FFCP PHASE1:Hg19::chr3:132757215..132757247,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:132757215..132757247,+
|short_description=p1@TMEM108
|description=CAGE_peak_1_at_TMEM108_5end
|association_with_transcript=0bp_to_ENST00000321871,ENST00000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=66000 | |EntrezGene=66000 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28451 | |HGNC=28451 | ||
|TSSclassifier=strong | |||
|UniProt=Q6UXF1 | |UniProt=Q6UXF1 | ||
|association_with_transcript=0bp_to_ENST00000321871,ENST00000393130,ENST00000514529_5end | |||
|cluster_id=chr3:132757215..132757247,+ | |||
|coexpression_cluster_id=C4284 | |||
|description=CAGE_peak_1_at_TMEM108_5end | |||
|id=chr3:132757215..132757247,+ | |||
|ontology_enrichment_celltype=CL:0002319!1.32e-08!25;CL:0000133!5.38e-08!59;CL:0000047!2.53e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002319;1.85e-11;25!CL:0000128;1.96e-07;7!CL:0000126;1.96e-07;7!CL:0000127;1.96e-07;7!CL:0000540;5.97e-07;6!CL:0000404;5.97e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.19e-11,25;CL:0000133,6.19e-10,59;CL:0000047,3.56e-09,8;CL:0000128,2.27e-07,7;CL:0000126,2.27e-07,7;CL:0000127,2.27e-07,7;CL:0002453,2.27e-07,7;CL:0000540,6.71e-07,6;CL:0000031,6.71e-07,6;CL:0000404,6.71e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.32e-11;82!CL:0000031;5.97e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;2.15e-27;32!UBERON:0000073;2.58e-27;53!UBERON:0002616;2.58e-27;53!UBERON:0001893;3.74e-27;34!UBERON:0002780;4.46e-27;41!UBERON:0001890;4.46e-27;41!UBERON:0000956;4.73e-27;25!UBERON:0000203;4.73e-27;25!UBERON:0002791;6.74e-27;32!UBERON:0003528;6.86e-27;34!UBERON:0002020;6.86e-27;34!UBERON:0002619;2.46e-24;22!UBERON:0001950;1.58e-22;20!UBERON:0000955;3.68e-20;68!UBERON:0001017;7.52e-20;75!UBERON:0001016;4.69e-19;83!UBERON:0007023;7.17e-11;114!UBERON:0004733;7.65e-11;12!UBERON:0002028;7.65e-11;12!UBERON:0004732;1.00e-09;13!UBERON:0000922;5.57e-09;49!UBERON:0002680;1.20e-08;9!UBERON:0001895;1.20e-08;9!UBERON:0011216;1.35e-08;132!UBERON:0001871;3.72e-08;6!UBERON:0000200;1.17e-07;6!UBERON:0001894;1.91e-07;7!UBERON:0001872;7.57e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.08e-58,81;UBERON:0001016,2.30e-55,89;UBERON:0001049,8.79e-50,56;UBERON:0005068,8.79e-50,56;UBERON:0006241,8.79e-50,56;UBERON:0007135,8.79e-50,56;UBERON:0000073,1.59e-47,53;UBERON:0002616,1.59e-47,53;UBERON:0000955,1.15e-45,68;UBERON:0006238,1.15e-45,68;UBERON:0003075,1.23e-44,82;UBERON:0007284,1.23e-44,82;UBERON:0007023,1.81e-41,114;UBERON:0002346,2.22e-41,86;UBERON:0002780,1.13e-37,41;UBERON:0001890,1.13e-37,41;UBERON:0003080,1.13e-37,41;UBERON:0006240,1.13e-37,41;UBERON:0003056,2.02e-34,61;UBERON:0010371,5.25e-34,104;UBERON:0004121,9.69e-33,171;UBERON:0000924,9.69e-33,171;UBERON:0006601,9.69e-33,171;UBERON:0001893,1.40e-31,34;UBERON:0003528,3.09e-31,34;UBERON:0002020,3.09e-31,34;UBERON:0001869,3.03e-30,32;UBERON:0002791,1.28e-29,32;UBERON:0010314,3.01e-28,132;UBERON:0000956,4.80e-27,25;UBERON:0000203,4.80e-27,25;UBERON:0011216,1.11e-26,223;UBERON:0002619,2.51e-24,22;UBERON:0001950,1.62e-22,20;UBERON:0003076,7.16e-13,15;UBERON:0003057,7.16e-13,15;UBERON:0004733,8.44e-11,12;UBERON:0002028,8.44e-11,12;UBERON:0007277,8.44e-11,12;UBERON:0000025,3.01e-10,192;UBERON:0004732,1.09e-09,13;UBERON:0000922,1.40e-09,592;UBERON:0000119,9.89e-09,309;UBERON:0002680,1.26e-08,9;UBERON:0001895,1.26e-08,9;UBERON:0010092,1.26e-08,9;UBERON:0001871,3.57e-08,6;UBERON:0002050,3.66e-08,564;UBERON:0000923,4.04e-08,560;UBERON:0010316,4.04e-08,560;UBERON:0005291,4.04e-08,560;UBERON:0006598,4.04e-08,560;UBERON:0010317,4.04e-08,560;UBERON:0002532,4.04e-08,560;UBERON:0000483,6.37e-08,306;UBERON:0005423,1.15e-07,581;UBERON:0000200,1.17e-07,6;UBERON:0004111,1.37e-07,240;UBERON:0001894,2.00e-07,7;UBERON:0006222,2.00e-07,7;UBERON:0001872,7.97e-07,5 | |||
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| ||
|short_description=p1@TMEM108 | |||
}} | }} |
Latest revision as of 20:48, 24 September 2015
Short description: | p1@TMEM108 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TMEM108_5end |
Coexpression cluster: | C4284_neuroblastoma_occipital_duodenum_temporal_brain_parietal_Neural |
Association with transcript: | 0bp_to_ENST00000321871, ENST00000393130, ENST00000514529_5end |
EntrezGene: | TMEM108 |
HGNC: | 28451 |
UniProt: | Q6UXF1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.19e-11 | 25 |
neurectodermal cell | 6.19e-10 | 59 |
neuronal stem cell | 3.56e-09 | 8 |
oligodendrocyte | 2.27e-07 | 7 |
macroglial cell | 2.27e-07 | 7 |
astrocyte | 2.27e-07 | 7 |
oligodendrocyte precursor cell | 2.27e-07 | 7 |
neuron | 6.71e-07 | 6 |
neuroblast | 6.71e-07 | 6 |
electrically signaling cell | 6.71e-07 | 6 |