FFCP PHASE1:Hg19::chr1:190447009..190447020,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=339479 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22393 | |||
|TSSclassifier=strong | |||
|UniProt=Q76B58 | |||
|association_with_transcript=-250bp_to_ENST00000367462,NM_199051,uc001gse.1_5end | |||
|cluster_id=chr1:190447009..190447020,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_7_at_FAM5C_5end | |||
|id=chr1:190447009..190447020,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.89e-12;3!UBERON:0006601;1.53e-11;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.11e-84!57;UBERON:0005068!7.11e-84!57;UBERON:0006241!7.11e-84!57;UBERON:0007135!7.11e-84!57;UBERON:0002616!4.72e-72!59;UBERON:0001950!1.22e-68!20;UBERON:0002619!2.16e-68!22;UBERON:0000955!4.44e-67!69;UBERON:0006238!4.44e-67!69;UBERON:0002020!5.41e-67!34;UBERON:0003528!5.41e-67!34;UBERON:0001893!8.19e-67!34;UBERON:0001869!4.48e-66!32;UBERON:0001017!3.82e-65!82;UBERON:0002791!1.52e-63!33;UBERON:0002780!2.53e-63!41;UBERON:0001890!2.53e-63!41;UBERON:0006240!2.53e-63!41;UBERON:0005743!9.70e-62!86;UBERON:0003080!1.12e-61!42;UBERON:0000956!7.53e-60!25;UBERON:0000203!7.53e-60!25;UBERON:0003075!4.72e-59!86;UBERON:0007284!4.72e-59!86;UBERON:0002346!4.92e-56!90;UBERON:0000073!4.19e-55!94;UBERON:0001016!4.19e-55!94;UBERON:0007023!1.19e-44!115;UBERON:0003056!1.61e-40!61;UBERON:0000033!2.67e-36!123;UBERON:0000153!3.33e-34!129;UBERON:0007811!3.33e-34!129;UBERON:0004121!3.88e-30!169;UBERON:0000924!3.18e-29!173;UBERON:0006601!3.18e-29!173;UBERON:0000200!1.16e-22!6;UBERON:0001871!2.34e-22!7;UBERON:0000025!2.85e-22!194;UBERON:0003076!3.97e-22!15;UBERON:0003057!3.97e-22!15;UBERON:0002021!1.44e-19!5;UBERON:0001872!4.25e-19!5;UBERON:0004733!4.58e-18!12;UBERON:0002028!4.58e-18!12;UBERON:0007277!4.58e-18!12;UBERON:0004111!3.68e-17!241;UBERON:0004732!1.42e-16!13;UBERON:0000477!7.29e-15!286;UBERON:0000064!3.12e-14!219;UBERON:0002680!3.77e-14!9;UBERON:0001895!3.77e-14!9;UBERON:0010092!3.77e-14!9;UBERON:0000483!6.71e-14!309;UBERON:0000119!1.14e-13!312;UBERON:0000349!2.93e-12!5;UBERON:0002771!5.82e-12!3;UBERON:0000988!2.33e-11!3;UBERON:0002298!6.83e-11!8;UBERON:0000475!2.17e-10!365;UBERON:0002420!2.25e-10!9;UBERON:0007245!2.25e-10!9;UBERON:0010009!2.25e-10!9;UBERON:0010011!2.25e-10!9;UBERON:0000454!2.25e-10!9;UBERON:0002308!4.65e-10!9;UBERON:0000125!4.65e-10!9;UBERON:0000481!9.51e-10!347;UBERON:0001870!3.79e-09!2;UBERON:0000062!3.95e-09!511;UBERON:0000369!5.43e-09!4;UBERON:0002435!5.43e-09!4;UBERON:0000204!5.43e-09!4;UBERON:0010082!5.43e-09!4;UBERON:0001876!8.18e-09!2;UBERON:0002148!3.25e-08!2;UBERON:0009662!3.25e-08!2;UBERON:0000923!3.83e-07!604;UBERON:0005291!3.83e-07!604;UBERON:0006598!3.83e-07!604;UBERON:0002532!3.83e-07!604;UBERON:0002050!4.11e-07!605;UBERON:0005423!4.11e-07!605;UBERON:0000922!6.74e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.69e-90;20!UBERON:0002619;1.97e-82;22!UBERON:0001869;3.15e-74;32!UBERON:0000956;1.18e-72;25!UBERON:0000203;1.18e-72;25!UBERON:0001893;3.49e-67;34!UBERON:0002791;3.92e-67;32!UBERON:0003528;2.28e-59;34!UBERON:0002020;2.28e-59;34!UBERON:0002780;7.72e-45;41!UBERON:0001890;7.72e-45;41!UBERON:0000200;4.88e-36;6!UBERON:0000073;1.04e-34;53!UBERON:0002616;1.04e-34;53!UBERON:0000955;1.73e-28;68!UBERON:0002021;1.83e-28;5!UBERON:0001872;1.02e-27;5!UBERON:0001870;2.84e-27;3!UBERON:0001017;2.93e-22;75!UBERON:0002702;1.09e-18;2!UBERON:0001016;1.63e-16;83!UBERON:0001871;7.97e-12;6!UBERON:0002581;5.78e-10;1!UBERON:0002902;5.78e-10;1!UBERON:0001882;5.78e-10;1!UBERON:0002022;5.78e-10;1!UBERON:0003112;5.78e-10;1!UBERON:0011158;5.78e-10;1!UBERON:0009899;5.78e-10;1!UBERON:0007190;5.78e-10;1!UBERON:0003128;5.78e-10;1!UBERON:0005403;5.78e-10;1!UBERON:0001703;5.78e-10;1!UBERON:0002241;5.78e-10;1!UBERON:0000369;1.45e-09;4!UBERON:0002435;1.45e-09;4!UBERON:0000204;1.45e-09;4!UBERON:0002420;2.60e-09;9!UBERON