073;3.00e-20;53!UBERON:0002616;3.00e-20;53!UBERON:0001950;8.29e-20;20!UBERON:0000956;9.99e-19;25!UBERON:0000203;9.99e-19;25!UBERON:0007023;2.66e-14;114!UBERON:0000955;2.22e-13;68!UBERON:0001017;3.63e-12;75!UBERON:0002420;4.57e-11;9!UBERON:0007245;4.57e-11;9!UBERON:0010009;4.57e-11;9!UBERON:0010011;4.57e-11;9!UBERON:0000454;4.57e-11;9!UBERON:0000200;1.34e-09;6!UBERON:0001016;2.00e-09;83!UBERON:0009663;7.18e-09;7!UBERON:0000125;2.39e-08;9!UBERON:0002308;2.39e-08;9!UBERON:0001894;1.61e-07;7!UBERON:0000349;1.93e-07;5!UBERON:0001871;3.24e-07;6!UBERON:0002784;8.60e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0002780;2.15e-24;41!UBERON:0001890;2.15e-24;41!UBERON:0001893;2.21e-24;34!UBERON:0001869;1.20e-23;32!UBERON:0002791;2.67e-23;32!UBERON:0002619;4.00e-22;22!UBERON:0003528;4.83e-22;34!UBERON:0002020;4.83e-22;34!UBERON:0000073;3.00e-20;53!UBERON:0002616;3.00e-20;53!UBERON:0001950;8.29e-20;20!UBERON:0000956;9.99e-19;25!UBERON:0000203;9.99e-19;25!UBERON:0007023;2.66e-14;114!UBERON:0000955;2.22e-13;68!UBERON:0001017;3.63e-12;75!UBERON:0002420;4.57e-11;9!UBERON:0007245;4.57e-11;9!UBERON:0010009;4.57e-11;9!UBERON:0010011;4.57e-11;9!UBERON:0000454;4.57e-11;9!UBERON:0000200;1.34e-09;6!UBERON:0001016;2.00e-09;83!UBERON:0009663;7.18e-09;7!UBERON:0000125;2.39e-08;9!UBERON:0002308;2.39e-08;9!UBERON:0001894;1.61e-07;7!UBERON:0000349;1.93e-07;5!UBERON:0001871;3.24e-07;6!UBERON:0002784;8.60e-07;4 | ||
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| ||
|short_description=p6@NR1D1 | |short_description=p6@NR1D1 | ||
}} | }} |
Latest revision as of 00:03, 20 September 2015
Short description: | p6@NR1D1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_NR1D1_5end |
Coexpression cluster: | C2403_skeletal_cervix_eye_cerebellum_dura_testicular_mature |
Association with transcript: | 106bp_to_NM_021724, uc002htz.1, uc010cwq.1_5end |
EntrezGene: | NR1D1 |
HGNC: | 7962 |
UniProt: | F1D8S3P20393 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data