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FFCP PHASE1:Mm9::chr11:74403567..74403651,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=380711
|EntrezGene=380711
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q5SUE5
|UniProt=Q5SUE5
|association_with_transcript=0bp_to_ENSMUST00000145524_5end
|association_with_transcript=0bp_to_ENSMUST00000145524_5end
|cluster_id=chr11:74403567..74403651,-
|description=CAGE_peak_1_at_Rap1gap2_5end
|description=CAGE_peak_1_at_Rap1gap2_5end
|id=chr11:74403567..74403651,-
|id=chr11:74403567..74403651,-
|ontology_enrichment_celltype=CL:0000117!5.97e-17!23;CL:0000337!5.97e-17!23;CL:0000540!8.99e-11!33;CL:0000047!8.99e-11!33;CL:0000031!8.99e-11!33;CL:0000404!8.99e-11!33;CL:0000393!1.07e-07!39;CL:0000211!1.07e-07!39;CL:0000221!2.14e-07!44;CL:0000133!2.14e-07!44;CL:0002319!2.88e-07!43
|ontology_enrichment_celltype=CL:0000117!5.97e-17!23;CL:0000337!5.97e-17!23;CL:0000540!8.99e-11!33;CL:0000047!8.99e-11!33;CL:0000031!8.99e-11!33;CL:0000404!8.99e-11!33;CL:0000393!1.07e-07!39;CL:0000211!1.07e-07!39;CL:0000221!2.14e-07!44;CL:0000133!2.14e-07!44;CL:0002319!2.88e-07!43
|ontology_enrichment_celltype_v019_2=CL:0000117,2.82e-26,23;CL:0000337,2.82e-26,23;CL:0000540,1.21e-17,33;CL:0000047,1.21e-17,33;CL:0000031,1.21e-17,33;CL:0000404,1.21e-17,33;CL:0000393,7.64e-14,39;CL:0000211,7.64e-14,39;CL:0002319,6.43e-12,43;CL:0000221,1.71e-11,44;CL:0000133,1.71e-11,44;CL:0002609,9.10e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!3.05e-27!52;UBERON:0005068!3.05e-27!52;UBERON:0006241!3.05e-27!52;UBERON:0007135!3.05e-27!52;UBERON:0000955!3.70e-26!50;UBERON:0006238!3.70e-26!50;UBERON:0002616!2.27e-25!49;UBERON:0000033!2.28e-25!63;UBERON:0000073!8.83e-25!75;UBERON:0001016!8.83e-25!75;UBERON:0001017!2.64e-24!73;UBERON:0005743!2.64e-24!73;UBERON:0002346!3.07e-24!71;UBERON:0003075!3.07e-24!71;UBERON:0007284!3.07e-24!71;UBERON:0002020!4.69e-23!34;UBERON:0004121!8.23e-23!102;UBERON:0000924!8.23e-23!102;UBERON:0006601!8.23e-23!102;UBERON:0003056!1.38e-22!49;UBERON:0003080!2.78e-21!40;UBERON:0002780!1.92e-20!39;UBERON:0001890!1.92e-20!39;UBERON:0006240!1.92e-20!39;UBERON:0002791!1.61e-19!29;UBERON:0003528!1.61e-19!29;UBERON:0001893!1.61e-19!29;UBERON:0007811!3.74e-14!86;UBERON:0000956!3.83e-13!21;UBERON:0001869!3.83e-13!21;UBERON:0000203!3.83e-13!21;UBERON:0000153!2.57e-11!94;UBERON:0002619!1.11e-10!17;UBERON:0002021!6.18e-10!10;UBERON:0000411!6.18e-10!10;UBERON:0001950!6.18e-10!10;UBERON:0002420!1.17e-07!8;UBERON:0007245!1.17e-07!8;UBERON:0010009!1.17e-07!8;UBERON:0010011!1.17e-07!8;UBERON:0000454!1.17e-07!8
|ontology_enrichment_uberon=UBERON:0001049!3.05e-27!52;UBERON:0005068!3.05e-27!52;UBERON:0006241!3.05e-27!52;UBERON:0007135!3.05e-27!52;UBERON:0000955!3.70e-26!50;UBERON:0006238!3.70e-26!50;UBERON:0002616!2.27e-25!49;UBERON:0000033!2.28e-25!63;UBERON:0000073!8.83e-25!75;UBERON:0001016!8.83e-25!75;UBERON:0001017!2.64e-24!73;UBERON:0005743!2.64e-24!73;UBERON:0002346!3.07e-24!71;UBERON:0003075!3.07e-24!71;UBERON:0007284!3.07e-24!71;UBERON:0002020!4.69e-23!34;UBERON:0004121!8.23e-23!102;UBERON:0000924!8.23e-23!102;UBERON:0006601!8.23e-23!102;UBERON:0003056!1.38e-22!49;UBERON:0003080!2.78e-21!40;UBERON:0002780!1.92e-20!39;UBERON:0001890!1.92e-20!39;UBERON:0006240!1.92e-20!39;UBERON:0002791!1.61e-19!29;UBERON:0003528!1.61e-19!29;UBERON:0001893!1.61e-19!29;UBERON:0007811!3.74e-14!86;UBERON:0000956!3.83e-13!21;UBERON:0001869!3.83e-13!21;UBERON:0000203!3.83e-13!21;UBERON:0000153!2.57e-11!94;UBERON:0002619!1.11e-10!17;UBERON:0002021!6.18e-10!10;UBERON:0000411!6.18e-10!10;UBERON:0001950!6.18e-10!10;UBERON:0002420!1.17e-07!8;UBERON:0007245!1.17e-07!8;UBERON:0010009!1.17e-07!8;UBERON:0010011!1.17e-07!8;UBERON:0000454!1.17e-07!8
