FFCP PHASE1:Hg19::chr4:91048537..91048552,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:91048537..91048552,+
|short_description=p3@FAM190A
|description=CAGE_peak_3_at_FAM190A_5end
|association_with_transcript=-131bp_to_NM_001145065,uc003hsu.3,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=401145 | |EntrezGene=401145 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29349 | |HGNC=29349 | ||
|TSSclassifier=strong | |||
|UniProt=Q9C0I3 | |UniProt=Q9C0I3 | ||
|association_with_transcript=-131bp_to_NM_001145065,uc003hsu.3,uc003hsv.3,uc010ikv.2_5end | |||
|cluster_id=chr4:91048537..91048552,+ | |||
|description=CAGE_peak_3_at_FAM190A_5end | |||
|id=chr4:91048537..91048552,+ | |||
|ontology_enrichment_celltype=CL:0000860!1.06e-23!45;CL:0002057!1.18e-23!42;CL:0000557!9.03e-17!71;CL:0000839!3.08e-16!70;CL:0002009!1.23e-15!65;CL:0002194!1.37e-14!63;CL:0000576!1.37e-14!63;CL:0000040!1.37e-14!63;CL:0000559!1.37e-14!63;CL:0000766!3.33e-14!76;CL:0000763!8.63e-12!112;CL:0000049!8.63e-12!112;CL:0000738!3.78e-10!140;CL:0002031!9.66e-10!124;CL:0000037!1.13e-08!172;CL:0000566!1.13e-08!172;CL:0002087!3.48e-08!119;CL:0002032!1.45e-07!165;CL:0000837!1.45e-07!165;CL:0000988!1.92e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.68e-26;33!CL:0002057;3.68e-26;33!CL:0000473;3.92e-18;39!CL:0000234;3.92e-18;39!CL:0000576;4.57e-16;48!CL:0000766;1.56e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.20e-30,42;CL:0002057,4.20e-30,42;CL:0000473,8.72e-26,48;CL:0000234,8.72e-26,48;CL:0000557,3.42e-21,67;CL:0002009,1.74e-20,61;CL:0000839,3.74e-19,66;CL:0002194,6.00e-19,59;CL:0000576,6.00e-19,59;CL:0000040,6.00e-19,59;CL:0000559,6.00e-19,59;CL:0000766,3.25e-17,72;CL:0000763,8.08e-13,108;CL:0000049,8.08e-13,108;CL:0000738,8.86e-13,136;CL:0002031,3.11e-12,120;CL:0002087,2.14e-11,115;CL:0000037,3.81e-10,168;CL:0002032,7.88e-09,161;CL:0000837,7.88e-09,161;CL:0000988,9.63e-09,177 | |||
|ontology_enrichment_development_v019=CL:0002057;3.81e-22;42!UBERON:0006601;1.07e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.65e-26!57;UBERON:0005068!2.65e-26!57;UBERON:0006241!2.65e-26!57;UBERON:0007135!2.65e-26!57;UBERON:0007023!1.93e-25!115;UBERON:0001017!2.03e-23!82;UBERON:0005743!6.76e-22!86;UBERON:0003080!7.83e-21!42;UBERON:0000073!1.06e-20!94;UBERON:0001016!1.06e-20!94;UBERON:0002616!1.35e-20!59;UBERON:0002780!2.10e-20!41;UBERON:0001890!2.10e-20!41;UBERON:0006240!2.10e-20!41;UBERON:0000955!2.23e-18!69;UBERON:0006238!2.23e-18!69;UBERON:0002020!2.84e-17!34;UBERON:0003528!2.84e-17!34;UBERON:0001869!4.40e-17!32;UBERON:0001893!1.10e-16!34;UBERON:0002619!3.49e-16!22;UBERON:0002791!4.05e-16!33;UBERON:0003075!7.31e-16!86;UBERON:0007284!7.31e-16!86;UBERON:0002346!7.07e-15!90;UBERON:0001950!1.01e-14!20;UBERON:0000956!2.33e-14!25;UBERON:0000203!2.33e-14!25;UBERON:0002371!2.94e-13!80;UBERON:0003056!4.72e-12!61;UBERON:0001474!1.44e-11!86;UBERON:0002390!1.92e-11!102;UBERON:0003061!1.92e-11!102;UBERON:0002193!4.99e-10!112;UBERON:0004121!1.17e-09!169;UBERON:0000062!1.54e-09!511;UBERON:0000924!2.88e-09!173;UBERON:0006601!2.88e-09!173;UBERON:0002405!4.38e-08!115;UBERON:0000153!1.21e-07!129;UBERON:0007811!1.21e-07!129;UBERON:0000033!1.53e-07!123;UBERON:0004765!1.71e-07!101;UBERON:0001434!1.71e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.98e-23;22!UBERON:0001869;2.84e-21;32!UBERON:0001950;3.08e-21;20!UBERON:0003528;4.78e-20;34!UBERON:0002020;4.78e-20;34!UBERON:0002791;1.05e-19;32!UBERON:0000956;1.09e-19;25!UBERON:0000203;1.09e-19;25!UBERON:0001893;1.34e-18;34!UBERON:0002780;5.54e-18;41!UBERON:0001890;5.54e-18;41!UBERON:0000073;1.67e-16;53!UBERON:0002616;1.67e-16;53!UBERON:0000955;1.23e-11;68!UBERON:0001017;1.53e-11;75!UBERON:0001016;6.31e-10;83!UBERON:0001871;1.31e-07;6!UBERON:0000200