FFCP PHASE1:Hg19::chr17:30813724..30813758,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8851 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1775 | |||
|TSSclassifier=strong | |||
|UniProt=Q15078 | |||
|association_with_transcript=87bp_to_ENST00000313401_5end | |||
|cluster_id=chr17:30813724..30813758,+ | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_4_at_CDK5R1_5end | |||
|id=chr17:30813724..30813758,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,2.14e-08,8;CL:0000221,8.34e-07,72 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.23e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.32e-29!82;UBERON:0005743!7.23e-28!86;UBERON:0000073!3.08e-27!94;UBERON:0001016!3.08e-27!94;UBERON:0001049!6.96e-25!57;UBERON:0005068!6.96e-25!57;UBERON:0006241!6.96e-25!57;UBERON:0007135!6.96e-25!57;UBERON:0000955!3.54e-23!69;UBERON:0006238!3.54e-23!69;UBERON:0002780!4.59e-22!41;UBERON:0001890!4.59e-22!41;UBERON:0006240!4.59e-22!41;UBERON:0000924!8.25e-22!173;UBERON:0006601!8.25e-22!173;UBERON:0004121!5.16e-21!169;UBERON:0003080!6.01e-21!42;UBERON:0002616!4.68e-20!59;UBERON:0001893!1.19e-19!34;UBERON:0002020!2.24e-19!34;UBERON:0003528!2.24e-19!34;UBERON:0002791!5.64e-19!33;UBERON:0001869!8.75e-19!32;UBERON:0002346!3.08e-18!90;UBERON:0003075!1.62e-17!86;UBERON:0007284!1.62e-17!86;UBERON:0003056!6.02e-16!61;UBERON:0000956!2.92e-15!25;UBERON:0000203!2.92e-15!25;UBERON:0002619!5.72e-15!22;UBERON:0000153!1.37e-14!129;UBERON:0007811!1.37e-14!129;UBERON:0000033!4.95e-14!123;UBERON:0001950!1.20e-13!20;UBERON:0000064!9.83e-11!219;UBERON:0007023!2.92e-10!115;UBERON:0000483!9.97e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;7.85e-29;22!UBERON:0001893;2.36e-26;34!UBERON:0001950;3.11e-26;20!UBERON:0001869;3.77e-26;32!UBERON:0003528;8.69e-26;34!UBERON:0002020;8.69e-26;34!UBERON:0002791;1.14e-25;32!UBERON:0000956;1.61e-24;25!UBERON:0000203;1.61e-24;25!UBERON:0002780;3.91e-24;41!UBERON:0001890;3.91e-24;41!UBERON:0000073;7.73e-23;53!UBERON:0002616;7.73e-23;53!UBERON:0001017;7.14e-18;75!UBERON:0000955;1.06e-16;68!UBERON:0001016;2.80e-15;83!UBERON:0000200;1.83e-09;6!UBERON:0002420;1.76e-08;9!UBERON:0007245;1.76e-08;9!UBERON:0010009;1.76e-08;9!UBERON:0010011;1.76e-08;9!UBERON:0000454;1.76e-08;9!UBERON:0001872;2.75e-08;5!UBERON:0000349;4.93e-08;5!UBERON:0001871;4.98e-08;6!UBERON:0002021;5.22e-08;5!UBERON:0000125;1.02e-07;9!UBERON:0002308;1.02e-07;9!UBERON:0004732;1.88e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.92e-45,81;UBERON:0001016,1.80e-43,89;UBERON:0000073,4.22e-39,53;UBERON:0002616,4.22e-39,53;UBERON:0001049,3.16e-38,56;UBERON:0005068,3.16e-38,56;UBERON:0006241,3.16e-38,56;UBERON:0007135,3.16e-38,56;UBERON:0000955,3.24e-38,68;UBERON:0006238,3.24e-38,68;UBERON:0002780,6.51e-34,41;UBERON:0001890,6.51e-34,41;UBERON:0003080,6.51e-34,41;UBERON:0006240,6.51e-34,41;UBERON:0004121,2.06e-31,171;UBERON:0000924,2.06e-31,171;UBERON:0006601,2.06e-31,171;UBERON:0001893,2.07e-31,34;UBERON:0003528,6.43e-31,34;UBERON:0002020,6.43e-31,34;UBERON:0001869,1.07e-29,32;UBERON:0002791,3.88e-29,32;UBERON:0002619,7.73e-29,22;UBERON:0002346,1.54e-26,86;UBERON:0001950,3.11e-26,20;UBERON:0003075,4.62e-26,82;UBERON:0007284,4.62e-26,82;UBERON:0010371,7.34e-26,104;UBERON:0000956,1.58e-24,25;UBERON:0000203,1.58e-24,25;UBERON:0003056,4.70e-24,61;UBERON:0011216,1.90e-18,223;UBERON:0007023,1.50e-17,114;UBERON:0010314,1.54e-12,132;UBERON:0000200,1.86e-09,6;UBERON:0002420,1.38e-08,9;UBERON:0007245,1.38e-08,9;UBERON:0010009,1.38e-08,9;UBERON:0010011,1.38e-08,9;UBERON:0000454,1.38e-08,9;UBERON:0001872,2.86e-08,5;UBERON:0000349,4.70e-08,5;UBERON:0001871,4.97e-08,6;UBERON:0002021,5.26e-08,5;UBERON:0000025,7.49e-08,192;UBERON:0000125,7.51e-08,9;UBERON:0002308,7.51e-08,9;UBERON:0004732,1.24e-07,13;UBERON:0002298,7.11e-07,6 | |||
|phase1_expression=0.181678379270557,0,0.422863212287913,0,0,0.872338524100369,0,0.631719873426831,0.261185628199839,0.491467873003018,0,2.83973783769224,2.90143676051299,0.123766352960047,0.331397375727916,0,0,0.730310090387373,1.46379839637152,0.492484232307152,0.204000691244253,0,0.85870796139317,0.547497700291537,0.753255837568817,4.58480434487708,4.35133124084712,3.7781175030566,0.393364276848904,0,0.309632246632152,1.83884244895785,1.8072355126695,0.739508020333575,0.0774672005803016,0.284338464974843,0.293600439334847,0,0.200544447470142,0.434021741431704,0,0,0.257575567634187,0.145398238779565,0,0.242584061187816,0,0.411167888021826,0.309706370895104,0,0.256160706529101,0,0,0,0,0,0,0,0,0.320929027076094,0.639337125799041,0,0.199463657621632,0,0.290209238628584,0,0,0,0.521482918420201,0,0,0.368277635987565,0,0,0.425208599930087,0.209658645508376,0.112328631146495,0.300353785683013,0.48217676009124,0.570025487482497,0.19891667719909,0.365328307529268,0,0,0,0.426730222566507,0.400395987036012,0,0,0,6.26134266020393,12.3319809767897,7.26319133437935,1.32171328579026,0,0,0.786839080455332,1.57204305099666,0.616804496998528,0,0.977766799900771,0.946895611469467,0,0.111410456885174,0.589211814949674,0,0,0,0.130059347559878,0,0.276350017785848,0,0.444859689486181,0,0,0.339928028092699,0.766440987203842,0,0.253019692019503,0,0,0,0.150575119077773,0.127986611154418,0,0,0,1.20964045934839,0,0.579297615531196,0,0,0.255725123687061,0.361439152384566,0,0.144846518960824,0,0,0.189069634328136,0.665188192387692,0.087834785693126,2.0956652079634,2.5500670180478,1.11235332835329,0,0,0,1.43094374583205,2.28797964312051,0.74291500265913,0.39752481473341,0.860234595106124,0,0,0,0,0.417989933073621,0.258416759169329,0.71153252537342,0,0,0.760272105718513,0,0,0.81014194788176,0.17859945656816,0.22452937262617,0.450445921933289,0,0,0.183201743930407,2.63560834872127,0,2.18047026071267,0,0,0.132409180813219,0,0.354668382198357,0,0,0.24666754841716,0,0,0,0,0,0,0.624320153660641,0,0.149448680551801,0.117434498643765,0.485618833104395,0.561803226808994,0,0.368502951935304,0,0,0.247266929278557,0,0,0.168336113954066,0.250237039743928,0,0,0,0.150238058906597,0.453728732640084,0,0,0,0,0.206105058476878,0.257640540045629,0.18611685633159,0,0,0,0.0920498986422993,0,0.355009592516614,0,0,1.73934767846967,0.818238361772504,1.43402297694502,0.731842236777572,0.662648841607426,0.69