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.43e-39,54;UBERON:0002020,5.29e-37,34;UBERON:0001049,1.84e-36,52;UBERON:0005068,1.84e-36,52;UBERON:0006241,1.84e-36,52;UBERON:0007135,1.84e-36,52;UBERON:0001017,1.92e-35,73;UBERON:0001016,4.06e-34,75;UBERON:0003528,2.76e-31,29;UBERON:0002791,2.76e-31,29;UBERON:0001893,2.76e-31,29;UBERON:0000955,8.60e-31,47;UBERON:0006238,8.60e-31,47;UBERON:0002616,1.30e-29,46;UBERON:0002346,2.79e-27,64;UBERON:0003075,2.79e-27,64;UBERON:0007284,2.79e-27,64;UBERON:0003080,2.43e-26,40;UBERON:0002780,4.49e-25,39;UBERON:0001890,4.49e-25,39;UBERON:0006240,4.49e-25,39;UBERON:0004121,5.96e-24,95;UBERON:0000924,5.96e-24,95;UBERON:0006601,5.96e-24,95;UBERON:0010371,2.12e-22,73;UBERON:0000956,5.76e-21,21;UBERON:0001869,5.76e-21,21;UBERON:0000203,5.76e-21,21;UBERON:0003056,9.69e-20,49;UBERON:0002619,5.36e-17,17;UBERON:0010314,2.68e-15,92;UBERON:0002021,5.35e-15,10;UBERON:0000411,5.35e-15,10;UBERON:0001950,5.35e-15,10;UBERON:0002420,2.39e-11,8;UBERON:0007245,2.39e-11,8;UBERON:0010009,2.39e-11,8;UBERON:0010011,2.39e-11,8;UBERON:0000454,2.39e-11,8;UBERON:0003076,3.42e-10,12;UBERON:0003057,3.42e-10,12;UBERON:0000025,3.87e-10,114;UBERON:0004111,9.34e-09,122;UBERON:0002240,9.05e-08,6;UBERON:0005174,9.05e-08,6;UBERON:0001137,9.05e-08,6;UBERON:0000369,2.94e-07,5;UBERON:0002435,2.94e-07,5;UBERON:0000204,2.94e-07,5;UBERON:0010082,2.94e-07,5;UBERON:0002950,6.04e-07,4;UBERON:0001891,6.04e-07,4;UBERON:0009616,6.04e-07,4;UBERON:0010286,6.04e-07,4
|phase1_expression=0,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.656861476496,0,0,0,0.22940928106717,0,0,0.215471232685889,0.190023419456374,0,0,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.08107613008592,4.7609188134483,3.80298842103708,0,0,0,0,0,0,0,1.34796496001021,2.56511282830212,1.26194976810829,6.85562362569129,7.73039893330647,5.38959516545798,5.84657373211242,2.75765635983006,12.1127469099328,20.6853487698004,17.9719643909805,8.17694983927202,13.5401712531566,6.77187381723788,20.9387249251036,22.5105044012672,18.0301932376636,6.48182888042069,7.54569908235246,8.01517617048792,0.075726193333184,0.529000920747499,0,0,0,0,0,0,0.702222100658759,0,0,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0.150722640552623,0.352766121407114,0,0,0.144599356919912,0,0,0,0,0,14.9318206475889,17.8029700791437,0,0,0,0,16.3271796951257,14.640019290196,17.7172636479139,27.2904182701874,25.3158302757027,13.714010940931,18.6577452527921,0,0,0,0.210441855886474,0,0.459804208866946,0.360124259610698,0.60281927134286,0.680364991513279,0.640568601424249,0.468508622798644,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162137619091711,0,0,0,13.4585567081041,3.80747065803352,0.330418782983798,0,0,0,0.128867461322093,0,0,0,0.474529061544512,0,0.251335208800269,0,0.19496408711912,0,0,0.597423819763102,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.1284519189257,16.2924244363162,0,0,0.315508219416257,0,0,0,0,0,0,0,1.18586333383957,11.8888887076069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0.18006109403131,0.258717367565509,0,0,0.535106452806212,0.658196082408484,0.304464949114599,0,0,0.661585194164886,0.32977250588296,0,0.180938774784468,0.358117032009409,0.492422699235184,0,10.198391610578,0,0.206386867963223,0,0,0.136694227721025,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0,0.247960367176008,0,0.129614973291793,0,0,0,0,0,0,0,0,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0,0,0,0,14.6835479080437,11.0478056761722,15.4681788628637,13.9201077698387,23.9778881919725,29.4603619981983,24.9758325085768,27.9199145999017,21.2976932222576,34.6899408873719,0.207574695168353,0,1.19513524027894,1.21553358534147,1.04806581313991,0.551530525350042,1.77797382241292,0.412070114477788,1.92551525755089,0.505394423527595,1.52087579934144,1.32038438970253,1.03005658216871,0.960377286073039,1.14870937911227,1.42888107384922,0.811190281613988,0.964546102318525,1.23625770240992,0.883193520806384,0,0.887379030796687,0.953744759789284,1.0174249164263,0.752875043322645,1.35383372626682,1.09756783723664,1.05227884575137,1.49384525230448,1.12228454331548,1.30498519936592,1.0835493061312,2.04615521584845,0.929621047115796,0.964533054905707,3.49734809113124,0.467863216890817,0.859484216193193,0.765153328275374,0.220591419119515,0
