FFCP PHASE1:Mm9::chr2:29980294..29980327,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=227693 | |EntrezGene=227693 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2 | |MCL_coexpression_id=2 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-189bp_to_ENSMUST00000154231_5end | |association_with_transcript=-189bp_to_ENSMUST00000154231_5end | ||
|cluster_id=chr2:29980294..29980327,- | |||
|description=CAGE_peak_3_at_Zer1_5end | |description=CAGE_peak_3_at_Zer1_5end | ||
|id=chr2:29980294..29980327,- | |id=chr2:29980294..29980327,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.20e-07,23;CL:0000337,2.20e-07,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!5.45e-16!50;UBERON:0006238!5.45e-16!50;UBERON:0002616!2.14e-15!49;UBERON:0001049!2.43e-15!52;UBERON:0005068!2.43e-15!52;UBERON:0006241!2.43e-15!52;UBERON:0007135!2.43e-15!52;UBERON:0000033!3.88e-13!63;UBERON:0002346!6.70e-13!71;UBERON:0003075!6.70e-13!71;UBERON:0007284!6.70e-13!71;UBERON:0001017!8.48e-13!73;UBERON:0005743!8.48e-13!73;UBERON:0000073!2.65e-12!75;UBERON:0001016!2.65e-12!75;UBERON:0004121!4.42e-12!102;UBERON:0000924!4.42e-12!102;UBERON:0006601!4.42e-12!102;UBERON:0003080!4.16e-11!40;UBERON:0002020!1.03e-10!34;UBERON:0002780!1.36e-10!39;UBERON:0001890!1.36e-10!39;UBERON:0006240!1.36e-10!39;UBERON:0002791!1.11e-09!29;UBERON:0003528!1.11e-09!29;UBERON:0001893!1.11e-09!29;UBERON:0002619!1.59e-08!17;UBERON:0003056!1.75e-08!49;UBERON:0002021!3.47e-08!10;UBERON:0000411!3.47e-08!10;UBERON:0001950!3.47e-08!10;UBERON:0007811!1.03e-07!86 | |ontology_enrichment_uberon=UBERON:0000955!5.45e-16!50;UBERON:0006238!5.45e-16!50;UBERON:0002616!2.14e-15!49;UBERON:0001049!2.43e-15!52;UBERON:0005068!2.43e-15!52;UBERON:0006241!2.43e-15!52;UBERON:0007135!2.43e-15!52;UBERON:0000033!3.88e-13!63;UBERON:0002346!6.70e-13!71;UBERON:0003075!6.70e-13!71;UBERON:0007284!6.70e-13!71;UBERON:0001017!8.48e-13!73;UBERON:0005743!8.48e-13!73;UBERON:0000073!2.65e-12!75;UBERON:0001016!2.65e-12!75;UBERON:0004121!4.42e-12!102;UBERON:0000924!4.42e-12!102;UBERON:0006601!4.42e-12!102;UBERON:0003080!4.16e-11!40;UBERON:0002020!1.03e-10!34;UBERON:0002780!1.36e-10!39;UBERON:0001890!1.36e-10!39;UBERON:0006240!1.36e-10!39;UBERON:0002791!1.11e-09!29;UBERON:0003528!1.11e-09!29;UBERON:0001893!1.11e-09!29;UBERON:0002619!1.59e-08!17;UBERON:0003056!1.75e-08!49;UBERON:0002021!3.47e-08!10;UBERON:0000411!3.47e-08!10;UBERON:0001950!3.47e-08!10;UBERON:0007811!1.03e-07!86 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.19e-25,54;UBERON:0001049,8.44e-23,52;UBERON:0005068,8.44e-23,52;UBERON:0006241,8.44e-23,52;UBERON:0007135,8.44e-23,52;UBERON:0000955,9.86e-21,47;UBERON:0006238,9.86e-21,47;UBERON:0001017,2.85e-20,73;UBERON:0002616,9.10e-20,46;UBERON:0001016,2.47e-19,75;UBERON:0002020,2.29e-17,34;UBERON:0002346,4.13e-16,64;UBERON:0003075,4.13e-16,64;UBERON:0007284,4.13e-16,64;UBERON:0003080,2.24e-15,40;UBERON:0003528,2.69e-15,29;UBERON:0002791,2.69e-15,29;UBERON:0001893,2.69e-15,29;UBERON:0002780,1.58e-14,39;UBERON:0001890,1.58e-14,39;UBERON:0006240,1.58e-14,39;UBERON:0010371,1.98e-13,73;UBERON:0002021,3.92e-13,10;UBERON:0000411,3.92e-13,10;UBERON:0001950,3.92e-13,10;UBERON:0004121,5.60e-13,95;UBERON:0000924,5.60e-13,95;UBERON:0006601,5.60e-13,95;UBERON:0010314,1.39e-11,92;UBERON:0002619,6.74e-11,17;UBERON:0003056,6.96e-11,49;UBERON:0000956,1.46e-09,21;UBERON:0001869,1.46e-09,21;UBERON:0000203,1.46e-09,21;UBERON:0000025,2.05e-08,114;UBERON:0003076,2.78e-08,12;UBERON:0003057,2.78e-08,12;UBERON:0004111,4.97e-08,122;UBERON:0002420,2.66e-07,8;UBERON:0007245,2.66e-07,8;UBERON:0010009,2.66e-07,8;UBERON:0010011,2.66e-07,8;UBERON:0000454,2.66e-07,8 