Personal tools

FFCP PHASE1:Mm9::chr1:161454007..161454026,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=21960
|EntrezGene=21960
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q8BYI9
|UniProt=Q8BYI9
|association_with_transcript=107bp_to_NM_022312,uc007dea.2_5end
|association_with_transcript=107bp_to_NM_022312,uc007dea.2_5end
|cluster_id=chr1:161454007..161454026,+
|description=CAGE_peak_2_at_Tnr_5end
|description=CAGE_peak_2_at_Tnr_5end
|id=chr1:161454007..161454026,+
|id=chr1:161454007..161454026,+
|ontology_enrichment_celltype=CL:0000540!2.75e-19!33;CL:0000047!2.75e-19!33;CL:0000031!2.75e-19!33;CL:0000404!2.75e-19!33;CL:0000221!1.94e-18!44;CL:0000133!1.94e-18!44;CL:0002319!2.61e-18!43;CL:0000393!3.52e-14!39;CL:0000211!3.52e-14!39;CL:0000117!4.41e-14!23;CL:0000337!4.41e-14!23;CL:0000055!1.49e-13!50
|ontology_enrichment_celltype=CL:0000540!2.75e-19!33;CL:0000047!2.75e-19!33;CL:0000031!2.75e-19!33;CL:0000404!2.75e-19!33;CL:0000221!1.94e-18!44;CL:0000133!1.94e-18!44;CL:0002319!2.61e-18!43;CL:0000393!3.52e-14!39;CL:0000211!3.52e-14!39;CL:0000117!4.41e-14!23;CL:0000337!4.41e-14!23;CL:0000055!1.49e-13!50
|ontology_enrichment_celltype_v019_2=CL:0000540,7.68e-26,33;CL:0000047,7.68e-26,33;CL:0000031,7.68e-26,33;CL:0000404,7.68e-26,33;CL:0002319,8.16e-21,43;CL:0000393,2.23e-20,39;CL:0000211,2.23e-20,39;CL:0000221,4.12e-20,44;CL:0000133,4.12e-20,44;CL:0000117,6.60e-19,23;CL:0000337,6.60e-19,23;CL:0002321,3.98e-09,70;CL:0000107,5.44e-09,9
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!2.96e-38!75;UBERON:0001016!2.96e-38!75;UBERON:0001017!5.24e-38!73;UBERON:0005743!5.24e-38!73;UBERON:0004121!7.96e-32!102;UBERON:0000924!7.96e-32!102;UBERON:0006601!7.96e-32!102;UBERON:0002346!5.17e-28!71;UBERON:0003075!5.17e-28!71;UBERON:0007284!5.17e-28!71;UBERON:0001049!3.46e-26!52;UBERON:0005068!3.46e-26!52;UBERON:0006241!3.46e-26!52;UBERON:0007135!3.46e-26!52;UBERON:0000033!1.84e-25!63;UBERON:0000955!1.22e-24!50;UBERON:0006238!1.22e-24!50;UBERON:0002616!8.03e-24!49;UBERON:0002020!1.07e-21!34;UBERON:0003056!2.74e-21!49;UBERON:0003080!3.64e-19!40;UBERON:0002780!2.27e-18!39;UBERON:0001890!2.27e-18!39;UBERON:0006240!2.27e-18!39;UBERON:0002791!4.55e-18!29;UBERON:0003528!4.55e-18!29;UBERON:0001893!4.55e-18!29;UBERON:0007811!9.24e-14!86;UBERON:0000956!6.66e-13!21;UBERON:0001869!6.66e-13!21;UBERON:0000203!6.66e-13!21;UBERON:0000153!7.14e-11!94;UBERON:0002619!8.62e-11!17;UBERON:0002021!1.69e-09!10;UBERON:0000411!1.69e-09!10;UBERON:0001950!1.69e-09!10;UBERON:0003076!1.51e-07!12;UBERON:0003057!1.51e-07!12
|ontology_enrichment_uberon=UBERON:0000073!2.96e-38!75;UBERON:0001016!2.96e-38!75;UBERON:0001017!5.24e-38!73;UBERON:0005743!5.24e-38!73;UBERON:0004121!7.96e-32!102;UBERON:0000924!7.96e-32!102;UBERON:0006601!7.96e-32!102;UBERON:0002346!5.17e-28!71;UBERON:0003075!5.17e-28!71;UBERON:0007284!5.17e-28!71;UBERON:0001049!3.46e-26!52;UBERON:0005068!3.46e-26!52;UBERON:0006241!3.46e-26!52;UBERON:0007135!3.46e-26!52;UBERON:0000033!1.84e-25!63;UBERON:0000955!1.22e-24!50;UBERON:0006238!1.22e-24!50;UBERON:0002616!8.03e-24!49;UBERON:0002020!1.07e-21!34;UBERON:0003056!2.74e-21!49;UBERON:0003080!3.64e-19!40;UBERON:0002780!2.27e-18!39;UBERON:0001890!2.27e-18!39;UBERON:0006240!2.27e-18!39;UBERON:0002791!4.55e-18!29;UBERON:0003528!4.55e-18!29;UBERON:0001893!4.55e-18!29;UBERON:0007811!9.24e-14!86;UBERON:0000956!6.66e-13!21;UBERON:0001869!6.66e-13!21;UBERON:0000203!6.66e-13!21;UBERON:0000153!7.14e-11!94;UBERON:0002619!8.62e-11!17;UBERON:0002021!1.69e-09!10;UBERON:0000411!1.69e-09!10;UBERON:0001950!1.69e-09!10;UBERON:0003076!1.51e-07!12;UBERON:0003057!1.51e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.72e-47,73;UBERON:0001016,1.99e-45,75;UBERON:0004121,1.99e-36,95;UBERON:0000924,1.99e-36,95;UBERON:0006601,1.99e-36,95;UBERON:0000073,1.20e-33,54;UBERON:0002346,3.71e-32,64;UBERON:0003075,3.71e-32,64;UBERON:0007284,3.71e-32,64;UBERON:0001049,1.42e-31,52;UBERON:0005068,1.42e-31,52;UBERON:0006241,1.42e-31,52;UBERON:0007135,1.42e-31,52;UBERON:0002020,1.20e-29,34;UBERON:0010371,2.28e-26,73;UBERON:0000955,3.25e-26,47;UBERON:0006238,3.25e-26,47;UBERON:0002616,4.40e-25,46;UBERON:0003528,3.29e-24,29;UBERON:0002791,3.29e-24,29;UBERON:0001893,3.29e-24,29;UBERON:0003080,4.03e-22,40;UBERON:0002780,5.36e-21,39;UBERON:0001890,5.36e-21,39;UBERON:0006240,5.36e-21,39;UBERON:0003056,3.44e-20,49;UBERON:0010314,6.58e-19,92;UBERON:0000956,1.76e-16,21;UBERON:0001869,1.76e-16,21;UBERON:0000203,1.76e-16,21;UBERON:0002021,1.43e-13,10;UBERON:0000411,1.43e-13,10;UBERON:0001950,1.43e-13,10;UBERON:0002619,2.65e-13,17;UBERON:0003076,8.27e-10,12;UBERON:0003057,8.27e-10,12;UBERON:0002410,5.44e-09,9;UBERON:0002420,6.95e-09,8;UBERON:0007245,6.95e-09,8;UBERON:0010009,6.95e-09,8;UBERON:0010011,6.95e-09,8;UBERON:0000454,6.95e-09,8;UBERON:0011216,3.10e-08,194;UBERON:0000025,1.05e-07,114;UBERON:0002240,1.08e-07,6;UBERON:0005174,1.08e-07,6;UBERON:0001137,1.08e-07,6;UBERON:0000010,5.47e-07,11
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.219686182734472,0,0.55994568650145,0,0,0,0,0,0,0,1.61853168687678,1.05798195854407,1.26766280701236,0,0,0,0,0,7.19040265244171,7.30014780110954,1.8664130215526,1.35005938331691,1.26194976810829,12.8542942981712,11.0434270475807,1.95985278743926,0.958454710182364,1.83843757322004,4.40463523997555,11.3641730895817,9.83081812839958,1.58263545276233,1.46380229763855,3.12548022334056,6.70039197603314,10.1297269805702,13.9046405476897,7.66034322231536,10.9626194215309,2.79599168737951,0.227178579999552,0.453429360640713,0,0,0,0,0,0,0.140444420131752,0,0,0,0.422530259330042,0,0,0,0,0,0,0.22836775943812,0,1.33597925158342,0,0.608930956624282,0,0,0.117588707135705,0,0,0,0,0,0,0,0,10.2473278954042,18.850203613211,0,0,0,0,13.0317856282196,14.1825186873774,3.5183218591602,17.7300806596122,21.9915293304084,11.6361304953354,22.8760180925538,0,0,0,1.89397670297827,0,0.919608417733892,0.540186389416048,0.753524089178575,0.884474488967262,0.768682321709099,1.12442069471675,6.20888089773638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.6084149592845,2.57261530948211,0,0,0.213288250535234,1.39342003116263,1.03093969057675,0.403367049246685,0,0.760902504450237,0.474529061544512,0,0,0.397912944082302,0.779856348476481,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0.195133647857799,0,0,0,0,0,0,0,0,0,0,11.559642479121,18.8710815413447,0,0,2.2085575359138,3.51394869866975,2.36965737506079,1.91175038362042,3.11918143715352,3.67999490025482,2.42886421004937,2.92255857911312,5.13874111330481,12.5315313404505,0,0,0,0,0,0.242780636154981,0.302323556964751,0.377210159511796,0,0.307435147943927,1.03371317267288,0.727067458955011,0,0,0,0,4.76615448055303,0,0,0,0.532020700926821,0.535106452806212,0.987294123612726,0.913394847343798,0,0,0.661585194164886,0,0,0,0,0,0.291480836629851,12.2380699326936,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0.648032044930808,0.627264888043406,0,0.404593039154462,0,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,15.8130515932779,19.7939851698086,17.7597609166213,12.2015759464018,16.4419804744954,16.6186657425734,19.5756525067224,12.6089936902782,13.5942722695261,10.8729665467882,0,0,0,0.486213434136588,0.209613162627982,0.183843508450014,1.11123363900808,0.618105171716683,1.28367683836726,1.26348605881899,0.760437899670719,0.565879024158229,1.31098110457835,0.89635213366817,0.976402972245426,1.42888107384922,0.927074607558844,0.77163688185482,0.412085900803307,1.32479028120958,1.37147700954166,0.354951612318675,1.1921809497366,1.0174249164263,0.564656282491984,0.592302255241736,0.914639864363863,0,2.44447404922551,0.561142271657738,0.949080144993393,0.788035859004508,1.63692417267876,0.929621047115796,0.964533054905707,1.49886346762768,1.63752125911786,1.07435527024149,0.191288332068843,0.661774257358546,0.927471342481686
