FFCP PHASE1:Hg19::chr12:120806960..120806985,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4440 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7330 | |||
|TSSclassifier=strong | |||
|UniProt=O43347 | |||
|association_with_transcript=0bp_to_ENST00000257552_5end | |||
|cluster_id=chr12:120806960..120806985,- | |||
|coexpression_cluster_id=C3245 | |||
|description=CAGE_peak_2_at_MSI1_5end | |||
|id=chr12:120806960..120806985,- | |||
|ontology_enrichment_celltype=CL:0002319!7.42e-12!25;CL:0000133!6.19e-11!59;CL:0000047!6.95e-09!8;CL:0000128!3.13e-07!7;CL:0000126!3.13e-07!7;CL:0000127!3.13e-07!7;CL:0002453!3.13e-07!7;CL:0000221!3.62e-07!71;CL:0000540!6.10e-07!6;CL:0000031!6.10e-07!6;CL:0000404!6.10e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002319;5.97e-14;25!CL:0000540;4.23e-10;6!CL:0000404;4.23e-10;6!CL:0002322;5.75e-09;5!CL:0000128;1.26e-08;7!CL:0000126;1.26e-08;7!CL:0000127;1.26e-08;7!CL:0002321;4.08e-07;15!CL:0000039;9.63e-07;7!CL:0000586;9.63e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,7.86e-14,25;CL:0000047,4.48e-13,8;CL:0000133,7.24e-13,59;CL:0000540,4.97e-10,6;CL:0000031,4.97e-10,6;CL:0000404,4.97e-10,6;CL:0000221,3.98e-09,72;CL:0002322,5.93e-09,5;CL:0000128,1.28e-08,7;CL:0000126,1.28e-08,7;CL:0000127,1.28e-08,7;CL:0002453,1.28e-08,7;CL:0000039,9.79e-07,7;CL:0000586,9.79e-07,7 | |||
|ontology_enrichment_development_v019=CL:0000031;4.23e-10;6!UBERON:0006601;3.19e-08;82!CL:0000133;7.85e-07;59 | |||
|ontology_enrichment_disease=DOID:3095!2.49e-09!22;DOID:2994!2.49e-09!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;5.60e-08;22!DOID:2994;5.60e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,4.81e-08,22;DOID:2994,4.81e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.20e-46!94;UBERON:0001016!1.20e-46!94;UBERON:0005743!1.32e-46!86;UBERON:0001017!3.44e-43!82;UBERON:0002346!1.88e-36!90;UBERON:0003075!2.54e-36!86;UBERON:0007284!2.54e-36!86;UBERON:0001049!2.96e-34!57;UBERON:0005068!2.96e-34!57;UBERON:0006241!2.96e-34!57;UBERON:0007135!2.96e-34!57;UBERON:0000955!2.97e-33!69;UBERON:0006238!2.97e-33!69;UBERON:0002616!1.84e-29!59;UBERON:0000924!3.31e-29!173;UBERON:0006601!3.31e-29!173;UBERON:0003056!3.79e-29!61;UBERON:0004121!1.14e-28!169;UBERON:0000033!1.97e-26!123;UBERON:0002780!2.59e-26!41;UBERON:0001890!2.59e-26!41;UBERON:0006240!2.59e-26!41;UBERON:0003080!2.64e-25!42;UBERON:0000153!3.46e-25!129;UBERON:0007811!3.46e-25!129;UBERON:0001893!3.34e-22!34;UBERON:0002020!7.02e-22!34;UBERON:0003528!7.02e-22!34;UBERON:0002791!9.76e-22!33;UBERON:0001869!9.09e-21!32;UBERON:0007023!5.77e-17!115;UBERON:0000956!6.26e-17!25;UBERON:0000203!6.26e-17!25;UBERON:0002619!4.21e-14!22;UBERON:0001950!1.35e-12!20;UBERON:0000064!3.36e-12!219;UBERON:0000922!8.14e-12!612;UBERON:0000481!3.10e-11!347;UBERON:0000119!1.18e-10!312;UBERON:0000483!2.10e-10!309;UBERON:0000475!3.03e-10!365;UBERON:0003076!5.74e-10!15;UBERON:0003057!5.74e-10!15;UBERON:0002050!4.79e-09!605;UBERON:0005423!4.79e-09!605;UBERON:0000468!7.95e-09!659;UBERON:0000923!9.28e-09!604;UBERON:0005291!9.28e-09!604;UBERON:0006598!9.28e-09!604;UBERON:0002532!9.28e-09!604;UBERON:0000025!1.00e-08!194;UBERON:0004733!1.47e-08!12;UBERON:0002028!1.47e-08!12;UBERON:0007277!1.47e-08!12;UBERON:0000062!8.02e-08!511;UBERON:0004732!1.33e-07!13;UBERON:0000467!2.23e-07!625;UBERON:0000480!2.79e-07!626;UBERON:0000020!6.06e-07!23 