FFCP PHASE1:Hg19::chr5:110559941..110559952,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:110559941..110559952,+
|short_description=p4@CAMK4
|description=CAGE_peak_4_at_CAMK4_5end
|association_with_transcript=0bp_to_NM_001744_5end
|EntrezGene=8...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=814 | |EntrezGene=814 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1464 | |HGNC=1464 | ||
|TSSclassifier=strong | |||
|UniProt=Q16566 | |UniProt=Q16566 | ||
|association_with_transcript=0bp_to_NM_001744_5end | |||
|cluster_id=chr5:110559941..110559952,+ | |||
|coexpression_cluster_id=C118 | |||
|description=CAGE_peak_4_at_CAMK4_5end | |||
|id=chr5:110559941..110559952,+ | |||
|ontology_enrichment_celltype=CL:0000084!4.20e-19!25;CL:0000827!4.20e-19!25;CL:0000542!3.36e-17!53;CL:0000051!3.36e-17!53;CL:0000838!1.03e-16!52;CL:0000791!6.28e-15!18;CL:0000789!6.28e-15!18;CL:0002420!6.28e-15!18;CL:0002419!6.28e-15!18;CL:0000790!6.28e-15!18;CL:0000625!2.14e-10!11;CL:0000624!1.90e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.39e-25;18!CL:0000789;1.39e-25;18!CL:0002419;1.39e-25;18!CL:0000084;9.58e-25;25!CL:0000625;5.95e-16;11!CL:0000624;2.85e-13;6!CL:0000542;2.90e-08;53!CL:0000898;2.34e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,7.35e-26,18;CL:0000789,7.35e-26,18;CL:0002420,7.35e-26,18;CL:0002419,7.35e-26,18;CL:0000790,7.35e-26,18;CL:0000084,6.24e-25,25;CL:0000827,6.24e-25,25;CL:0000625,3.53e-16,11;CL:0000838,3.79e-14,52;CL:0000542,9.17e-14,53;CL:0000051,9.17e-14,53;CL:0000624,2.50e-13,6;CL:0000898,2.02e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;1.39e-25;18!UBERON:0006215;2.80e-08;3!CL:0000051;2.90e-08;53!UBERON:0006601;3.39e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.75e-31!57;UBERON:0005068!1.75e-31!57;UBERON:0006241!1.75e-31!57;UBERON:0007135!1.75e-31!57;UBERON:0001017!7.52e-30!82;UBERON:0002780!8.55e-29!41;UBERON:0001890!8.55e-29!41;UBERON:0006240!8.55e-29!41;UBERON:0002616!1.45e-28!59;UBERON:0005743!1.93e-28!86;UBERON:0000955!3.52e-28!69;UBERON:0006238!3.52e-28!69;UBERON:0000073!4.79e-28!94;UBERON:0001016!4.79e-28!94;UBERON:0003080!9.42e-28!42;UBERON:0007023!1.59e-27!115;UBERON:0001869!2.14e-25!32;UBERON:0001893!7.92e-25!34;UBERON:0002020!2.18e-24!34;UBERON:0003528!2.18e-24!34;UBERON:0002791!8.03e-24!33;UBERON:0003075!2.52e-23!86;UBERON:0007284!2.52e-23!86;UBERON:0003056!4.92e-22!61;UBERON:0002346!2.27e-21!90;UBERON:0002619!1.58e-20!22;UBERON:0001950!5.76e-19!20;UBERON:0000956!2.26e-18!25;UBERON:0000203!2.26e-18!25;UBERON:0000153!3.49e-16!129;UBERON:0007811!3.49e-16!129;UBERON:0000033!1.16e-14!123;UBERON:0004121!9.79e-13!169;UBERON:0000924!6.26e-12!173;UBERON:0006601!6.26e-12!173;UBERON:0001871!5.18e-09!7;UBERON:0002420!3.15e-08!9;UBERON:0007245!3.15e-08!9;UBERON:0010009!3.15e-08!9;UBERON:0010011!3.15e-08!9;UBERON:0000454!3.15e-08!9;UBERON:0002308!1.88e-07!9;UBERON:0000125!1.88e-07!9;UBERON:0000200!3.17e-07!6;UBERON:0000178!7.38e-07!15;UBERON:0000179!7.38e-07!15;UBERON:0000463!7.38e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.16e-44;32!UBERON:0002791;3.35e-41;32!UBERON:0002619;3.52e-40;22!UBERON:0001893;4.47e-39;34!UBERON:0001950;6.34e-37;20!UBERON:0003528;8.66e-37;34!UBERON:0002020;8.66e-37;34!UBERON:0002780;1.28e-36;41!UBERON:0001890;1.28e-36;41!UBERON:0000956;9.59e-35