FFCP PHASE1:Hg19::chr3:13114890..13114902,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:13114890..13114902,-
|short_description=p8@IQSEC1
|description=CAGE_peak_8_at_IQSEC1_5end
|association_with_transcript=-273bp_to_ENST00000429247,ENST000004...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9922 | |EntrezGene=9922 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29112 | |HGNC=29112 | ||
|TSSclassifier=strong | |||
|UniProt=C9JMG9,E9PG60,B4DGC5,Q6DN90 | |UniProt=C9JMG9,E9PG60,B4DGC5,Q6DN90 | ||
|association_with_transcript=-273bp_to_ENST00000429247,ENST00000435445,NM_001134382,uc011auw.1_5end | |||
|cluster_id=chr3:13114890..13114902,- | |||
|description=CAGE_peak_8_at_IQSEC1_5end | |||
|id=chr3:13114890..13114902,- | |||
|ontology_enrichment_celltype=CL:0000542!1.36e-21!53;CL:0000051!1.36e-21!53;CL:0000236!1.46e-21!14;CL:0000945!4.35e-21!24;CL:0000826!4.35e-21!24;CL:0000838!1.56e-20!52;CL:0002087!2.35e-09!119;CL:0000738!3.53e-08!140;CL:0000080!1.92e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000236;1.73e-37;13!CL:0000945;4.50e-23;24!CL:0000542;1.19e-14;53!CL:0000623;4.13e-13;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,6.42e-42,14;CL:0000945,2.49e-23,24;CL:0000826,2.49e-23,24;CL:0000542,1.79e-21,53;CL:0000051,1.79e-21,53;CL:0000838,1.55e-19,52;CL:0000623,5.56e-13,3;CL:0000825,5.56e-13,3;CL:0000785,2.43e-09,2;CL:0000955,2.43e-09,2;CL:0000818,2.43e-09,2;CL:0000954,2.43e-09,2;CL:0000816,2.43e-09,2;CL:0002087,1.48e-07,115;CL:0000738,1.52e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000051;1.19e-14;53!UBERON:0006215;1.04e-12;3!CL:0000954;1.92e-09;2!UBERON:0006601;1.25e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.29e-34!57;UBERON:0005068!3.29e-34!57;UBERON:0006241!3.29e-34!57;UBERON:0007135!3.29e-34!57;UBERON:0007023!1.34e-29!115;UBERON:0002616!3.21e-27!59;UBERON:0000073!2.20e-26!94;UBERON:0001016!2.20e-26!94;UBERON:0001017!1.49e-25!82;UBERON:0005743!7.54e-25!86;UBERON:0001893!1.65e-23!34;UBERON:0002020!1.77e-23!34;UBERON:0003528!1.77e-23!34;UBERON:0002780!4.21e-23!41;UBERON:0001890!4.21e-23!41;UBERON:0006240!4.21e-23!41;UBERON:0000955!1.43e-22!69;UBERON:0006238!1.43e-22!69;UBERON:0003080!2.45e-22!42;UBERON:0002791!3.52e-22!33;UBERON:0003075!1.55e-21!86;UBERON:0007284!1.55e-21!86;UBERON:0001869!4.07e-21!32;UBERON:0002346!5.70e-20!90;UBERON:0002619!3.24e-18!22;UBERON:0000956!4.75e-17!25;UBERON:0000203!4.75e-17!25;UBERON:0001950!8.53e-16!20;UBERON:0003056!1.29e-13!61;UBERON:0003076!3.04e-13!15;UBERON:0003057!3.04e-13!15;UBERON:0004732!2.58e-11!13;UBERON:0000153!1.07e-10!129;UBERON:0007811!1.07e-10!129;UBERON:0004733!6.81e-10!12;UBERON:0002028!6.81e-10!12;UBERON:0007277!6.81e-10!12;UBERON:0000200!9.92e-10!6;UBERON:0000033!1.03e-09!123;UBERON:0004121!1.53e-09!169;UBERON:0000924!5.10e-09!173;UBERON:0006601!5.10e-09!173;UBERON:0002680!2.33e-08!9;UBERON:0001895!2.33e-08!9;UBERON:0010092!2.33e-08!9;UBERON:0002308!6.69e-08!9;UBERON:0000125!6.69e-08!9;UBERON:0002298!3.04e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0004732;1.02e-19;13!UBERON:0004733;2.60e-16;12!UBERON:0002028;2.60e-16;12!UBERON:0002680;3.39e-16;9!UBERON:0001895;3.39e-16;9!UBERON:0000073;3.90e-15;53!UBERON:0002616;3.90e-15;53!UBERON:0001893;9.60e-15;34!UBERON:0003528;9.66e-15;34!UBERON:0002020