FFCP PHASE1:Hg19::chr19:10047135..10047164,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=93145 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17189 | |||
|TSSclassifier=strong | |||
|UniProt=O95897 | |||
|association_with_transcript=-65bp_to_ENST00000264833,NM_058164,uc002mmp.2_5end | |||
|cluster_id=chr19:10047135..10047164,- | |||
|coexpression_cluster_id=C1807 | |||
|description=CAGE_peak_2_at_OLFM2_5end | |||
|id=chr19:10047135..10047164,- | |||
|ontology_enrichment_celltype=CL:0000047!9.60e-08!8;CL:0000136!5.98e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000540;9.40e-09;6!CL:0000404;9.40e-09;6!CL:0002322;1.53e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.85e-11,8;CL:0000540,8.89e-09,6;CL:0000031,8.89e-09,6;CL:0000404,8.89e-09,6;CL:0002322,1.72e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.88e-11;82!CL:0000031;9.40e-09;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.98e-35!82;UBERON:0000073!8.44e-35!94;UBERON:0001016!8.44e-35!94;UBERON:0005743!4.65e-33!86;UBERON:0001049!1.78e-32!57;UBERON:0005068!1.78e-32!57;UBERON:0006241!1.78e-32!57;UBERON:0007135!1.78e-32!57;UBERON:0002616!6.96e-28!59;UBERON:0002346!3.51e-26!90;UBERON:0000955!1.88e-25!69;UBERON:0006238!1.88e-25!69;UBERON:0002780!8.05e-25!41;UBERON:0001890!8.05e-25!41;UBERON:0006240!8.05e-25!41;UBERON:0001893!3.77e-24!34;UBERON:0002020!4.42e-24!34;UBERON:0003528!4.42e-24!34;UBERON:0003075!7.52e-24!86;UBERON:0007284!7.52e-24!86;UBERON:0003080!8.12e-24!42;UBERON:0002791!2.58e-23!33;UBERON:0007023!3.65e-23!115;UBERON:0001869!8.43e-23!32;UBERON:0000924!1.34e-22!173;UBERON:0006601!1.34e-22!173;UBERON:0004121!1.15e-20!169;UBERON:0000956!1.84e-17!25;UBERON:0000203!1.84e-17!25;UBERON:0000033!1.90e-17!123;UBERON:0000153!4.35e-17!129;UBERON:0007811!4.35e-17!129;UBERON:0003056!2.91e-16!61;UBERON:0002619!3.87e-15!22;UBERON:0001950!1.50e-13!20;UBERON:0000475!5.70e-10!365;UBERON:0003076!1.04e-09!15;UBERON:0003057!1.04e-09!15;UBERON:0002420!3.44e-08!9;UBERON:0007245!3.44e-08!9;UBERON:0010009!3.44e-08!9;UBERON:0010011!3.44e-08!9;UBERON:0000454!3.44e-08!9;UBERON:0002308!4.32e-08!9;UBERON:0000125!4.32e-08!9;UBERON:0004732!5.34e-08!13;UBERON:0004733!1.49e-07!12;UBERON:0002028!1.49e-07!12;UBERON:0007277!1.49e-07!12;UBERON:0000468!9.69e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;3.65e-33;34!UBERON:0002020;3.65e-33;34!UBERON:0001893;7.44e-33;34!UBERON:0001869;1.71e-32;32!UBERON:0002791;2.58e-32;32!UBERON:0000073;1.69e-28;53!UBERON:0002616;1.69e-28;53!UBERON:0002780;2.58e-28;41!UBERON:0001890;2.58e-28;41!UBERON:0000956;8.00e-28;25!UBERON:0000203;8.00e-28;25!UBERON:0002619;4.34e-24;22!UBERON:0001950;1.52e-21;20!UBERON:0000955;1.16e-19;68!UBERON:0001017;2.68e-18;75!UBERON:0001016;6.25e-17;83!UBERON:0002420;4.81e-12;9!UBERON:0007245;4.81e-12;9!UBERON:0010009;4.81e-12;9!UBERON:0010011;4.81e-12;9!UBERON:0000454;4.81e-12;9!UBERON:0000125;6.33e-12;9!UBERON:0002308;6.33e-12;9!UBERON:0004732;1.12e-10;13!UBERON:0004733;5.71e-10;12!UBERON:0002028;5.71e-10;12!UBERON:0009663;1.43e-09;7!UBERON