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.219686182734472,0,0.55994568650145,0,0,0,0,0,0,0,1.61853168687678,1.05798195854407,1.26766280701236,0,0,0,0,0,7.19040265244171,7.30014780110954,1.8664130215526,1.35005938331691,1.26194976810829,12.8542942981712,11.0434270475807,1.95985278743926,0.958454710182364,1.83843757322004,4.40463523997555,11.3641730895817,9.83081812839958,1.58263545276233,1.46380229763855,3.12548022334056,6.70039197603314,10.1297269805702,13.9046405476897,7.66034322231536,10.9626194215309,2.79599168737951,0.227178579999552,0.453429360640713,0,0,0,0,0,0,0.140444420131752,0,0,0,0.422530259330042,0,0,0,0,0,0,0.22836775943812,0,1.33597925158342,0,0.608930956624282,0,0,0.117588707135705,0,0,0,0,0,0,0,0,10.2473278954042,18.850203613211,0,0,0,0,13.0317856282196,14.1825186873774,3.5183218591602,17.7300806596122,21.9915293304084,11.6361304953354,22.8760180925538,0,0,0,1.89397670297827,0,0.919608417733892,0.540186389416048,0.753524089178575,0.884474488967262,0.768682321709099,1.12442069471675,6.20888089773638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.6084149592845,2.57261530948211,0,0,0.213288250535234,1.39342003116263,1.03093969057675,0.403367049246685,0,0.760902504450237,0.474529061544512,0,0,0.397912944082302,0.779856348476481,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0.195133647857799,0,0,0,0,0,0,0,0,0,0,11.559642479121,18.8710815413447,0,0,2.2085575359138,3.51394869866975,2.36965737506079,1.91175038362042,3.11918143715352,3.67999490025482,2.42886421004937,2.92255857911312,5.13874111330481,12.5315313404505,0,0,0,0,0,0.242780636154981,0.302323556964751,0.377210159511796,0,0.307435147943927,1.03371317267288,0.727067458955011,0,0,0,0,4.76615448055303,0,0,0,0.532020700926821,0.535106452806212,0.987294123612726,0.913394847343798,0,0,0.661585194164886,0,0,0,0,0,0.291480836629851,12.2380699326936,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0.648032044930808,0.627264888043406,0,0.404593039154462,0,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,15.8130515932779,19.7939851698086,17.7597609166213,12.2015759464018,16.4419804744954,16.6186657425734,19.5756525067224,12.6089936902782,13.5942722695261,10.8729665467882,0,0,0,0.486213434136588,0.209613162627982,0.183843508450014,1.11123363900808,0.618105171716683,1.28367683836726,1.26348605881899,0.760437899670719,0.565879024158229,1.31098110457835,0.89635213366817,0.976402972245426,1.42888107384922,0.927074607558844,0.77163688185482,0.412085900803307,1.32479028120958,1.37147700954166,0.354951612318675,1.1921809497366,1.0174249164263,0.564656282491984,0.592302255241736,0.914639864363863,0,2.44447404922551,0.561142271657738,0.949080144993393,0.788035859004508,1.63692417267876,0.929621047115796,0.964533054905707,1.49886346762768,1.63752125911786,1.07435527024149,0.191288332068843,0.661774257358546,0.927471342481686
|short_description=p2@Tnr
|short_description=p2@Tnr
}}
}}

Latest revision as of 15:28, 26 September 2015

Short description:p2@Tnr
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Tnr_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 107bp_to_NM_022312, uc007dea.2_5end
EntrezGene:Tnr
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Tnr

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.45
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.62
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C87.19
Mouse Microglia, donor2.CNhs12634.11736-123E87.30
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.87
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F112.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D511.04
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.96
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.96
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F311.36
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.83
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.58
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.70
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E510.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I613.90
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.66
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F610.96
