FFCP PHASE1:Hg19::chr17:38333846..38333858,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51195 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17428 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=98bp_to_ENST00000540388_5end | |||
|cluster_id=chr17:38333846..38333858,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_RAPGEFL1_5end | |||
|id=chr17:38333846..38333858,+ | |||
|ontology_enrichment_celltype=CL:0002076!4.93e-07!43 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.51e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.46e-38!57;UBERON:0005068!4.46e-38!57;UBERON:0006241!4.46e-38!57;UBERON:0007135!4.46e-38!57;UBERON:0003075!2.10e-36!86;UBERON:0007284!2.10e-36!86;UBERON:0002616!2.26e-36!59;UBERON:0000955!1.90e-34!69;UBERON:0006238!1.90e-34!69;UBERON:0002346!4.09e-34!90;UBERON:0000033!5.57e-34!123;UBERON:0002780!2.68e-33!41;UBERON:0001890!2.68e-33!41;UBERON:0006240!2.68e-33!41;UBERON:0003080!2.77e-32!42;UBERON:0000153!1.36e-31!129;UBERON:0007811!1.36e-31!129;UBERON:0005743!2.96e-31!86;UBERON:0001869!3.76e-31!32;UBERON:0001893!5.33e-31!34;UBERON:0003056!8.88e-31!61;UBERON:0007023!1.19e-30!115;UBERON:0002020!1.21e-30!34;UBERON:0003528!1.21e-30!34;UBERON:0001017!2.67e-30!82;UBERON:0000073!5.62e-30!94;UBERON:0001016!5.62e-30!94;UBERON:0002619!9.09e-30!22;UBERON:0004121!2.43e-29!169;UBERON:0002791!2.54e-29!33;UBERON:0000924!3.21e-28!173;UBERON:0006601!3.21e-28!173;UBERON:0001950!1.99e-26!20;UBERON:0000956!1.51e-25!25;UBERON:0000203!1.51e-25!25;UBERON:0000064!7.80e-16!219;UBERON:0000481!1.26e-11!347;UBERON:0001871!4.32e-11!7;UBERON:0000475!1.00e-10!365;UBERON:0002021!4.10e-10!5;UBERON:0000349!4.66e-10!5;UBERON:0004111!7.59e-10!241;UBERON:0004733!1.28e-09!12;UBERON:0002028!1.28e-09!12;UBERON:0007277!1.28e-09!12;UBERON:0000483!6.63e-09!309;UBERON:0004732!9.82e-09!13;UBERON:0000119!1.16e-08!312;UBERON:0000062!1.27e-08!511;UBERON:0000025!1.70e-08!194;UBERON:0000369!2.46e-08!4;UBERON:0002435!2.46e-08!4;UBERON:0000204!2.46e-08!4;UBERON:0010082!2.46e-08!4;UBERON:0000200!3.04e-08!6;UBERON:0000923!8.30e-08!604;UBERON:0005291!8.30e-08!604;UBERON:0006598!8.30e-08!604;UBERON:0002532!8.30e-08!604;UBERON:0002050!9.43e-08!605;UBERON:0005423!9.43e-08!605;UBERON:0000477!1.80e-07!286;UBERON:0002420!2.04e-07!9;UBERON:0007245!2.04e-07!9;UBERON:0010009!2.04e-07!9;UBERON:0010011!2.04e-07!9;UBERON:0000454!2.04e-07!9;UBERON:0000922!2.29e-07!612;UBERON:0003076!2.51e-07!15;UBERON:0003057!2.51e-07!15;UBERON:0000063!3.62e-07!97;UBERON:0000467!3.77e-07!625;UBERON:0000480!4.26e-07!626;UBERON:0002298!6.12e-07!8;UBERON:0001872!8.61e-07!5;UBERON:0002308!9.45e-07!9;UBERON:0000125!9.45e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.05e-38;22!UBERON:0000956;3.49e-34;25!UBERON:0000203;3.49e-34;25!UBERON:0001950;1.79e-32;20!UBERON:0001869;8.23e-30;32!UBERON:0001893;1.99e-28;34!UBERON:0002021;5.54e-26;5!UBERON:0002791;2.38e-24;32!UBERON:0002780;1.60e-20;41!UBERON:0001890;1.60e-20;41!UBERON:0003528;6.01e-20;34!UBERON:0002020;6.01e-20;34!UBERON:0002022;6.43e-16;1!UBERON:0002581;1.78e-15;1!UBERON:0002902;1.78e-15;1!UBERON:0003112;1.78e-15;1!UBERON:0011158;1.78e-15;1!UBERON:0009899;1.78e-15;1!UBERON:0007190;1.78e-15;1!UBERON:0003128;1.78e-15;1!UBERON:0001703;1.78e-15;1!UBERON:0002241;1.78e-15;1!UBERON:0001872;2.82e-12;5!UBERON:0001017;4.20e-11;75!UBERON:0000073;4.83e-11;53!UBERON:0002616;4.83e-11;53!UBERON:0000200;2.19e-10;6!UBERON:0000955;4.07e-10;68!UBERON:0002360;1.29e-08;2!UBERON:0001954;1.29e-08;2!UBERON:0000094;1.29e-08;2!UBERON:0003022;1.29e-08;2!UBERON:0002421;1.29e-08;2!UBERON:0002600;1.29e-08;2!UBERON:0010743;1.29e-08;2!UBERON:0001016;7.58e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,1.35e-38,22;UBERON:0000956,4.35e-34,25;UBERON:0000203,4.35e-34,25;UBERON:0001869,7.31e-34,32;UBERON:0001950,2.38e-32,20;UBERON:0001893,6.89e-32,34;UBERON:0002791,9.58e-27,32;UBERON:0002780,1.87e-26,41;UBERON:0001890,1.87e-26,41;UBERON:0003080,1.87e-26,41;UBERON:0006240,1.87e-26,41;UBERON:0002021,1.01e-25,5;UBERON:0003