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0.903863264091034,0.140788722151667,0,0.34243593645101,0.0797721589953364,0.342401459862411,0.34968160967599,1.99865857089398,1.82227740650843,4.19737126876888,0.473193248037357,0.137114433605739,0,2.38121212422995,1.19149141441062,0.522399578277871,0.159992422793407,0.45881856213434,0.57423196411502,0,0,0,0.252030129759931,0.221730510655305,2.54012269383853,0,0,0,0.166234645358492,0.204169356262369,0.418531630736908,0,1.0470474879476,1.76469446409304,1.36609096991689,0.971020706062307,0.251793635951155,1.01376931219515,0.367093504323363,2.34717403304412,1.09012578190223,2.19686182734472,0.777719596297134,0.699932108126813,0,0.838913030288682,0,2.68875039313971,0.257259436035947,0.573066879877513,1.03134418455488,1.01158230429799,1.5869729378161,0.633831403506179,0.677689064138264,1.77858959222228,0,0,0,2.09720077362883,0.384218305321555,0.103689612308478,0,0,1.71390590642282,1.54607978666129,0.489963196859816,0.383381884072945,1.83843757322004,5.50579404996943,2.42605942361857,3.84016333140609,1.05509030184155,1.00636407962651,1.56274011167028,2.51264699101243,3.37657566019008,3.36156145108982,2.65165726926301,1.85083185038834,0.186399445825301,0.227178579999552,0.377857800533928,0.289864488701678,0,0,0,0,0,0.842666520790511,0.340860645156116,0.259786004602869,1.06001872353102,1.26759077799012,0,0,0,0,0.253359865475099,0,0.5709193985953,0.517875767294343,1.03909497345377,0.520455980298408,2.13125834818499,1.61430848079241,0.904335843315735,1.99900802130698,0.628332956648377,0.741584903203122,0.144599356919912,0,0.485300549842228,0.662524555381181,0.969750506270444,0,2.04946557908083,2.30391377494801,0,3.59445373517761,1.19980546198682,3.04968544975355,3.14560342750128,14.1825186873774,2.1361239859187,14.2535942557667,11.7629110371952,4.36354893575076,7.78758062725237,0.305518091550949,1.49288364732112,2.52722758433675,0.631325567659422,0.130120442962704,0,0,0.60281927134286,0.748401490664606,0.384341160854549,0.187403449119458,0.517406741478031,0.215567992932842,0.189106080167819,0,0.43839146485515,0,1.39300866608867,0.205782136407943,0,0.702213187313235,1.80143534980301,1.98914449576915,0,0.469052119962192,0,0.23674473558521,0.196764231747404,0.308534225774757,0,0.268273401399619,0.467061369468678,0.16455984991348,0,0.486412857275134,0.146199987425332,0,0.402619256281115,14.7202963994889,0.720332286654991,0,0,0,0.232236671860439,0.38660238396628,0,0.22237804384487,0,0,0.164698954724011,0,0.795825888164603,0.38992817423824,0.898819408654221,0,0,0,0.228497025219458,0,0.610953983535943,0.387904974335251,0.561086559122548,0.442655759869801,0,0.156998727841375,0.370191491765402,0,0.667380422864376,1.37591296579242,0.899448449539415,1.21716072833102,0.964708639009667,1.2731292589071,1.15078454980324,1.13494658742525,0.823684239564244,0,0,0,0,0.179397413521912,0,0.554259570499814,0.189491411770485,0.162964976442026,0,0,0.670025029767263,0.952174563544055,0.975668239288994,0.788175720530955,0.664394068946325,0.956728611944923,0.983179888294428,0.172684981865896,0.867894351489069,3.01582567878545,0.54390568381871,0,0.275936746304732,2.24770825982909,2.22702204525186,0.491804836130026,0.757412781613119,0,0,0.861693590931196,0,0,0.283076530788832,0,0,0.395287777946524,5.46246237917072,1.70328102249922,0.712262414669021,1.14020871547503,0.329940245945071,0,0.242780636154981,0.302323556964751,0,0,0,0.258428293168221,0,0.356497378384721,0.316036757935816,0,0,1.70219802876894,0.540183282093931,0.517434735131018,0.428674070063185,0.354680467284547,0.535106452806212,0.493647061806363,3.04464949114599,0.704015124191131,0,0.220528398054962,0.65954501176592,0.968786560175433,0.542816324353403,0.238744688006273,0.820704498725306,0.291480836629851,2.03967832211561,0.341741761595705,1.03193433981611,0.185194527369712,0.941842285023455,1.36694227721025,1.37