;2.27e-07;6!UBERON:0002021;9.53e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,7.06e-32,56;UBERON:0005068,7.06e-32,56;UBERON:0006241,7.06e-32,56;UBERON:0007135,7.06e-32,56;UBERON:0000073,1.23e-29,53;UBERON:0002616,1.23e-29,53;UBERON:0001017,2.70e-28,81;UBERON:0001016,3.30e-27,89;UBERON:0002780,5.19e-25,41;UBERON:0001890,5.19e-25,41;UBERON:0003080,5.19e-25,41;UBERON:0006240,5.19e-25,41;UBERON:0000955,5.84e-24,68;UBERON:0006238,5.84e-24,68;UBERON:0001869,7.85e-24,32;UBERON:0002619,1.81e-23,22;UBERON:0003528,2.54e-23,34;UBERON:0002020,2.54e-23,34;UBERON:0002791,5.89e-22,32;UBERON:0001893,7.93e-22,34;UBERON:0001950,2.84e-21,20;UBERON:0000956,1.00e-19,25;UBERON:0000203,1.00e-19,25;UBERON:0007023,2.30e-19,114;UBERON:0003075,2.62e-19,82;UBERON:0007284,2.62e-19,82;UBERON:0002371,4.62e-18,76;UBERON:0002346,1.19e-17,86;UBERON:0001474,1.21e-15,82;UBERON:0003056,1.15e-14,61;UBERON:0010371,3.64e-14,104;UBERON:0002390,3.99e-14,98;UBERON:0003061,3.99e-14,98;UBERON:0002405,1.52e-13,93;UBERON:0004765,5.66e-13,90;UBERON:0011216,1.88e-11,223;UBERON:0002193,2.01e-11,108;UBERON:0001434,4.89e-11,100;UBERON:0004121,9.03e-11,171;UBERON:0000924,9.03e-11,171;UBERON:0006601,9.03e-11,171;UBERON:0003076,4.91e-08,15;UBERON:0003057,4.91e-08,15;UBERON:0001871,9.51e-08,6;UBERON:0010314,1.88e-07,132;UBERON:0000200,2.35e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,1.09220686065086,0.527533956456907,0,0,0,0,0,0,0.492484232307152,0,0.313454721478088,0,0.136874425072884,0.125542639594803,0,0,0,0.393364276848904,0,1.23852898652861,0,0,0,0,0,5.28480790802725,3.32397245119126,1.80490002723128,1.08505435357926,0,0,0.515151135268373,4.36194716338694,1.51150377475524,3.63876091781724,3.71886459049095,3.28934310417461,8.05236564327269,5.46615545412086,9.99026755463492,6.62150243688039,4.48169384957604,7.74581620300591,4.06279459783025,2.07066573496865,5.73102915121476,4.49446968890169,3.06083892370903,3.85114832491312,5.75403413219137,7.58657990429447,11.5688921420546,9.80316926225197,4.35313857942876,9.07816359505824,7.4738669879469,6.53246529667532,7.82224377630302,13.031330682307,4.23779651843358,9.94349617166425,10.1267963981083,2.11255286311942,1.91343869968539,1.88692780957538,1.23561494261145,0.450530678524519,0.64290234678832,0.570025487482497,1.39241674039363,0.547992461293902,0,1.09227722252426,2.66852776159066,2.56038133539904,2.40237592221607,2.29900975981793,0.661044872784862,0.954053754535364,5.69212969109448,5.87237189370939,3.82273228125229,1.32171328579026,2.24203425192614,1.31692042387539,0.393419540227666,0,2.67281948699362,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0.150575119077773,0.255973222308837,0,0.473554504088034,0,0,0,0.434473211648397,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,1.24430121722827,0,0,0,0.348259474598534,0.26591592103773,2.38490624305342,0.571994910780128,2.22874500797739,0,0,0,0,0,0.550236083880135,0.626984899610432,0.516833518338658,0,0.33472061276467,0,0,0,0,0,0.535798369704479,0.22452937262617,0.900891843866578,0,0,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.232387885739037,0.310983165046111,1.00928340350251,0,0,0,0,0,0,0.118306800039844,0,0,0.441175890929576,0.217879444092406,0.71181185733329,0.269662616320329,0.392442930250692,1.15424147083917,0,0,0,0,1.26755034821831,0,1.18157981336281,0,0.122988438543114,0,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,0,1.44331342025273,0.231860809950154,0.234817388471643,0,0,0,5.53143078571493,5.15091697256924,0,0,0,0,0,0,0,0,0.383382679165211,0.492663237895943,0.264145302039678,4.76854665743776,4.4677185559258,4.16600030307054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,0,0,0,0,0,0,0,0,1.18218456121156,0.431255149719035,0.77005821767849,0.254094624222463