FFCP PHASE1:Mm9::chr10:80464083..80464115,-: Difference between revisions
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{{FFCP|EntrezGene=14708|HGNC=|MCL_coexpression_id=328|UniProt=G3X9Q2,Q3UGN1,Q61016|association_with_transcript=0bp_to_ENSMUST00000099462,NM_001038655,uc007gfm.1_5end|description=CAGE_peak_3_at_Gng7_5end|id=chr10:80464083..80464115,-|ontology_enrichment_celltype=CL:0000117!1.80e-19!23;CL:0000337!1.80e-19!23;CL:0000540!5.88e-12!33;CL:0000047!5.88e-12!33;CL:0000031!5.88e-12!33;CL:0000404!5.88e-12!33;CL:0000393!7.03e-09!39;CL:0000211!7.03e-09!39;CL:0002319!5.51e-08!43;CL:0000221!1.25e-07!44;CL:0000133!1.25e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,6.45e-28,23;CL:0000337,6.45e-28,23;CL:0000540,9.58e-18,33;CL:0000047,9.58e-18,33;CL:0000031,9.58e-18,33;CL:0000404,9.58e-18,33;CL:0000393,3.60e-14,39;CL:0000211,3.60e-14,39;CL:0002319,2.37e-12,43;CL:0000221,5.98e-12,44;CL:0000133,5.98e-12,44;CL:0002609,8.90e-10,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.07e-31!52;UBERON:0005068!2.07e-31!52;UBERON:0006241!2.07e-31!52;UBERON:0007135!2.07e-31!52;UBERON:0000955!6.62e-30!50;UBERON:0006238!6.62e-30!50;UBERON:0002616!5.68e-29!49;UBERON:0002020!2.74e-28!34;UBERON:0003080!1.01e-27!40;UBERON:0001017!1.15e-27!73;UBERON:0005743!1.15e-27!73;UBERON:0002780!8.84e-27!39;UBERON:0001890!8.84e-27!39;UBERON:0006240!8.84e-27!39;UBERON:0000073!2.09e-26!75;UBERON:0001016!2.09e-26!75;UBERON:0002791!7.99e-24!29;UBERON:0003528!7.99e-24!29;UBERON:0001893!7.99e-24!29;UBERON:0000033!2.05e-23!63;UBERON:0003056!2.05e-23!49;UBERON:0002346!2.98e-21!71;UBERON:0003075!2.98e-21!71;UBERON:0007284!2.98e-21!71;UBERON:0000956!4.72e-17!21;UBERON:0001869!4.72e-17!21;UBERON:0000203!4.72e-17!21;UBERON:0004121!1.34e-16!102;UBERON:0000924!1.34e-16!102;UBERON:0006601!1.34e-16!102;UBERON:0002619!1.71e-13!17;UBERON:0007811!7.72e-13!86;UBERON:0002021!1.19e-11!10;UBERON:0000411!1.19e-11!10;UBERON:0001950!1.19e-11!10;UBERON:0000025!3.55e-11!114;UBERON:0000153!1.76e-10!94;UBERON:0004111!2.32e-09!122;UBERON:0002420!7.12e-08!8;UBERON:0007245!7.12e-08!8;UBERON:0010009!7.12e-08!8;UBERON:0010011!7.12e-08!8;UBERON:0000454!7.12e-08!8|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.59e-46,34;UBERON:0000073,2.93e-44,54;UBERON:0003528,1.02e-38,29;UBERON:0002791,1.02e-38,29;UBERON:0001893,1.02e-38,29;UBERON:0001049,1.37e-38,52;UBERON:0005068,1.37e-38,52;UBERON:0006241,1.37e-38,52;UBERON:0007135,1.37e-38,52;UBERON:0003080,2.43e-38,40;UBERON:0002780,9.10e-37,39;UBERON:0001890,9.10e-37,39;UBERON:0006240,9.10e-37,39;UBERON:0001017,1.09e-35,73;UBERON:0001016,1.86e-34,75;UBERON:0000955,1.13e-33,47;UBERON:0006238,1.13e-33,47;UBERON:0002616,3.28e-32,46;UBERON:0003056,1.04e-29,49;UBERON:0002346,1.50e-29,64;UBERON:0003075,1.50e-29,64;UBERON:0007284,1.50e-29,64;UBERON:0000956,1.54e-29,21;UBERON:0001869,1.54e-29,21;UBERON:0000203,1.54e-29,21;UBERON:0004121,5.53e-25,95;UBERON:0000924,5.53e-25,95;UBERON:0006601,5.53e-25,95;UBERON:0010371,1.00e-24,73;UBERON:0002619,2.78e-23,17;UBERON:0002021,3.63e-19,10;UBERON:0000411,3.63e-19,10;UBERON:0001950,3.63e-19,10;UBERON:0010314,1.17e-17,92;UBERON:0000025,1.91e-12,114;UBERON:0004111,5.01e-11,122;UBERON:0002420,4.94e-10,8;UBERON:0007245,4.94e-10,8;UBERON:0010009,4.94e-10,8;UBERON:0010011,4.94e-10,8;UBERON:0000454,4.94e-10,8;UBERON:0001948,1.33e-08,5;UBERON:0002315,1.33e-08,5;UBERON:0002950,2.23e-07,4;UBERON:0001891,2.23e-07,