;25!UBERON:0000203;9.59e-35;25!UBERON:0000073;4.12e-27;53!UBERON:0002616;4.12e-27;53!UBERON:0000955;1.76e-19;68!UBERON:0001017;9.04e-18;75!UBERON:0002420;2.00e-15;9!UBERON:0007245;2.00e-15;9!UBERON:0010009;2.00e-15;9!UBERON:0010011;2.00e-15;9!UBERON:0000454;2.00e-15;9!UBERON:0001016;6.69e-15;83!UBERON:0001871;9.60e-15;6!UBERON:0000200;9.43e-13;6!UBERON:0009663;1.03e-11;7!UBERON:0002021;2.09e-11;5!UBERON:0000349;9.59e-11;5!UBERON:0000369;2.39e-10;4!UBERON:0002435;2.39e-10;4!UBERON:0000204;2.39e-10;4!UBERON:0000125;6.80e-09;9!UBERON:0002308;6.80e-09;9!UBERON:0002784;1.24e-08;4!UBERON:0007023;1.29e-08;114!UBERON:0005383;3.43e-08;3!UBERON:0005382;3.43e-08;3!UBERON:0001894;1.56e-07;7!UBERON:0001872;5.16e-07;5!UBERON:0001870;5.90e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.53e-52,53;UBERON:0002616,8.53e-52,53;UBERON:0002780,1.07e-51,41;UBERON:0001890,1.07e-51,41;UBERON:0003080,1.07e-51,41;UBERON:0006240,1.07e-51,41;UBERON:0001869,7.65e-49,32;UBERON:0001049,2.06e-48,56;UBERON:0005068,2.06e-48,56;UBERON:0006241,2.06e-48,56;UBERON:0007135,2.06e-48,56;UBERON:0001893,1.64e-45,34;UBERON:0002791,4.20e-45,32;UBERON:0003528,5.24e-42,34;UBERON:0002020,5.24e-42,34;UBERON:0000955,6.92e-42,68;UBERON:0006238,6.92e-42,68;UBERON:0002619,3.64e-40,22;UBERON:0001016,2.40e-39,89;UBERON:0001017,3.81e-39,81;UBERON:0001950,5.06e-37,20;UBERON:0003056,1.74e-35,61;UBERON:0000956,9.90e-35,25;UBERON:0000203,9.90e-35,25;UBERON:0003075,9.37e-33,82;UBERON:0007284,9.37e-33,82;UBERON:0002346,1.13e-30,86;UBERON:0007023,9.60e-25,114;UBERON:0010371,2.62e-23,104;UBERON:0010314,6.03e-17,132;UBERON:0004121,4.30e-16,171;UBERON:0000924,4.30e-16,171;UBERON:0006601,4.30e-16,171;UBERON:0002420,1.85e-15,9;UBERON:0007245,1.85e-15,9;UBERON:0010009,1.85e-15,9;UBERON:0010011,1.85e-15,9;UBERON:0000454,1.85e-15,9;UBERON:0001871,1.11e-14,6;UBERON:0000200,6.88e-13,6;UBERON:0009663,9.69e-12,7;UBERON:0011216,1.59e-11,223;UBERON:0002021,2.04e-11,5;UBERON:0000349,1.24e-10,5;UBERON:0000369,2.40e-10,4;UBERON:0002435,2.40e-10,4;UBERON:0000204,2.40e-10,4;UBERON:0010082,2.40e-10,4;UBERON:0000125,6.51e-09,9;UBERON:0002308,6.51e-09,9;UBERON:0002784,9.38e-09,4;UBERON:0005383,3.45e-08,3;UBERON:0005382,3.45e-08,3;UBERON:0001894,1.28e-07,7;UBERON:0006222,1.28e-07,7;UBERON:0001870,4.52e-07,3;UBERON:0001872,4.77e-07,5 | |||
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| ||
|short_description=p4@CAMK4 | |||
}} | }} |
Latest revision as of 17:08, 19 September 2015
Short description: | p4@CAMK4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CAMK4_5end |
Coexpression cluster: | C118_cerebellum_parietal_occipital_medial_middle_frontal_insula |
Association with transcript: | 0bp_to_NM_001744_5end |
EntrezGene: | CAMK4 |
HGNC: | 1464 |
UniProt: | Q16566 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 7.35e-26 | 18 |
alpha-beta T cell | 7.35e-26 | 18 |
immature T cell | 7.35e-26 | 18 |
mature T cell | 7.35e-26 | 18 |
immature alpha-beta T cell | 7.35e-26 | 18 |
T cell | 6.24e-25 | 25 |
pro-T cell | 6.24e-25 | 25 |
CD8-positive, alpha-beta T cell | 3.53e-16 | 11 |
lymphoid lineage restricted progenitor cell | 3.79e-14 | 52 |
lymphocyte | 9.17e-14 | 53 |
common lymphoid progenitor | 9.17e-14 | 53 |
CD4-positive, alpha-beta T cell | 2.50e-13 | 6 |
naive T cell | 2.02e-07 | 3 |