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;5.36e-23;41!UBERON:0001890;5.36e-23;41!UBERON:0000073;2.90e-22;53!UBERON:0002616;2.90e-22;53!UBERON:0001893;7.18e-22;34!UBERON:0002791;1.89e-21;32!UBERON:0001869;2.69e-21;32!UBERON:0003528;1.61e-20;34!UBERON:0002020;1.61e-20;34!UBERON:0000956;2.77e-20;25!UBERON:0000203;2.77e-20;25!UBERON:0002619;4.14e-16;22!UBERON:0000955;4.26e-15;68!UBERON:0001017;1.80e-14;75!UBERON:0001950;7.04e-14;20!UBERON:0001016;1.18e-13;83!UBERON:0000922;2.15e-11;49!UBERON:0000970;1.00e-08;20!UBERON:0000020;1.37e-08;23!UBERON:0000966;3.67e-08;5!UBERON:0005388;3.67e-08;5!UBERON:0001802;3.67e-08;5!UBERON:0002104;3.73e-08;21!UBERON:0001032;4.40e-08;24!UBERON:0004456;4.40e-08;24!UBERON:0007625;6.55e-08;11!UBERON:0004733;1.19e-07;12!UBERON:0002028;1.19e-07;12!UBERON:0000019;1.33e-07;19!UBERON:0000047;1.33e-07;19!UBERON:0004088;1.33e-07;19!UBERON:0010230;1.33e-07;19!UBERON:0004732;6.43e-07;13!UBERON:0000200;9.85e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.39e-45,89;UBERON:0001017,6.38e-45,81;UBERON:0003075,1.53e-38,82;UBERON:0007284,1.53e-38,82;UBERON:0001049,1.19e-37,56;UBERON:0005068,1.19e-37,56;UBERON:0006241,1.19e-37,56;UBERON:0007135,1.19e-37,56;UBERON:0000073,1.12e-36,53;UBERON:0002616,1.12e-36,53;UBERON:0002346,6.38e-36,86;UBERON:0003056,4.40e-35,61;UBERON:0000955,1.90e-33,68;UBERON:0006238,1.90e-33,68;UBERON:0002780,3.36e-30,41;UBERON:0001890,3.36e-30,41;UBERON:0003080,3.36e-30,41;UBERON:0006240,3.36e-30,41;UBERON:0004121,1.03e-28,171;UBERON:0000924,1.03e-28,171;UBERON:0006601,1.03e-28,171;UBERON:0010371,8.55e-28,104;UBERON:0001893,1.58e-25,34;UBERON:0010314,5.00e-24,132;UBERON:0002791,1.08e-23,32;UBERON:0003528,1.57e-23,34;UBERON:0002020,1.57e-23,34;UBERON:0001869,2.27e-23,32;UBERON:0000956,1.11e-20,25;UBERON:0000203,1.11e-20,25;UBERON:0011216,1.69e-18,223;UBERON:0002619,1.77e-16,22;UBERON:0001950,3.09e-14,20;UBERON:0000922,7.79e-10,592;UBERON:0007023,7.53e-09,114;UBERON:0003076,1.21e-08,15;UBERON:0003057,1.21e-08,15;UBERON:0000025,1.52e-08,192;UBERON:0000483,4.14e-08,306;UBERON:0000970,4.60e-08,21;UBERON:0002104,4.60e-08,21;UBERON:0000020,5.34e-08,24;UBERON:0001032,5.34e-08,24;UBERON:0004456,5.34e-08,24;UBERON:0007625,6.80e-08,11;UBERON:0000119,7.45e-08,309;UBERON:0004733,1.07e-07,12;UBERON:0002028,1.07e-07,12;UBERON:0007277,1.07e-07,12;UBERON:0005423,2.13e-07,581;UBERON:0000019,5.32e-07,20;UBERON:0000047,5.32e-07,20;UBERON:0010312,5.32e-07,20;UBERON:0004088,5.32e-07,20;UBERON:0010230,5.32e-07,20;UBERON:0003072,5.32e-07,20;UBERON:0004128,5.32e-07,20;UBERON:0003071,5.32e-07,20;UBERON:0004732,5.83e-07,13;UBERON:0000200,9.15e-07,6;UBERON:0001871,9.79e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,1.72013755551056,3.48900583986214,0,0.263766978228454,0,0,0,0,0,0,8.86471618152873,2.24400760368678,11.9112794161673,36.9244423399063,19.9836660606411,40.5502725891213,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.12786256184353,0,0,0,0,0.486634870302636,9.35894689924272,3.1042115644759,5.62142628436007,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.908144565869588,0,0.234321431833797,0,0,0,0.587172493218824,0,0.140450806702248,0,0,0,0,0,0,0,0,1.00094815897571,0,0.438977620880838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.17223831068289,11.1325005390048,13.7108852586032,22.39078788332,6.81266297364197,7.2995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95172252503473,0,0,0,0,0,0.977424915930974,0,1.44331342025273,33.9676086576975,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0.102827492703324,0,0.285826432630578,0,0.87192013766656,0.07333828582095,0,0,0,0,0,0.514414748524284,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.4997720775703,26.0279707715243,19.3322203194424,10.2184921853953,10.2070200264506,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,1.03473071292505,0.664225598535437,0.553107505625109,0,0.195801157462741,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,3.2632051389738,0,0,0,0,0,2.70719767744447,1.00119938235739,1.56869953835371,0,0.844413031143006,0,0,0,0,0,1.00337954770971,0.254876273045038,0,0.671624264166535,0,0,4.35965212697862,3.28014645699706,2.60302715731442,0.103041011647722,0.640986253728404,0.990113999047056,0,0,0,0.96670718292122,0.154048617114644,0.15350367472613,0.275673144969061,0.107420244868274,0.145016693914229,1.36362603865761,0.979352392114111,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0,0,0,0.211107635297664,0,