4;UBERON:0009616,2.23e-07,4;UBERON:0010286,2.23e-07,4;UBERON:0002240,4.30e-07,6;UBERON:0005174,4.30e-07,6;UBERON:0001137,4.30e-07,6;UBERON:0011216,6.33e-07,194|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0.606949382578793,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0,3.00699875694585,3.91517221161903,3.99617426567626,2.57085885963423,4.41737081903227,4.16468717330844,2.77951865952885,2.75765635983006,3.30347642998166,6.2566795661742,4.76180253094355,0.923204014111357,3.11057988248193,1.56274011167028,1.3959149950069,6.75315132038016,6.87592114995646,7.07108605136802,4.8406371471695,1.3047961207771,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.6435098215495,7.32000964509802,5.78010019719176,15.9918374576894,10.9957646652042,8.51930982694196,9.73447578406546,0,0,0,0,0,0,0,0,0.272145996605311,0.384341160854549,0.281105173679186,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0.180062061461015,0.23674473558521,0.590292695242212,0,0.465067889500816,0,0,0.16455984991348,0.164167464079095,0.0810688095458557,0.146199987425332,0,0,50.2592977068264,8.84979666461846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,0.586058432961016,0,0,0,0,0,0,0,0.283076530788832,0,0,0,4.17717711348349,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,1.02131881726136,0,0.129358683782755,0,0.354680467284547,0.713475270408282,0.822745103010605,1.522324745573,0,0,0,0,0,0,0,0,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523511883968059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167884616364078,0,0,0,0,0,12.9892923801925,14.2700823317225,15.4681788628637,7.90524638780963,7.53590771747707,9.82012066606611,9.45031500324528,9.00642406448441,8.15656336171568,9.83744592328458,0,0.399024873401031,0.341467211508268,0.243106717068294,0.838452650511929,1.10306105070008,0.888986911206461,0.824140228955577,0.64183841918363,0.758091635291392,1.01391719956096,1.13175804831646,0.842773567228942,0.704276676453562,0.516919220600519,0,1.0429589335037,0.964546102318525,1.23625770240992,0.294397840268795,1.02860775715625,0.887379030796687,0.953744759789284,0.436039249896986,0.658765662907314,0.761531471025089,0.914639864363863,0.789209134313529,0.679020569229309,1.12228454331548,0.593175090620871,0.492522411877817,0,1.23949472948773,0.771626443924566,1.74867404556562,0,0.644613162144895,0.191288332068843,0.220591419119515,0|short_description=p3@Gng7}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14708 | |||
|HGNC= | |||
|MCL_coexpression_id=328 | |||
|TSSclassifier=NA | |||
|UniProt=G3X9Q2,Q3UGN1,Q61016 | |||
|association_with_transcript=0bp_to_ENSMUST00000099462,NM_001038655,uc007gfm.1_5end | |||
|cluster_id=chr10:80464083..80464115,- | |||
|description=CAGE_peak_3_at_Gng7_5end | |||
|id=chr10:80464083..80464115,- | |||
|ontology_enrichment_celltype=CL:0000117!1.80e-19!23;CL:0000337!1.80e-19!23;CL:0000540!5.88e-12!33;CL:0000047!5.88e-12!33;CL:0000031!5.88e-12!33;CL:0000404!5.88e-12!33;CL:0000393!7.03e-09!39;CL:0000211!7.03e-09!39;CL:0002319!5.51e-08!43;CL:0000221!1.25e-07!44;CL:0000133!1.25e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.45e-28,23;CL:0000337,6.45e-28,23;CL:0000540,9.58e-18,33;CL:0000047,9.58e-18,33;CL:0000031,9.58e-18,33;CL:0000404,9.58e-18,33;CL:0000393,3.60e-14,39;CL:0000211,3.60e-14,39;CL:0002319,2.37e-12,43;CL:0000221,5.98e-12,44;CL:0000133,5.98e-12,44;CL:0002609,8.90e-10,