FFCP PHASE1:Hg19::chr8:119202179..119202185,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:119202179..119202185,-
|short_description=p2@SAMD12
|description=CAGE_peak_2_at_SAMD12_5end
|association_with_transcript=-62bp_to_EF212289_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=401474 | |EntrezGene=401474 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=31750 | |HGNC=31750 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-62bp_to_EF212289_5end | |||
|cluster_id=chr8:119202179..119202185,- | |||
|description=CAGE_peak_2_at_SAMD12_5end | |||
|id=chr8:119202179..119202185,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.31e-08;82 | |||
|ontology_enrichment_disease=DOID:305!2.46e-11!106;DOID:0050687!6.23e-10!143;DOID:14566!6.95e-07!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.47e-08,106;DOID:0050687,6.67e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0001049!4.95e-24!57;UBERON:0005068!4.95e-24!57;UBERON:0006241!4.95e-24!57;UBERON:0007135!4.95e-24!57;UBERON:0005743!5.93e-23!86;UBERON:0001017!6.62e-23!82;UBERON:0000073!1.36e-22!94;UBERON:0001016!1.36e-22!94;UBERON:0007023!5.93e-22!115;UBERON:0000955!1.61e-21!69;UBERON:0006238!1.61e-21!69;UBERON:0003080!1.93e-20!42;UBERON:0002780!2.80e-20!41;UBERON:0001890!2.80e-20!41;UBERON:0006240!2.80e-20!41;UBERON:0002616!3.20e-20!59;UBERON:0003075!1.92e-18!86;UBERON:0007284!1.92e-18!86;UBERON:0002346!9.82e-18!90;UBERON:0002020!4.01e-17!34;UBERON:0003528!4.01e-17!34;UBERON:0001893!8.45e-17!34;UBERON:0002791!3.55e-16!33;UBERON:0001869!6.82e-16!32;UBERON:0003056!1.81e-15!61;UBERON:0002619!1.42e-13!22;UBERON:0000033!2.11e-13!123;UBERON:0000153!6.83e-13!129;UBERON:0007811!6.83e-13!129;UBERON:0001950!2.83e-12!20;UBERON:0000956!3.86e-12!25;UBERON:0000203!3.86e-12!25;UBERON:0004121!9.66e-11!169;UBERON:0000924!1.49e-10!173;UBERON:0006601!1.49e-10!173;UBERON:0000064!2.14e-08!219;UBERON:0005409!7.67e-08!35;UBERON:0000481!2.39e-07!347;UBERON:0002420!7.98e-07!9;UBERON:0007245!7.98e-07!9;UBERON:0010009!7.98e-07!9;UBERON:0010011!7.98e-07!9;UBERON:0000454!7.98e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;2.84e-23;34!UBERON:0002020;2.84e-23;34!UBERON:0002791;6.24e-23;32!UBERON:0001869;7.26e-23;32!UBERON:0002619;1.51e-22;22!UBERON:0002780;9.64e-22;41!UBERON:0001890;9.64e-22;41!UBERON:0001893;3.46e-21;34!UBERON:0001950;3.16e-20;20!UBERON:0000956;4.59e-19;25!UBERON:0000203;4.59e-19;25!UBERON:0000073;2.31e-18;53!UBERON:0002616;2.31e-18;53!UBERON:0001017;3.63e-13;75!UBERON:0000955;5.62e-12;68!UBERON:0001016;2.05e-11;83!UBERON:0002420;1.18e-10;9!UBERON:0007245;1.18e-10;9!UBERON:0010009;1.18e-10;9!UBERON:0010011;1.18e-10;9!UBERON:0000454;1.18e-10;9!UBERON:0000125;3.64e-10;9!UBERON:0002308;3.64e-10;9!UBERON:0000200;7.08e-09;6!UBERON:0009663;5.11e-08;7!UBERON:0007023;6.20e-08;114!UBERON:0000349;2.80e-07;5!UBERON:0001871;4.93e-07;6!UBERON:0002021;5.62e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.58e-38,56;UBERON:0005068,4.58e-38,56;UBERON:0006241,4.58e-38,56;UBERON:0007135,4.58e-38,56;UBERON:0000073,3.75e-35,53;UBERON:0002616,3.75e-35,53;UBERON:0002780,5.07e-31,41;UBERON:0001890,5.07e-31,41;UBERON:0003080,5.07e-31,41;UBERON:0006240,5.07e-31,41;UBERON:0001017,3.54e-30,81;UBERON:0000955,2.06e-29,68;UBERON:0006238,2.06e-29,68;UBERON:0001016,6.17e-29,89;UBERON:0003528,4.48e-28,34;UBERON:0002020,4.48e-28,34;UBERON:0003075,9.56e-28,82;UBERON:0007284,9.56e-28,82;UBERON:0002346,9.86e-27,86;UBERON:0001893,5.35e-26,34;UBERON:0002791,5.85e-26,32;UBERON:0001869,7.29e-26,32;UBERON:0003056,1.02e-22,61;UBERON:0002619,1.30e-22,22;UBERON:0007023,2.39e-22,114;UBERON:0011216,1.29e-20,223;UBERON:0001950,2.90e-20,20;UBERON:0010371,3.50e-19,104;UBERON:0000956,4.04e-19,25;UBERON:0000203,4.04e-19,25;UBERON:0010314,1.47e-17,132;UBERON:0004121,1.68e-12,171;UBERON:0000924,1.68e-12,171;UBERON:0006601,1.68e-12,171;UBERON:0002420,4.31e-11,9;UBERON:0007245,4.31e-11,9;UBERON:0010009,4.31e-11,9;UBERON:0010011,4.31e-11,9;UBERON:0000454,4.31e-11,9;UBERON:0000125,1.42e-10,9;UBERON:0002308,1.42e-10,9;UBERON:0004111,2.67e-10,240;UBERON:0000025,2.31e-09,192;UBERON:0000200,7.78e-09,6;UBERON:0009663,1.81e-08,7;UBERON:0003076,2.53e-08,15;UBERON:0003057,2.53e-08,15;UBERON:0000349,1.77e-07,5;UBERON:0002021,4.41e-07,5;UBERON:0001871,6.17e-07,6;UBERON:0000483,7.55e-07,306 | |||
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| ||
|short_description=p2@SAMD12 | |||
}} | }} |
Latest revision as of 20:14, 15 September 2015
Short description: | p2@SAMD12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SAMD12_5end |
Coexpression cluster: | NA |
Association with transcript: | -62bp_to_EF212289_5end |
EntrezGene: | SAMD12 |
HGNC: | 31750 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.47e-08 | 106 |
cell type cancer | 6.67e-07 | 143 |