|phase1_expression=0,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.656861476496,0,0,0,0.22940928106717,0,0,0.215471232685889,0.190023419456374,0,0,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.08107613008592,4.7609188134483,3.80298842103708,0,0,0,0,0,0,0,1.34796496001021,2.56511282830212,1.26194976810829,6.85562362569129,7.73039893330647,5.38959516545798,5.84657373211242,2.75765635983006,12.1127469099328,20.6853487698004,17.9719643909805,8.17694983927202,13.5401712531566,6.77187381723788,20.9387249251036,22.5105044012672,18.0301932376636,6.48182888042069,7.54569908235246,8.01517617048792,0.075726193333184,0.529000920747499,0,0,0,0,0,0,0.702222100658759,0,0,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0.150722640552623,0.352766121407114,0,0,0.144599356919912,0,0,0,0,0,14.9318206475889,17.8029700791437,0,0,0,0,16.3271796951257,14.640019290196,17.7172636479139,27.2904182701874,25.3158302757027,13.714010940931,18.6577452527921,0,0,0,0.210441855886474,0,0.459804208866946,0.360124259610698,0.60281927134286,0.680364991513279,0.640568601424249,0.468508622798644,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162137619091711,0,0,0,13.4585567081041,3.80747065803352,0.330418782983798,0,0,0,0.128867461322093,0,0,0,0.474529061544512,0,0.251335208800269,0,0.19496408711912,0,0,0.597423819763102,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.1284519189257,16.2924244363162,0,0,0.315508219416257,0,0,0,0,0,0,0,1.18586333383957,11.8888887076069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0.18006109403131,0.258717367565509,0,0,0.535106452806212,0.658196082408484,0.304464949114599,0,0,0.661585194164886,0.32977250588296,0,0.180938774784468,0.358117032009409,0.492422699235184,0,10.198391610578,0,0.206386867963223,0,0,0.136694227721025,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0,0.247960367176008,0,0.129614973291793,0,0,0,0,0,0,0,0,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0,0,0,0,14.6835479080437,11.0478056761722,15.4681788628637,13.9201077698387,23.9778881919725,29.4603619981983,24.9758325085768,27.9199145999017,21.2976932222576,34.6899408873719,0.207574695168353,0,1.19513524027894,1.21553358534147,1.04806581313991,0.551530525350042,1.77797382241292,0.412070114477788,1.92551525755089,0.505394423527595,1.52087579934144,1.32038438970253,1.03005658216871,0.960377286073039,1.14870937911227,1.42888107384922,0.811190281613988,0.964546102318525,1.23625770240992,0.883193520806384,0,0.887379030796687,0.953744759789284,1.0174249164263,0.752875043322645,1.35383372626682,1.09756783723664,1.05227884575137,1.49384525230448,1.12228454331548,1.30498519936592,1.0835493061312,2.04615521584845,0.929621047115796,0.964533054905707,3.49734809113124,0.467863216890817,0.859484216193193,0.765153328275374,0.220591419119515,0
|short_description=p1@Rap1gap2
|short_description=p1@Rap1gap2
}}
}}

Latest revision as of 15:51, 25 September 2015

Short description:p1@Rap1gap2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rap1gap2_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000145524_5end
EntrezGene:Rap1gap2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rap1gap2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.66
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C37.08
Mouse Granule cells, donor2.CNhs12357.11731-123E34.76
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.35
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.57
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.73
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.39
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.85
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D312.11