:0000200;1.08e-08;6!UBERON:0002298;1.74e-08;6!UBERON:0000922;2.16e-08;49!UBERON:0000349;4.70e-08;5!UBERON:0007023;6.37e-08;114!UBERON:0001872;2.04e-07;5!UBERON:0001871;2.42e-07;6!UBERON:0011216;5.80e-07;132!UBERON:0000369;6.06e-07;4!UBERON:0002435;6.06e-07;4!UBERON:0000204;6.06e-07;4!UBERON:0002680;9.08e-07;9!UBERON:0001895;9.08e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.18e-55,81;UBERON:0001016,3.89e-53,89;UBERON:0001049,3.99e-53,56;UBERON:0005068,3.99e-53,56;UBERON:0006241,3.99e-53,56;UBERON:0007135,3.99e-53,56;UBERON:0000073,2.11e-49,53;UBERON:0002616,2.11e-49,53;UBERON:0000955,5.31e-42,68;UBERON:0006238,5.31e-42,68;UBERON:0002346,5.62e-42,86;UBERON:0002780,1.79e-40,41;UBERON:0001890,1.79e-40,41;UBERON:0003080,1.79e-40,41;UBERON:0006240,1.79e-40,41;UBERON:0001893,1.22e-38,34;UBERON:0003528,1.58e-38,34;UBERON:0002020,1.58e-38,34;UBERON:0003075,3.59e-38,82;UBERON:0007284,3.59e-38,82;UBERON:0001869,1.81e-36,32;UBERON:0002791,3.97e-36,32;UBERON:0004121,3.04e-30,171;UBERON:0000924,3.04e-30,171;UBERON:0006601,3.04e-30,171;UBERON:0010371,7.68e-30,104;UBERON:0003056,1.34e-28,61;UBERON:0000956,7.24e-28,25;UBERON:0000203,7.24e-28,25;UBERON:0002619,4.02e-24,22;UBERON:0010314,3.92e-23,132;UBERON:0007023,1.49e-22,114;UBERON:0001950,1.47e-21,20;UBERON:0011216,4.86e-18,223;UBERON:0003076,2.27e-13,15;UBERON:0003057,2.27e-13,15;UBERON:0002420,3.61e-12,9;UBERON:0007245,3.61e-12,9;UBERON:0010009,3.61e-12,9;UBERON:0010011,3.61e-12,9;UBERON:0000454,3.61e-12,9;UBERON:0000125,5.19e-12,9;UBERON:0002308,5.19e-12,9;UBERON:0004732,1.07e-10,13;UBERON:0004733,5.54e-10,12;UBERON:0002028,5.54e-10,12;UBERON:0007277,5.54e-10,12;UBERON:0009663,1.07e-09,7;UBERON:0000200,1.06e-08,6;UBERON:0002298,1.95e-08,6;UBERON:0000349,4.56e-08,5;UBERON:0001872,1.89e-07,5;UBERON:0001871,2.45e-07,6;UBERON:0000369,5.95e-07,4;UBERON:0002435,5.95e-07,4;UBERON:0000204,5.95e-07,4;UBERON:0010082,5.95e-07,4;UBERON:0000025,7.39e-07,192;UBERON:0002680,8.41e-07,9;UBERON:0001895,8.41e-07,9;UBERON:0010092,8.41e-07,9 | |||
|phase1_expression=0.908391896352783,3.42560838225573,0.845726424575827,1.0007329835313,0.893922188854576,0,0,6.31719873426831,12.2757245253924,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0.487932798790507,0.61560529038394,0,5.95563970808367,31.4859585844162,2.46373965131192,16.1950005077296,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,2.1686349143074,21.0561922467074,0.434539556882471,0,2.91980922181582,0,0,0.087834785693126,4.45328856692223,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,2.48485975847659,0.12663051166458,0,0,0,1.12135520028461,0,0,0.311211035399766,0,0.163461903113459,0.605429710579726,0,0,0,0,1.04614076386261,0,0,0.140450806702248,0,0,0,0,0.741800787835671,0,0,0,0.125118519871964,0,0.877955241761676,2.45190236639216,2.70428506031874,0.113432183160021,0.179389635688862,3.84403299873421,3.60284231971255,0,0.721367704669072,0.515281080091258,0.744467425326359,0,0,0.252433774244115,1.93304787148829,0.484938170456436,0,0.10075209822764,0.508681776931463,0,0,0