266903923914,6.28920190977265,6.01791244991729,6.35719879500349,0.954670618015114,0.790839983952838,0.406638934253697,0.756037385752609,1.04544148007234,0,0.539457385539283,1.32245529160537,0,0,0.621339313086926,0,0.299033092087958,0.330916980914195,0.388902376688095,0.258319646955462,0.168956125490778,0.821500670520278,0.911430693907651,0.209718688851422,0.483168241652012,0,0.632022241256357,0,0.410843828659309,0.51968329191118,0.358053391334963,0.198681354781265,0.240390899039938,0.590758108698309,0.100966449948148,0.685861259894999,0.302478555410522,0.682205165178267,0.192423683280659,0.935015217452552,0.453460767230423,0.221985953374065,0.0897138566094757,0.167884616364078,1.15913756419314,1.31377732815827,0.549454872801795,0.857473516316263,0.501572104035363,11.2950368523413,13.3494318587081,10.3121192419091,12.2015759464018,19.8673930733486,18.1294535373528,21.6007200074178,24.3173449741079,19.4851235863208,20.7104124700728,0.207574695168353,0.399024873401031,0.512200817262403,0.243106717068294,0.209613162627982,0,0.222246727801615,0.412070114477788,0.962757628775446,0,0.50695859978048,0.188626341386076,0.561849044819294,0.512201219238954,0.574354689556133,0,0.579421629724277,0.38581844092741,0.824171801606613,0.883193520806384,0.342869252385415,0.177475806159338,0,0.290692833264657,0.376437521661322,0.592302255241736,0.548783918618318,0,0.271608227691724,0.561142271657738,0.118635018124174,0.197008964751127,0.818462086339379,0.154936841185966,0.192906610981141,0.749431733813838,0.935726433781634,0.429742108096597,1.91288332068843,0.441182838239031,1.15933917810211 | |phase1_expression=0.640595388419176,0,0,0,0,0,0,0.903863264091034,0.140788722151667,0,0.34243593645101,0.0797721589953364,0.342401459862411,0.34968160967599,1.99865857089398,1.82227740650843,4.19737126876888,0.473193248037357,0.137114433605739,0,2.38121212422995,1.19149141441062,0.522399578277871,0.159992422793407,0.45881856213434,0.57423196411502,0,0,0,0.252030129759931,0.221730510655305,2.54012269383853,0,0,0,0.166234645358492,0.204169356262369,0.418531630736908,0,1.0470474879476,1.76469446409304,1.36609096991689,0.971020706062307,0.251793635951155,1.01376931219515,0.367093504323363,2.34717403304412,1.09012578190223,2.19686182734472,0.777719596297134,0.699932108126813,0,0.838913030288682,0,2.68875039313971,0.257259436035947,0.573066879877513,1.03134418455488,1.01158230429799,1.5869729378161,0.633831403506179,0.677689064138264,1.77858959222228,0,0,0,2.09720077362883,0.384218305321555,0.103689612308478,0,0,1.71390590642282,1.54607978666129,0.489963196859816,0.383381884072945,1.83843757322004,5.50579404996943,2.42605942361857,3.84016333140609,1.05509030184155,1.00636407962651,1.56274011167028,2.51264699101243,3.37657566019008,3.36156145108982,2.65165726926301,1.85083185038834,0.186399445825301,0.227178579999552,0.377857800533928,0.289864488701678,0,0,0,0,0,0.842666520790511,0.340860645156116,0.259786004602869,1.06001872353102,1.26759077799012,0,0,0,0,0.253359865475099,0,0.5709193985953,0.517875767294343,1.03909497345377,0.520455980298408,2.13125834818499,1.61430848079241,0.904335843315735,1.99900802130698,0.628332956648377,0.741584903203122,0.144599356919912,0,0.485300549842228,0.662524555381181,0.969750506270444,0,2.04946557908083,2.30391377494801,0,3.59445373517761,1.19980546198682,3.04968544975355,3.14560342750128,14.1825186873774,2.1361239859187,14.2535942557667,11.7629110371952,4.36354893575076,7.78758062725237,0.305518091550949,1.49288364732112,2.52722758433675,0.631325567659422,0.130120442962704,0,0,0.60281927134286,0.748401490664606,0.384341160854549,0.187403449119458,0.517406741478031,0.215567992932842,0.189106080167819,0,0.43839146485515,0,1.39300866608867,0.205782136407943,0,0.702213187313235,