:0007245;2.60e-09;9!UBERON:0010009;2.60e-09;9!UBERON:0010011;2.60e-09;9!UBERON:0000454;2.60e-09;9!UBERON:0007023;3.61e-08;114!UBERON:0011216;5.01e-08;132!UBERON:0000349;5.58e-08;5!UBERON:0010314;5.58e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,1.38e-90,20;UBERON:0002619,1.64e-82,22;UBERON:0001869,8.85e-82,32;UBERON:0001893,5.93e-77,34;UBERON:0002791,5.72e-73,32;UBERON:0000956,1.00e-72,25;UBERON:0000203,1.00e-72,25;UBERON:0003528,1.19e-68,34;UBERON:0002020,1.19e-68,34;UBERON:0002780,1.12e-63,41;UBERON:0001890,1.12e-63,41;UBERON:0003080,1.12e-63,41;UBERON:0006240,1.12e-63,41;UBERON:0000073,7.11e-61,53;UBERON:0002616,7.11e-61,53;UBERON:0001049,1.62e-57,56;UBERON:0005068,1.62e-57,56;UBERON:0006241,1.62e-57,56;UBERON:0007135,1.62e-57,56;UBERON:0000955,2.45e-51,68;UBERON:0006238,2.45e-51,68;UBERON:0001017,8.04e-43,81;UBERON:0003056,3.07e-42,61;UBERON:0003075,1.44e-38,82;UBERON:0007284,1.44e-38,82;UBERON:0001016,2.48e-38,89;UBERON:0002346,1.18e-36,86;UBERON:0000200,5.29e-36,6;UBERON:0010371,7.54e-30,104;UBERON:0002021,1.25e-28,5;UBERON:0001872,1.26e-27,5;UBERON:0001870,2.98e-27,3;UBERON:0010314,1.54e-25,132;UBERON:0007023,2.00e-24,114;UBERON:0004121,9.02e-19,171;UBERON:0000924,9.02e-19,171;UBERON:0006601,9.02e-19,171;UBERON:0002702,1.10e-18,2;UBERON:0011216,3.07e-15,223;UBERON:0000025,8.57e-15,192;UBERON:0001871,8.14e-12,6;UBERON:0004111,3.42e-11,240;UBERON:0002902,3.40e-10,1;UBERON:0009899,3.40e-10,1;UBERON:0003112,3.71e-10,1;UBERON:0011158,3.71e-10,1;UBERON:0003128,3.71e-10,1;UBERON:0001703,3.71e-10,1;UBERON:0002241,3.71e-10,1;UBERON:0004761,3.71e-10,1;UBERON:0009617,3.71e-10,1;UBERON:0002581,4.06e-10,1;UBERON:0002022,4.85e-10,1;UBERON:0001882,8.24e-10,1;UBERON:0005403,8.24e-10,1;UBERON:0007190,1.17e-09,1;UBERON:0000369,2.34e-09,4;UBERON:0002435,2.34e-09,4;UBERON:0000204,2.34e-09,4;UBERON:0010082,2.34e-09,4;UBERON:0002420,3.40e-09,9;UBERON:0007245,3.40e-09,9;UBERON:0010009,3.40e-09,9;UBERON:0010011,3.40e-09,9;UBERON:0000454,3.40e-09,9;UBERON:0000483,4.62e-08,306;UBERON:0000119,5.96e-08,309;UBERON:0000349,6.10e-08,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606802608747567,0,0,0,0,0,2.98244294329889,0.984685914873589,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,0.649376687132959,0,0,0.61221999997337,0,0,0,0,0,0,0,0,1.08536794762867,0,1.99042667876204,1.18219047581419,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0.0884575645033392,0,0.296521128680622,0,0,0.067401132980677,0,0,0,0,0,0.394584402849391,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0,0,0,2.15256706249988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,1.45798935979259,0,0,0,0,0,0,0,0,2.034148301238,0,0,0,0,0,0,0,0,0,0.775697738169303,0.52893040697076,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,3.54427271986794,1.46431517882356,1.251909307065,0,0.110929051536852,0.745156835296601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15612605173627,4.25089728976755,0.638535436228605,1.23069818544453,2.26864526599546,1.79808856406967,1.61475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08060135389431,0.781078098613847,1.44680757550829,1.20490039368423,1.09394961803644,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0.40781839786099,1.57854656550838,0,0,0,0.628462359664008,0,0,0,0,0,0,0.464965701472501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.981542335574726,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,1.15585533324555,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p7@FAM5C | |||
}} |
Latest revision as of 09:16, 19 September 2015
Short description: | p7@FAM5C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_FAM5C_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -250bp_to_ENST00000367462, NM_199051, uc001gse.1_5end |
EntrezGene: | FAM5C |
HGNC: | 22393 |
UniProt: | Q76B58 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data