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.80
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.34
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B210.25
cerebellum, neonate N30.CNhs11135.1395-42I218.85
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A413.03
corpus striatum, adult.CNhs10487.19-21D814.18
corpus striatum, neonate N00.CNhs11226.630-43F13.52
cortex, adult.CNhs10473.12-14D517.73
cortex, neonate N30.CNhs11107.1392-42F221.99
diencephalon, adult.CNhs10482.20-12F211.64
diencephalon, neonate N30.CNhs11201.1388-42B222.88
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.89
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C60.88
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G81.12
eyeball, neonate N16.CNhs11188.777-19A26.21
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E820.61
hippocampus, neonate N00.CNhs11228.627-43G12.57
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D81.03
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C211.56
medulla oblongata, neonate N30.CNhs11200.1396-42A318.87
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.51
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.37
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.91
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.12
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.68
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.92
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.14
olfactory brain, adult.CNhs10489.18-22I912.53
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G84.77
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C912.24
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A115.81
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A219.79
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A317.76
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D712.20
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A416.44
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A516.62
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A619.58
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A712.61
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A813.59
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A910.87
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.90
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.98
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.44
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system3.72e-4773
nervous system1.99e-4575
ectoderm-derived structure1.99e-3695
ectoderm1.99e-3695
presumptive ectoderm1.99e-3695
regional part of nervous system1.20e-3354
neurectoderm3.71e-3264
neural plate3.71e-3264
presumptive neural plate3.71e-3264
neural tube1.42e-3152
neural rod1.42e-3152
future spinal cord1.42e-3152
neural keel1.42e-3152
gray matter1.20e-2934
ecto-epithelium2.28e-2673
brain3.25e-2647
future brain3.25e-2647
regional part of brain4.40e-2546
brain grey matter3.29e-2429
regional part of telencephalon3.29e-2429
telencephalon3.29e-2429
anterior neural tube4.03e-2240
regional part of forebrain5.36e-2139
forebrain5.36e-2139
future forebrain5.36e-2139
pre-chordal neural plate3.44e-2049
structure with developmental contribution from neural crest6.58e-1992
cerebral cortex1.76e-1621
cerebral hemisphere1.76e-1621
pallium1.76e-1621
occipital lobe1.43e-1310
visual cortex1.43e-1310
neocortex1.43e-1310
regional part of cerebral cortex2.65e-1317
posterior neural tube8.27e-1012
chordal neural plate8.27e-1012
autonomic nervous system5.44e-099
basal ganglion6.95e-098
nuclear complex of neuraxis6.95e-098
aggregate regional part of brain6.95e-098
collection of basal ganglia6.95e-098
cerebral subcortex6.95e-098
organ system subdivision3.10e-08194
tube1.05e-07114
spinal cord1.08e-076
dorsal region element1.08e-076
dorsum1.08e-076
peripheral nervous system5.47e-0711
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr1:161454007..161454026,%2B&oldid=4260746"