0,1.04980416073495,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,4.80708320073629,1.92495971052672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0.284136146806413,0,1.18785872333055,0,0.994147647766298,1.82870241333667,0,0,4.85588438694385,0,0,4.78672220923124,0.409074730008619,0,0,0,0,0,0.197286811273867,0,0,5.81599647657131,1.02044907978036,1.99613798001194,0.7812832832557,0,0,0,0,0,2.06846023944879,0.291604613383254,4.68787486319889,2.65722415744152,1.32656082487949,1.52581736317083,1.21637185924347,0.591095237907095,1.53569778007781,0,0,0.615602068030377,0,0.23056390438806,1.16684937732704,1.19512109114209,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41353071433941,4.760550074326,0,0.619202951523374,2.4441205797345,1.48260564340311,5.43681331364613,4.07245603071276,2.76344645220776,0,1.1713222286267,0,0.19566461893209,0.242780379534093,0.394584402849391,3.62972148145992,9.79432837217568,0.568679216656392,3.00646838828985,4.04383946449264,0.664653872707185,0.330991955875499,0,0,1.42304773014896,0.138674673013139,1.56203764501618,0,0,0.698906672968121,0,0,0,0,0,0.441280633457501,23.0500355596143,0,0,0.569797163602908,1.75996244461323,0,0,0.39961921916426,0,3.6651710773093,10.2956998717179,0,1.11827282008889,0.235694034616795,0.951329442515298,0.418411385249333,0,0.866851769704557,0.600420288709789,2.19048606227189,0,0,0,0.279282401272254,0,0,0.599037001496973,0.429226048136571,1.33902874465124,1.20930250476107,0,5.82479747637269,0.157566364614447,0.247247575143499,0.0674035438541849,0.295282444544246,0,3.18091875923721,3.54128855890097,5.62636019627567,5.22649859069488,4.15440338029185,0,0,1.15424157650247,0,0,2.8325477592899,0,0,0.191915197319445,1.42939065274673,0.662091970365432,0,0,0,0,0,0.082092520749339,0,0,0,3.97520666736664,0.646414781807753,1.19009341568421,0,0,0,0.471612915298998,0.414239055347196,0,0,0,0,0,0,0,0,2.19875734750328,1.77213635993397,1.09823638411767,1.3771002377715,2.86704597845036,1.55300672151593,1.4903136705932,23.1042220343505,0,0,0.285465333544967,0,0,1.1593682288866,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71553273099941,3.91491437947817,0,0,0,0.179088841081487,1.23520578864389,0,0,0.38582807654183,0,0.256241518587947,0,0,1.7973596699725,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,1.86623178009892,16.7541626407784,1.72519698234691,2.04445724412665,2.07498312564826,0.509197589862076,0.212574920101683,0.247871528518004,0.558644917973244,0,0,0,0.705351887381368,0,2.0553352030867,2.8339315265117,1.59633859057151,0.82046545696302,4.53729053199093,1.65977405914123,1.61475645631851,0,0,1.06172751012966,0,4.73655231216387,0,0,0,0.82731361184183,0.20170506870352,3.12605604493237,0,0,0,1.01306376927592,0,1.2401207790071,1.45856363445986,4.92277328116398,0.548257766857182,0,0,0.127762427639595,3.21421101526972,5.0442558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| |||
|short_description=p2@MSI1 | |||
}} |
Latest revision as of 20:12, 16 September 2015
Short description: | p2@MSI1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MSI1_5end |
Coexpression cluster: | C3245_Astrocyte_Lens_Neural_eye_medulloblastoma_neuroblastoma_small |
Association with transcript: | 0bp_to_ENST00000257552_5end |
EntrezGene: | MSI1 |
HGNC: | 7330 |
UniProt: | O43347 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 7.86e-14 | 25 |
neuronal stem cell | 4.48e-13 | 8 |
neurectodermal cell | 7.24e-13 | 59 |
neuron | 4.97e-10 | 6 |
neuroblast | 4.97e-10 | 6 |
electrically signaling cell | 4.97e-10 | 6 |
ectodermal cell | 3.98e-09 | 72 |
embryonic stem cell | 5.93e-09 | 5 |
oligodendrocyte | 1.28e-08 | 7 |
macroglial cell | 1.28e-08 | 7 |
astrocyte | 1.28e-08 | 7 |
oligodendrocyte precursor cell | 1.28e-08 | 7 |
germ line cell | 9.79e-07 | 7 |
germ cell | 9.79e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 4.81e-08 | 22 |
germ cell cancer | 4.81e-08 | 22 |