;9.66e-15;34!UBERON:0001869;1.18e-13;32!UBERON:0000988;1.20e-13;3!UBERON:0002619;6.96e-13;22!UBERON:0001870;1.04e-12;3!UBERON:0002298;7.84e-12;6!UBERON:0002791;1.34e-11;32!UBERON:0001950;2.61e-11;20!UBERON:0000200;3.25e-11;6!UBERON:0000956;3.27e-11;25!UBERON:0000203;3.27e-11;25!UBERON:0002780;6.62e-11;41!UBERON:0001890;6.62e-11;41!UBERON:0005162;1.34e-09;2!UBERON:0000122;1.34e-09;2!UBERON:0002148;1.92e-09;2!UBERON:0006331;1.92e-09;2!UBERON:0009662;1.92e-09;2!UBERON:0000955;3.82e-09;68!UBERON:0002702;4.89e-09;2!UBERON:0001017;1.59e-08;75!UBERON:0001016;3.32e-08;83!UBERON:0000125;1.70e-07;9!UBERON:0002308;1.70e-07;9!UBERON:0007023;8.95e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.03e-26,53;UBERON:0002616,5.03e-26,53;UBERON:0001049,2.13e-24,56;UBERON:0005068,2.13e-24,56;UBERON:0006241,2.13e-24,56;UBERON:0007135,2.13e-24,56;UBERON:0000955,3.60e-21,68;UBERON:0006238,3.60e-21,68;UBERON:0001016,3.49e-20,89;UBERON:0004732,4.93e-20,13;UBERON:0001017,7.14e-19,81;UBERON:0003075,3.95e-17,82;UBERON:0007284,3.95e-17,82;UBERON:0001893,4.77e-17,34;UBERON:0003528,5.27e-17,34;UBERON:0002020,5.27e-17,34;UBERON:0004733,1.32e-16,12;UBERON:0002028,1.32e-16,12;UBERON:0007277,1.32e-16,12;UBERON:0002680,1.74e-16,9;UBERON:0001895,1.74e-16,9;UBERON:0010092,1.74e-16,9;UBERON:0002346,4.13e-16,86;UBERON:0001869,1.80e-15,32;UBERON:0007023,4.00e-15,114;UBERON:0002780,9.86e-14,41;UBERON:0001890,9.86e-14,41;UBERON:0003080,9.86e-14,41;UBERON:0006240,9.86e-14,41;UBERON:0000988,1.80e-13,3;UBERON:0001870,3.38e-13,3;UBERON:0003076,4.41e-13,15;UBERON:0003057,4.41e-13,15;UBERON:0002619,4.78e-13,22;UBERON:0002791,7.42e-13,32;UBERON:0010371,1.70e-12,104;UBERON:0002298,9.20e-12,6;UBERON:0001950,1.96e-11,20;UBERON:0000956,2.35e-11,25;UBERON:0000203,2.35e-11,25;UBERON:0000200,3.06e-11,6;UBERON:0003056,5.52e-10,61;UBERON:0010314,6.91e-10,132;UBERON:0005162,1.18e-09,2;UBERON:0000122,1.18e-09,2;UBERON:0002702,2.75e-09,2;UBERON:0002148,2.87e-09,2;UBERON:0006331,2.87e-09,2;UBERON:0009662,2.87e-09,2;UBERON:0004121,4.77e-08,171;UBERON:0000924,4.77e-08,171;UBERON:0006601,4.77e-08,171;UBERON:0011216,9.79e-08,223;UBERON:0000125,2.27e-07,9;UBERON:0002308,2.27e-07,9;UBERON:0002037,7.17e-07,6;UBERON:0006215,7.17e-07,6 | |||
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| ||
|short_description=p8@IQSEC1 | |||
}} | }} |
Latest revision as of 19:49, 24 September 2015
Short description: | p8@IQSEC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_IQSEC1_5end |
Coexpression cluster: | NA |
Association with transcript: | -273bp_to_ENST00000429247, ENST00000435445, NM_001134382, uc011auw.1_5end |
EntrezGene: | IQSEC1 |
HGNC: | 29112 |
UniProt: | C9JMG9E9PG60B4DGC5Q6DN90 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 6.42e-42 | 14 |
lymphocyte of B lineage | 2.49e-23 | 24 |
pro-B cell | 2.49e-23 | 24 |
lymphocyte | 1.79e-21 | 53 |
common lymphoid progenitor | 1.79e-21 | 53 |
lymphoid lineage restricted progenitor cell | 1.55e-19 | 52 |
natural killer cell | 5.56e-13 | 3 |
pro-NK cell | 5.56e-13 | 3 |
mature B cell | 2.43e-09 | 2 |
pre-B-II cell | 2.43e-09 | 2 |
transitional stage B cell | 2.43e-09 | 2 |
small pre-B-II cell | 2.43e-09 | 2 |
immature B cell | 2.43e-09 | 2 |
nongranular leukocyte | 1.48e-07 | 115 |
leukocyte | 1.52e-07 | 136 |