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F320.69
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D717.97
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D48.18
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F413.54
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.77
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E420.94
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E522.51
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I618.03
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.48
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.55
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E18.02
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B214.93
cerebellum, neonate N30.CNhs11135.1395-42I217.80
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A416.33
corpus striatum, adult.CNhs10487.19-21D814.64
corpus striatum, neonate N00.CNhs11226.630-43F117.72
cortex, adult.CNhs10473.12-14D527.29
cortex, neonate N30.CNhs11107.1392-42F225.32
diencephalon, adult.CNhs10482.20-12F213.71
diencephalon, neonate N30.CNhs11201.1388-42B218.66
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.68
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E813.46
hippocampus, neonate N00.CNhs11228.627-43G13.81
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C214.13
medulla oblongata, neonate N30.CNhs11200.1396-42A316.29
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I911.89
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C910.20
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A114.68
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A211.05
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A315.47
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D713.92
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A423.98
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A529.46
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A624.98
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A727.92
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A821.30
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A934.69
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.15
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.08
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I53.50
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.43e-3954
gray matter5.29e-3734
neural tube1.84e-3652
neural rod1.84e-3652
future spinal cord1.84e-3652
neural keel1.84e-3652
central nervous system1.92e-3573
nervous system4.06e-3475
brain grey matter2.76e-3129
regional part of telencephalon2.76e-3129
telencephalon2.76e-3129
brain8.60e-3147
future brain8.60e-3147
regional part of brain1.30e-2946
neurectoderm2.79e-2764
neural plate2.79e-2764
presumptive neural plate2.79e-2764
anterior neural tube2.43e-2640
regional part of forebrain4.49e-2539
forebrain4.49e-2539
future forebrain4.49e-2539
ectoderm-derived structure5.96e-2495
ectoderm5.96e-2495
presumptive ectoderm5.96e-2495
ecto-epithelium2.12e-2273
cerebral cortex5.76e-2121
cerebral hemisphere5.76e-2121
pallium5.76e-2121
pre-chordal neural plate9.69e-2049
regional part of cerebral cortex5.36e-1717
structure with developmental contribution from neural crest2.68e-1592
occipital lobe5.35e-1510
visual cortex5.35e-1510
neocortex5.35e-1510
basal ganglion2.39e-118
nuclear complex of neuraxis2.39e-118
aggregate regional part of brain2.39e-118
collection of basal ganglia2.39e-118
cerebral subcortex2.39e-118
posterior neural tube3.42e-1012
chordal neural plate3.42e-1012
tube3.87e-10114
anatomical conduit9.34e-09122
spinal cord9.05e-086
dorsal region element9.05e-086
dorsum9.05e-086
corpus striatum2.94e-075
striatum2.94e-075
ventral part of telencephalon2.94e-075
future corpus striatum2.94e-075
regional part of midbrain6.04e-074
midbrain6.04e-074
presumptive midbrain6.04e-074
midbrain neural tube6.04e-074
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