716365721711,0.518305275076852,0.504641701751257,0.36497735907583,0,0,0,0.464367928031979,0,0.118306800039844,0,0,0,0,0,0,0,0.38474715694639,0.738155454624648,1.40241773803446,0.4115740113314,0,0,0,0,0,0,0,1.64625428112938,0,1.40740561376283,1.01847289674383,0.325808305310325,0,0,0.34779121492523,0.352226082707465,0.433099343283221,0,0.380508304469197,0,0,0,0,0,0,0.503946384596579,0.425325291727159,0.0895585227028483,0,0.383382679165211,0,0,0.207328115540772,0,0,6.1592957463404,9.16772221339866,11.7217447210047,6.84289784090821,5.96399457679276,3.90445975197093,8.00314011365619,0.672786506072164,0,0.1466765716419,0,0,0,0,1.04007436911366,0.514414748524284,2.83698264046557,0.532844358032199,0.142977993658148,0,0,0.325736184293735,0,0,0.904318131178758,0,0.399891964728228,0,0,0,0,0,0,0.723906533337896,0.821905290201534,0.895304816199478,1.2329365839288,0.788123040807709,0.646882724578552,0.77005821767849,5.33598710867173,37.7405576187103,35.571285387774,51.9300422536481,29.3451825760455,1.49801404789436,2.99161459204025,1.65766205374414,0.12269149171914,0,0.271265023699736,0,0,0,0,0,0,1.03473071292505,1.32845119707087,0.368738337083406,0,0,4.46086450954113,2.06768026122887,1.72571360654893,0.853820462427555,2.72814814301633,3.32870879020994,0.30239029332968,0,0.153461973288062,0,0,0,0,0,0,0.177561725313127,0.164254312027618,0,0.116210378459959,1.20859449591622,0.40101294060657,1.01289087829486,0.114814448164607,0,0.262248829918848,0.451199612907412,0.308061348417659,2.35304930753057,0,0.422206515571503,0,0.170093705276516,0,1.54227252690289,0.541892875087706,0.501689773854853,0.764628819135115,0,0.223874754722178,0,0,0,0.656029291399411,0,0.103041011647722,1.28197250745681,1.32015199872941,2.87132768998086,2.60024098414608,0,0.580024309752732,0.154048617114644,0.767518373630648,0.413509717453592,0,0,0.681813019328807,1.4245125703478,0.330569830721956,1.15314040419064,1.02090169995667,1.2138933702666,0,0,0.6970372701606,0,0.532306030317022,0,0,0.143124886741991,0,0.316379424718726,0,0.255897791311334,0,0.318203247925937,0,0,0,0.117812402345686,0,0,0.421258456238981,0,0.243713489631284,0,0,0,0,0.551365343546124,0,0.438450885253763,0,0.655894752046633,0.608731130888112,0.30982349809975,0,0.286822704408103,0.0982490410131212,1.426684205925,0,0,0,0,0,0.48111056362756,0,1.08890984861323,0,0.43050537267123,0,0.443430153536676,0.689170200620878,0,0.764637207142375,0.569647187174163,0.714695326373367,0,0.648473311192717,0,1.58625035258854,0.106824071127473,0,0,0.371606350251437,0.432807638929335,0.426851060090485,0.478278818186467,0,0,0,0.324621940274555,0,0.68470403709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| |||
|short_description=p4@CDK5R1 | |||
}} |
Latest revision as of 12:26, 19 September 2015
Short description: | p4@CDK5R1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CDK5R1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 87bp_to_ENST00000313401_5end |
EntrezGene: | CDK5R1 |
HGNC: | 1775 |
UniProt: | Q15078 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 2.14e-08 | 8 |
ectodermal cell | 8.34e-07 | 72 |