FFCP PHASE1:Hg19::chr3:155588300..155588369,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8833 | |EntrezGene=8833 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4378 | |HGNC=4378 | ||
|TSSclassifier=strong | |||
|UniProt=P49915,A8K639 | |UniProt=P49915,A8K639 | ||
|association_with_transcript=0bp_to_ENST00000496455,NM_003875,uc003faq.2,uc011bom.1_5end | |association_with_transcript=0bp_to_ENST00000496455,NM_003875,uc003faq.2,uc011bom.1_5end | ||
|cluster_id=chr3:155588300..155588369,+ | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_2_at_GMPS_5end | |description=CAGE_peak_2_at_GMPS_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.64e-07;82 | |ontology_enrichment_development_v019=UBERON:0006601;1.64e-07;82 | ||
|ontology_enrichment_disease=DOID:162!6.83e-19!235;DOID:0050687!5.82e-18!143;DOID:14566!1.18e-17!239;DOID:305!2.49e-13!106;DOID:3095!1.99e-07!22;DOID:2994!1.99e-07!22 | |ontology_enrichment_disease=DOID:162!6.83e-19!235;DOID:0050687!5.82e-18!143;DOID:14566!1.18e-17!239;DOID:305!2.49e-13!106;DOID:3095!1.99e-07!22;DOID:2994!1.99e-07!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;4.30e-07;22!DOID:2994;4.30e-07;22 | |ontology_enrichment_disease_v019=DOID:3095;4.30e-07;22!DOID:2994;4.30e-07;22 | ||
|ontology_enrichment_disease_v019_2=DOID:162,6.91e-19,235;DOID:0050687,5.75e-18,143;DOID:14566,1.36e-17,239;DOID:305,2.55e-13,106;DOID:3095,1.89e-07,22;DOID:2994,1.89e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000073!8.83e-21!94;UBERON:0001016!8.83e-21!94;UBERON:0001017!2.01e-20!82;UBERON:0005743!3.27e-20!86;UBERON:0000955!1.29e-15!69;UBERON:0006238!1.29e-15!69;UBERON:0001049!1.85e-15!57;UBERON:0005068!1.85e-15!57;UBERON:0006241!1.85e-15!57;UBERON:0007135!1.85e-15!57;UBERON:0000924!4.45e-15!173;UBERON:0006601!4.45e-15!173;UBERON:0002346!1.36e-14!90;UBERON:0004121!5.16e-14!169;UBERON:0003075!2.05e-13!86;UBERON:0007284!2.05e-13!86;UBERON:0002780!2.24e-13!41;UBERON:0001890!2.24e-13!41;UBERON:0006240!2.24e-13!41;UBERON:0003080!4.76e-13!42;UBERON:0001869!7.29e-13!32;UBERON:0002020!8.57e-13!34;UBERON:0003528!8.57e-13!34;UBERON:0002616!9.83e-13!59;UBERON:0001893!1.43e-12!34;UBERON:0002791!4.07e-12!33;UBERON:0007023!2.04e-10!115;UBERON:0002619!9.00e-10!22;UBERON:0000153!1.36e-09!129;UBERON:0007811!1.36e-09!129;UBERON:0000033!1.40e-09!123;UBERON:0000956!1.43e-09!25;UBERON:0000203!1.43e-09!25;UBERON:0001950!2.23e-09!20;UBERON:0003056!1.24e-08!61;UBERON:0000064!4.33e-08!219 | |ontology_enrichment_uberon=UBERON:0000073!8.83e-21!94;UBERON:0001016!8.83e-21!94;UBERON:0001017!2.01e-20!82;UBERON:0005743!3.27e-20!86;UBERON:0000955!1.29e-15!69;UBERON:0006238!1.29e-15!69;UBERON:0001049!1.85e-15!57;UBERON:0005068!1.85e-15!57;UBERON:0006241!1.85e-15!57;UBERON:0007135!1.85e-15!57;UBERON:0000924!4.45e-15!173;UBERON:0006601!4.45e-15!173;UBERON:0002346!1.36e-14!90;UBERON:0004121!5.16e-14!169;UBERON:0003075!2.05e-13!86;UBERON:0007284!2.05e-13!86;UBERON:0002780!2.24e-13!41;UBERON:0001890!2.24e-13!41;UBERON:0006240!2.24e-13!41;UBERON:0003080!4.76e-13!42;UBERON:0001869!7.29e-13!32;UBERON:0002020!8.57e-13!34;UBERON:0003528!8.57e-13!34;UBERON:0002616!9.83e-13!59;UBERON:0001893!1.43e-12!34;UBERON:0002791!4.07e-12!33;UBERON:0007023!2.04e-10!115;UBERON:0002619!9.00e-10!22;UBERON:0000153!1.36e-09!129;UBERON:0007811!1.36e-09!129;UBERON:0000033!1.40e-09!123;UBERON:0000956!1.43e-09!25;UBERON:0000203!1.43e-09!25;UBERON:0001950!2.23e-09!20;UBERON:0003056!1.24e-08!61;UBERON:0000064!4.33e-08!219 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;7.35e-12;32!UBERON:0003528;2.02e-11;34!UBERON:0002020;2.02e-11;34!UBERON:0002791;2.80e-11;32!UBERON:0001893;2.96e-11;34!UBERON:0002780;2.97e-10;41!UBERON:0001890;2.97e-10;41!UBERON:0002619;6.73e-10;22!UBERON:0001950;1.32e-09;20!UBERON:0000956;1.82e-09;25!UBERON:0000203;1.82e-09;25!UBERON:0000073;3.10e-09;53!UBERON:0002616;3.10e-09;53!UBERON:0001016;1.46e-08;83!UBERON:0000955;5.93e-08;68!UBERON:0001017;1.00e-07;75!UBERON:0000922;8.43e-07;49 | |ontology_enrichment_uberon_v019=UBERON:0001869;7.35e-12;32!UBERON:0003528;2.02e-11;34!UBERON:0002020;2.02e-11;34!UBERON:0002791;2.80e-11;32!UBERON:0001893;2.96e-11;34!UBERON:0002780;2.97e-10;41!UBERON:0001890;2.97e-10;41!UBERON:0002619;6.73e-10;22!UBERON:0001950;1.32e-09;20!UBERON:0000956;1.82e-09;25!UBERON:0000203;1.82e-09;25!UBERON:0000073;3.10e-09;53!UBERON:0002616;3.10e-09;53!UBERON:0001016;1.46e-08;83!UBERON:0000955;5.93e-08;68!UBERON:0001017;1.00e-07;75!UBERON:0000922;8.43e-07;49 | ||
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| ||
|short_description=p2@GMPS | |short_description=p2@GMPS | ||
}} | }} |
Latest revision as of 05:37, 16 September 2015
Short description: | p2@GMPS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GMPS_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000496455, NM_003875, uc003faq.2, uc011bom.1_5end |
EntrezGene: | GMPS |
HGNC: | 4378 |
UniProt: | P49915A8K639 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cancer | 6.91e-19 | 235 |
cell type cancer | 5.75e-18 | 143 |
disease of cellular proliferation | 1.36e-17 | 239 |
carcinoma | 2.55e-13 | 106 |
germ cell and embryonal cancer | 1.89e-07 | 22 |
germ cell cancer | 1.89e-07 | 22 |