528,3.48e-25,34;UBERON:0002020,3.48e-25,34;UBERON:0000073,2.09e-20,53;UBERON:0002616,2.09e-20,53;UBERON:0001017,1.28e-19,81;UBERON:0001049,2.73e-19,56;UBERON:0005068,2.73e-19,56;UBERON:0006241,2.73e-19,56;UBERON:0007135,2.73e-19,56;UBERON:0000955,2.80e-19,68;UBERON:0006238,2.80e-19,68;UBERON:0003056,1.14e-17,61;UBERON:0001016,1.36e-17,89;UBERON:0007023,9.45e-17,114;UBERON:0002022,7.46e-16,1;UBERON:0007190,9.99e-16,1;UBERON:0002581,1.34e-15,1;UBERON:0003112,1.78e-15,1;UBERON:0011158,1.78e-15,1;UBERON:0003128,1.78e-15,1;UBERON:0001703,1.78e-15,1;UBERON:0002241,1.78e-15,1;UBERON:0004761,1.78e-15,1;UBERON:0009617,1.78e-15,1;UBERON:0002902,2.06e-15,1;UBERON:0009899,2.06e-15,1;UBERON:0003075,5.53e-13,82;UBERON:0007284,5.53e-13,82;UBERON:0002346,2.40e-12,86;UBERON:0001872,2.99e-12,5;UBERON:0000200,1.65e-10,6;UBERON:0010371,4.49e-10,104;UBERON:0010314,1.24e-09,132;UBERON:0011216,2.81e-09,223;UBERON:0004121,9.71e-09,171;UBERON:0000924,9.71e-09,171;UBERON:0006601,9.71e-09,171;UBERON:0001954,1.20e-08,2;UBERON:0003022,1.20e-08,2;UBERON:0002421,1.20e-08,2;UBERON:0002600,1.20e-08,2;UBERON:0002360,1.29e-08,2;UBERON:0000094,1.29e-08,2;UBERON:0010743,1.29e-08,2;UBERON:0005253,2.15e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.327447688744282,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0.590789906681404,0,0,0,0.329250856225877,0,0,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0.510450849978337,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0.35667105148125,0,0,0,0.379473173765715,0,0,0.670302275535787,0,0,0,0,0.886860307073351,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0.994147647766298,0.562677665642051,0,0,1.05562704063997,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,1.93866549219044,0.649376687132959,0,0,0,0,0.227586896570999,0,0,0,0,0.173624994933292,0.885741385813839,0.482385754501632,0,0.110579259931225,0.591095237907095,2.19385397153973,0,0.139423744278603,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0.995261931078505,0.265372693510018,0,0,0,0,0.067401132980677,0,0.468528891450678,0,0.586993856796269,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0.0821154570532092,0.290967049465258,0,0,0,0,0.949661939338181,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38568906942791,0.408610218334727,0,0.137539436597234,0,0,0.77380195455795,2.12623448303086,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0.146552233678082,0,0.129282956361551,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0.976210119215705,0.3755727921195,0.573409195690071,0.110929051536852,0.310482014706917,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0.383683113910955,0,0,0.218419276384028,0,0,0,0,0,0,0,0,0,0.834979926253974,1.41696576325585,0.478901577171454,1.23069818544453,0.504143392443436,1.45230230174858,1.45328081068666,0,0.294443155503077,0.235939446695481,0,0.577628330751691,0,0,0,0,0,0,0,0,0,1.75597720007826,0.781078098613847,0.620060389503552,1.33173201407204,0,0,0,0,0,0,0,0,0.227662191351298,0,0.115233987555779,0,0.40781839786099,1.57854656550838,0,0,0,0.942693539496011,0.280272163313789,0,0,0,0.0714765441766563,0.158013611732727,0,0,0,0,0.3414369541879,0.691259661814092,0,0,0,0,0.4582137370881,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0.11294608203896,0.109940516745429,0,0.385870790539723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69978725477287,0,0,0,0,0,0,0.109265571963696,0.126698501011437,0.101988829741982,0,0,0,0.0757786982182394,0,0.829169439458779,0.20686599172379,0,0,0,0,0,0,0,0.217716747896961,0,0.26940821205835,0.143444410785353,0.332660356546013,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p3@RAPGEFL1 | |||
}} |
Latest revision as of 00:21, 20 September 2015
Short description: | p3@RAPGEFL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RAPGEFL1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 98bp_to_ENST00000540388_5end |
EntrezGene: | RAPGEFL1 |
HGNC: | 17428 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data