FFCP PHASE1:Hg19::chr5:112073544..112073596,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:112073544..112073596,+
|short_description=p1@APC
|description=CAGE_peak_1_at_APC_5end
|association_with_transcript=0bp_to_ENST00000257430,ENST00000508376,E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=324 | |EntrezGene=324 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=583 | |HGNC=583 | ||
|TSSclassifier=strong | |||
|UniProt=P25054,E7EMH9,Q4LE70 | |UniProt=P25054,E7EMH9,Q4LE70 | ||
|association_with_transcript=0bp_to_ENST00000257430,ENST00000508376,ENST00000508624,NM_000038,NM_001127510,uc003kpy.3,uc003kpz.3,uc010jbz.2_5end | |||
|cluster_id=chr5:112073544..112073596,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_APC_5end | |||
|id=chr5:112073544..112073596,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.79e-08!180 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.42e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.49e-37!94;UBERON:0001016!2.49e-37!94;UBERON:0005743!6.88e-36!86;UBERON:0001017!8.85e-36!82;UBERON:0000955!1.03e-30!69;UBERON:0006238!1.03e-30!69;UBERON:0001049!3.16e-29!57;UBERON:0005068!3.16e-29!57;UBERON:0006241!3.16e-29!57;UBERON:0007135!3.16e-29!57;UBERON:0002616!9.89e-28!59;UBERON:0002780!3.84e-25!41;UBERON:0001890!3.84e-25!41;UBERON:0006240!3.84e-25!41;UBERON:0003080!1.25e-24!42;UBERON:0004121!1.44e-21!169;UBERON:0000033!2.60e-21!123;UBERON:0002020!3.08e-21!34;UBERON:0003528!3.08e-21!34;UBERON:0003075!3.29e-21!86;UBERON:0007284!3.29e-21!86;UBERON:0001893!4.02e-21!34;UBERON:0000924!8.85e-21!173;UBERON:0006601!8.85e-21!173;UBERON:0002791!1.67e-20!33;UBERON:0001869!5.13e-20!32;UBERON:0002346!7.13e-20!90;UBERON:0000153!7.75e-19!129;UBERON:0007811!7.75e-19!129;UBERON:0003056!4.60e-18!61;UBERON:0000956!8.84e-16!25;UBERON:0000203!8.84e-16!25;UBERON:0002619!1.30e-14!22;UBERON:0001950!2.89e-13!20;UBERON:0007023!4.60e-09!115;UBERON:0002420!5.37e-07!9;UBERON:0007245!5.37e-07!9;UBERON:0010009!5.37e-07!9;UBERON:0010011!5.37e-07!9;UBERON:0000454!5.37e-07!9;UBERON:0002308!6.38e-07!9;UBERON:0000125!6.38e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.56e-18;34!UBERON:0003528;1.61e-18;34!UBERON:0002020;1.61e-18;34!UBERON:0001869;2.26e-18;32!UBERON:0002791;2.48e-18;32!UBERON:0002780;2.51e-18;41!UBERON:0001890;2.51e-18;41!UBERON:0000073;6.64e-17;53!UBERON:0002616;6.64e-17;53!UBERON:0000956;5.57e-16;25!UBERON:0000203;5.57e-16;25!UBERON:0001017;7.38e-15;75!UBERON:0002619;8.35e-15;22!UBERON:0000955;2.30e-14;68!UBERON:0001950;1.94e-13;20!UBERON:0001016;2.13e-13;83!UBERON:0002420;4.54e-07;9!UBERON:0007245;4.54e-07;9!UBERON:0010009;4.54e-07;9!UBERON:0010011;4.54e-07;9!UBERON:0000454;4.54e-07;9!UBERON:0000125;5.42e-07;9!UBERON:0002308;5.42e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,8.20e-38,89;UBERON:0001017,1.89e-36,81;UBERON:0000955,2.39e-31,68;UBERON:0006238,2.39e-31,68;UBERON:0001049,6.41e-30,56;UBERON:0005068,6.41e-30,56;UBERON:0006241,6.41e-30,56;UBERON:0007135,6.41e-30,56;UBERON:0000073,4.66e-28,53;UBERON:0002616,4.66e-28,53;UBERON:0002780,2.38e-25,41;UBERON:0001890,2.38e-25,41;UBERON:0003080,2.38e-25,41;UBERON:0006240,2.38e-25,41;UBERON:0003075,1.73e-22,82;UBERON:0007284,1.73e-22,82;UBERON:0004121,7.69e-22,171;UBERON:0000924,7.69e-22,171;UBERON:0006601,7.69e-22,171;UBERON:0003528,2.07e-21,34;UBERON:0002020,2.07e-21,34;UBERON:0001893,2.71e-21,34;UBERON:0002346,5.00e-21,86;UBERON:0010314,2.50e-20,132;UBERON:0001869,3.53e-20,32;UBERON:0002791,3.94e-20,32;UBERON:0003056,6.88e-19,61;UBERON:0010371,1.30e-18,104;UBERON:0000956,6.63e-16,25;UBERON:0000203,6.63e-16,25;UBERON:0002619,9.98e-15,22;UBERON:0001950,2.28e-13,20;UBERON:0011216,4.32e-10,223;UBERON:0007023,7.00e-09,114;UBERON:0002420,4.81e-07,9;UBERON:0007245,4.81e-07,9;UBERON:0010009,4.81e-07,9;UBERON:0010011,4.81e-07,9;UBERON:0000454,4.81e-07,9;UBERON:0000125,5.72e-07,9;UBERON:0002308,5.72e-07,9 | |||
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| ||
|short_description=p1@APC | |||
}} | }} |
Latest revision as of 18:08, 19 September 2015
Short description: | p1@APC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_APC_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000257430, ENST00000508376, ENST00000508624, NM_000038, NM_001127510, uc003kpy.3, uc003kpz.3, uc010jbz.2_5end |
EntrezGene: | APC |
HGNC: | 583 |
UniProt: | P25054E7EMH9Q4LE70 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data