,11.3435546700524,10.6023814657188,9.41170937243099,5.18305275076852,6.30802127189071,5.47466038613745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9313088667105,0.590789906681404,0,0.122988438543114,0,0.548751427043128,0,0,0.0925884451585296,0,0,0,1.73895607462615,0,0,0,0,0,1.71697232418975,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0.12624243342638,0.126995788584338,0.381988425558278,0,0,0,0.300343057843917,0,0.112131084345361,0,0.22001485746285,0,17.8828222925941,0,0,0,0,0,0,0,0,0,0.977208552881205,0,0,0,0,0,0,0,0,5.03212196532324,11.4861935834114,0,0,0.410952645100767,0,0,0,0,0,9.90969034467607,22.1237751557957,18.5589315066647,15.7465289414288,13.3967137847164,0,0,0,1.71768088406796,1.00034104211935,0.271265023699736,2.49565033836969,0.356857977594324,0.630809660135739,0,0.300946099727719,0,2.0694614258501,0,1.47495334833363,0.60818530127658,1.37060810223918,2.40200396667599,0,0,0,0,0,0,0.496215615637554,0.306923946576125,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0,5.14929003408069,0.9033987161519,0,0,0.604297247958111,0.200506470303285,0,0,0.182091168006717,0.262248829918848,0,0.231046011313244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44257416306811,0.366277859273374,0,1.14853107599234,0,0,15.3706442084474,0,0.15350367472613,0,0,0.145016693914229,1.10794615640931,6.23224249527162,0,0,0,0,0,0,0,0,0,0,0.74129687641568,0.286249773483982,0,0.316379424718726,0,0,0,0.318203247925937,0,0,0,0,0.202182481573316,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,1.47775344708365,0.658589785919804,0,0.349934720244983,0,0,0,2.16530741786592,0.86101074534246,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,5.77487913158015,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78365540616599,0.242721043499027,0,0,0,0,0,9.94147647766298,10.4095368143779,0,0,0.63337622438398,0.19924798825107,0.276283915531148,0,0,0,18.9734148473703,0,0,0,0.197286811273867,0,0,21.3253204140948,10.2972588959655,31.9382076801911,0,0.0874599999961957,0,0,0,0,0,0.874813840149763,2.08349993919951,8.85741385813839,13.0244153715441,1.52581736317083,7.07707263559838,8.27533333069933,9.43357207762082,0,1.39423744278603,1.53900517007594,0.113942055847001,0,0.0897576444097721,0,0,0.641183153813036,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.176915129006678,0.611030144933625,0,0,0,6.87491556402906,2.40773294189637,8.43352004611221,0,0,0,0,0,3.67287313956588,0.947798694427319,0,0,0,0,0,0,0.284609546029793,0.554698692052555,0.694238953340524,0.195984794828755,0,0,0,0,0,0,0.484945082442097,0.264768380074501,7.6833451865381,0,0,12.4722268033081,0.391102765469606,0,0.85381197895741,0,0,0.458146384663663,0,0,0,0,0,0,0,0,1.80126086612937,5.8869312923557,0,0,0,0.837847203816763,0,0,0.199679000498991,0.429226048136571,0,0.604651252380536,0,0,0,0,0,0.196854963029498,0,9.54275627771164,12.8031201744881,3.3758161177654,4.95141971750042,5.81616473240859,0,0.77380195455795,12.210660888263,0.670869375198532,0,0.577000469484979,0,0,0,1.42939065274673,0,1.017074150619