,5.20559415430487,3.09315525111078,5.52803675603351,10.2070200264506,0,0,0.828831026872071,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0.184369168541703,0,0,0,1.03384013061444,1.50999940573032,2.02782359826544,3.94065842880137,0,0.907170879989041,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.276242966807689,0,0,0,0,0.0770153371044148,0.784349769176855,0,0,0,0,0,1.54227252690289,0,0,0.254876273045038,0,0.447749509444357,0.219259876645935,0.261435451024901,0,0,0,0.9273691048295,0.0915694648183434,0.247528499761764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50578890427775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,2.45695363593188,5.77487913158015,0.245040215981032,0,0,0,0,0.798317485731266,0.957526850661834,2.96343015813436,0.973865820823666,0.842391534340376,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0,0,1.23087398947712,0,0,0,3.92995134857262,2.3441308683503,0,0,0.284136146806413,1.67121139316383,0.296964680832639,0.614321404198464,2.98244294329889,3.51673541026282,0.556543525114529,0,0.211125408127993,0.996239941255349,1.10513566212459,3.77899121781414,0,0,0,0.0898683511473268,0.537063524026827,0,1.479651084554,0,0,1.93866549219044,1.39152147242777,15.9691038400955,0.520855522170466,1.66173999992772,2.17499872630438,0.1137934482855,1.77977555204936,0,11.0317879437269,1.74962768029953,3.99337488346572,1.77148277162768,2.41192877250816,13.7323562685375,22.1158519862449,9.16197618755997,1.97446857438575,0.762569244632931,0.975966209950223,1.07730361905316,0,4.15015027898508,0.718061155278177,1.52106320690811,3.19001159731919,0.549585560411174,1.5991043280559,0,0.627921025580099,1.32969345520125,0,0,0,0,4.76809736941136,0.421996129056054,3.59112177950125,0,0.432777279484182,2.98578579323551,1.32686346755009,2.4441205797345,0.593042257361244,0.123563938946503,0.104421949505455,0.134802265961354,0.802577647298789,0.937057782901357,0,0.391329237864179,0,1.57833761139756,2.41981432097328,18.3643656978294,0.31593289814244,1.50323419414493,0.414752765588989,0,0,0.941798755221676,1.19472429772959,0.284609546029793,0,0.347119476670262,0,0,0.17472666824203,0,0.387025325156341,0.511625219603299,0.985385484638511,0.193978032976839,0,0.90392296312213,0,0,2.91229661397042,0.391102765469606,0.721429382263803,0.85381197895741,0.599428828746391,0,4.12331746197296,0,0,0.248505071130865,0,0,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| ||
|short_description=p3@FAM190A | |||
}} | }} |
Latest revision as of 09:09, 19 September 2015
Short description: | p3@FAM190A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FAM190A_5end |
Coexpression cluster: | NA |
Association with transcript: | -131bp_to_NM_001145065, uc003hsu.3, uc003hsv.3, uc010ikv.2_5end |
EntrezGene: | FAM190A |
HGNC: | 29349 |
UniProt: | Q9C0I3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.20e-30 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.20e-30 | 42 |
defensive cell | 8.72e-26 | 48 |
phagocyte | 8.72e-26 | 48 |
granulocyte monocyte progenitor cell | 3.42e-21 | 67 |
macrophage dendritic cell progenitor | 1.74e-20 | 61 |
myeloid lineage restricted progenitor cell | 3.74e-19 | 66 |
monopoietic cell | 6.00e-19 | 59 |
monocyte | 6.00e-19 | 59 |
monoblast | 6.00e-19 | 59 |
promonocyte | 6.00e-19 | 59 |
myeloid leukocyte | 3.25e-17 | 72 |
myeloid cell | 8.08e-13 | 108 |
common myeloid progenitor | 8.08e-13 | 108 |
leukocyte | 8.86e-13 | 136 |
hematopoietic lineage restricted progenitor cell | 3.11e-12 | 120 |
nongranular leukocyte | 2.14e-11 | 115 |
hematopoietic stem cell | 3.81e-10 | 168 |
hematopoietic oligopotent progenitor cell | 7.88e-09 | 161 |
hematopoietic multipotent progenitor cell | 7.88e-09 | 161 |
hematopoietic cell | 9.63e-09 | 177 |