1.80143534980301,1.98914449576915,0,0.469052119962192,0,0.23674473558521,0.196764231747404,0.308534225774757,0,0.268273401399619,0.467061369468678,0.16455984991348,0,0.486412857275134,0.146199987425332,0,0.402619256281115,14.7202963994889,0.720332286654991,0,0,0,0.232236671860439,0.38660238396628,0,0.22237804384487,0,0,0.164698954724011,0,0.795825888164603,0.38992817423824,0.898819408654221,0,0,0,0.228497025219458,0,0.610953983535943,0.387904974335251,0.561086559122548,0.442655759869801,0,0.156998727841375,0.370191491765402,0,0.667380422864376,1.37591296579242,0.899448449539415,1.21716072833102,0.964708639009667,1.2731292589071,1.15078454980324,1.13494658742525,0.823684239564244,0,0,0,0,0.179397413521912,0,0.554259570499814,0.189491411770485,0.162964976442026,0,0,0.670025029767263,0.952174563544055,0.975668239288994,0.788175720530955,0.664394068946325,0.956728611944923,0.983179888294428,0.172684981865896,0.867894351489069,3.01582567878545,0.54390568381871,0,0.275936746304732,2.24770825982909,2.22702204525186,0.491804836130026,0.757412781613119,0,0,0.861693590931196,0,0,0.283076530788832,0,0,0.395287777946524,5.46246237917072,1.70328102249922,0.712262414669021,1.14020871547503,0.329940245945071,0,0.242780636154981,0.302323556964751,0,0,0,0.258428293168221,0,0.356497378384721,0.316036757935816,0,0,1.70219802876894,0.540183282093931,0.517434735131018,0.428674070063185,0.354680467284547,0.535106452806212,0.493647061806363,3.04464949114599,0.704015124191131,0,0.220528398054962,0.65954501176592,0.968786560175433,0.542816324353403,0.238744688006273,0.820704498725306,0.291480836629851,2.03967832211561,0.341741761595705,1.03193433981611,0.185194527369712,0.941842285023455,1.36694227721025,1.37266903923914,6.28920190977265,6.01791244991729,6.35719879500349,0.954670618015114,0.790839983952838,0.406638934253697,0.756037385752609,1.04544148007234,0,0.539457385539283,1.32245529160537,0,0,0.621339313086926,0,0.299033092087958,0.330916980914195,0.388902376688095,0.258319646955462,0.168956125490778,0.821500670520278,0.911430693907651,0.209718688851422,0.483168241652012,0,0.632022241256357,0,0.410843828659309,0.51968329191118,0.358053391334963,0.198681354781265,0.240390899039938,0.590758108698309,0.100966449948148,0.685861259894999,0.302478555410522,0.682205165178267,0.192423683280659,0.935015217452552,0.453460767230423,0.221985953374065,0.0897138566094757,0.167884616364078,1.15913756419314,1.31377732815827,0.549454872801795,0.857473516316263,0.501572104035363,11.2950368523413,13.3494318587081,10.3121192419091,12.2015759464018,19.8673930733486,18.1294535373528,21.6007200074178,24.3173449741079,19.4851235863208,20.7104124700728,0.207574695168353,0.399024873401031,0.512200817262403,0.243106717068294,0.209613162627982,0,0.222246727801615,0.412070114477788,0.962757628775446,0,0.50695859978048,0.188626341386076,0.561849044819294,0.512201219238954,0.574354689556133,0,0.579421629724277,0.38581844092741,0.824171801606613,0.883193520806384,0.342869252385415,0.177475806159338,0,0.290692833264657,0.376437521661322,0.592302255241736,0.548783918618318,0,0.271608227691724,0.561142271657738,0.118635018124174,0.197008964751127,0.818462086339379,0.154936841185966,0.192906610981141,0.749431733813838,0.935726433781634,0.429742108096597,1.91288332068843,0.441182838239031,1.15933917810211 | ||
|short_description=p3@Zer1 | |short_description=p3@Zer1 | ||
}} | }} |
Latest revision as of 12:52, 26 September 2015
Short description: | p3@Zer1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Zer1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | -189bp_to_ENSMUST00000154231_5end |
EntrezGene: | Zer1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.20e-07 | 23 |
neuroblast (sensu Vertebrata) | 2.20e-07 | 23 |