,0,0,0,0,0,0.170388021785422,0,1.31897010310274,0,10.0840705962009,6.21493228190643,0,0,0.320362237703084,0.157204305099666,1.65695622138878,0,0,0,0.638341257770182,11.424373870759,8.5234563967718,4.59518365145192,10.4919241827137,0,5.31640907980192,7.44360215901975,5.50840095108599,5.73409195690071,5.21366542223206,12.1087985735698,0,0,0,1.99825733481477,0,0,0,1.19403842309499,2.80455971816669,0.554805861502613,0,0.251567901752575,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,2.06037423109676,0.673498977531838,0,0,0.857766365499703,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,7.18943867989,0,0,0,3.60370833731054,0,0,0,0,0,0,0,0,0.622077260032973,1.02315497042921,0.107824811396682,0.157265941855896,0.218419276384028,6.11037107834491,5.31437300254207,1.23935764259002,11.7315432774381,0.636008701306837,0,0.80057074828547,10.5802783107205,0,13.1027619196777,0,8.30096067097186,10.6660509405193,14.6201583808597,14.7304947748784,8.2352579272244,1.42769420259154,0,0.353909170043221,0,0,0,0.690359926060101,8.35448132888354,0.676892955143315,0.20170506870352,0,0,0,0,11.9541524774559,3.90539049306924,7.85409826704499,12.3026671776179,4.37579847214576,1.09651553371436,1.98484471355718,6.50723604130596,0,1.07140367175657,1.3451348888753,0,0,0.532214220975833,0,0,6.59306409875268,16.8378300320894,0,0.333694205676207,0.706437835654626,13.1977095529442,0,1.82631744101899,0,0,1.6439605160631,2.3702041759909,0,0.695433089210318,0,0.207216164163037,1.19502933965765,0.691259661814092,0,0,0.0852134047591577,0,0,0,0,2.12525320415805,0,1.21917924982269,0,0.102662806856247,5.799072156691,10.6856418473011,0,1.98950775161368,0.594600453887843,0,0.439762066981716,0,0,1.09279780251979,0,0.490296643507811,1.17838273550813,7.06710481613803,6.53502080719589,10.9890489171684,0,0.0939839179798536,0.257831551894309,0,0.178553938605658,0,0,0,0,4.01350832824064,1.57771562193185,18.2217193711651,12.6541700198709,0,0.371995018166751,1.38652688589425,2.16313281061895,0.126166424835079,0,0,1.32585478664576,1.3360870263278,1.65410819162721,0.752122617877125,1.51557396436479,1.33982065078089,4.1458471972939,3.72358785102823,0.213233981900981,1.42838658878244,0,0.124149428591716,0,0.509177266225319,2.22328907854041,0.870866991587845,0.342233301085281,0.336760265072938,0.215166616178029,3.65926392200615,0.0814032686109745,0,0,0,0,0.611207220914332,6.10344267473608,0,0.805095174364105,0 | |||
|short_description=p2@OLFM2 | |||
}} |
Latest revision as of 22:51, 24 September 2015
Short description: | p2@OLFM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_OLFM2_5end |
Coexpression cluster: | C1807_Chondrocyte_brain_Neural_basal_Astrocyte_mature_Neurons |
Association with transcript: | -65bp_to_ENST00000264833, NM_058164, uc002mmp.2_5end |
EntrezGene: | OLFM2 |
HGNC: | 17189 |
UniProt: | O95897 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.85e-11 | 8 |
neuron | 8.89e-09 | 6 |
neuroblast | 8.89e-09 | 6 |
electrically signaling cell | 8.89e-09 | 6 |
embryonic stem cell | 1.72e-07 | 5 |