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.07e-31!52;UBERON:0005068!2.07e-31!52;UBERON:0006241!2.07e-31!52;UBERON:0007135!2.07e-31!52;UBERON:0000955!6.62e-30!50;UBERON:0006238!6.62e-30!50;UBERON:0002616!5.68e-29!49;UBERON:0002020!2.74e-28!34;UBERON:0003080!1.01e-27!40;UBERON:0001017!1.15e-27!73;UBERON:0005743!1.15e-27!73;UBERON:0002780!8.84e-27!39;UBERON:0001890!8.84e-27!39;UBERON:0006240!8.84e-27!39;UBERON:0000073!2.09e-26!75;UBERON:0001016!2.09e-26!75;UBERON:0002791!7.99e-24!29;UBERON:0003528!7.99e-24!29;UBERON:0001893!7.99e-24!29;UBERON:0000033!2.05e-23!63;UBERON:0003056!2.05e-23!49;UBERON:0002346!2.98e-21!71;UBERON:0003075!2.98e-21!71;UBERON:0007284!2.98e-21!71;UBERON:0000956!4.72e-17!21;UBERON:0001869!4.72e-17!21;UBERON:0000203!4.72e-17!21;UBERON:0004121!1.34e-16!102;UBERON:0000924!1.34e-16!102;UBERON:0006601!1.34e-16!102;UBERON:0002619!1.71e-13!17;UBERON:0007811!7.72e-13!86;UBERON:0002021!1.19e-11!10;UBERON:0000411!1.19e-11!10;UBERON:0001950!1.19e-11!10;UBERON:0000025!3.55e-11!114;UBERON:0000153!1.76e-10!94;UBERON:0004111!2.32e-09!122;UBERON:0002420!7.12e-08!8;UBERON:0007245!7.12e-08!8;UBERON:0010009!7.12e-08!8;UBERON:0010011!7.12e-08!8;UBERON:0000454!7.12e-08!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.59e-46,34;UBERON:0000073,2.93e-44,54;UBERON:0003528,1.02e-38,29;UBERON:0002791,1.02e-38,29;UBERON:0001893,1.02e-38,29;UBERON:0001049,1.37e-38,52;UBERON:0005068,1.37e-38,52;UBERON:0006241,1.37e-38,52;UBERON:0007135,1.37e-38,52;UBERON:0003080,2.43e-38,40;UBERON:0002780,9.10e-37,39;UBERON:0001890,9.10e-37,39;UBERON:0006240,9.10e-37,39;UBERON:0001017,1.09e-35,73;UBERON:0001016,1.86e-34,75;UBERON:0000955,1.13e-33,47;UBERON:0006238,1.13e-33,47;UBERON:0002616,3.28e-32,46;UBERON:0003056,1.04e-29,49;UBERON:0002346,1.50e-29,64;UBERON:0003075,1.50e-29,64;UBERON:0007284,1.50e-29,64;UBERON:0000956,1.54e-29,21;UBERON:0001869,1.54e-29,21;UBERON:0000203,1.54e-29,21;UBERON:0004121,5.53e-25,95;UBERON:0000924,5.53e-25,95;UBERON:0006601,5.53e-25,95;UBERON:0010371,1.00e-24,73;UBERON:0002619,2.78e-23,17;UBERON:0002021,3.63e-19,10;UBERON:0000411,3.63e-19,10;UBERON:0001950,3.63e-19,10;UBERON:0010314,1.17e-17,92;UBERON:0000025,1.91e-12,114;UBERON:0004111,5.01e-11,122;UBERON:0002420,4.94e-10,8;UBERON:0007245,4.94e-10,8;UBERON:0010009,4.94e-10,8;UBERON:0010011,4.94e-10,8;UBERON:0000454,4.94e-10,8;UBERON:0001948,1.33e-08,5;UBERON:0002315,1.33e-08,5;UBERON:0002950,2.23e-07,4;UBERON:0001891,2.23e-07,4;UBERON:0009616,2.23e-07,4;UBERON:0010286,2.23e-07,4;UBERON:0002240,4.30e-07,6;UBERON:0005174,4.30e-07,6;UBERON:0001137,4.30e-07,6;UBERON:0011216,6.33e-07,194 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0.606949382578793,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0,3.00699875694585,3.91517221161903,3.99617426567626,2.57085885963423,4.41737081903227,4.16468717330844,2.77951865952885,2.75765635983006,3.30347642998166,6.2566795661742,4.76180253094355,0.923204014111357,3.11057988248193,1.56274011167028,1.3959149950069,6.75315132038016,6.87592114995646,7.07108605136802,4.8406371471695,1.3047961207771,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.6435098215495,7.32000964509802,5.78010019719176,15.9918374576894,10.9957646652042,8.51930982694196,9.73447578406546,0,0,0,0,0,0,0,0,0.272145996605311,0.384341160854549,0.281105173679186,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0.180062061461015,0.23674473558521,0.590292695242212,0,0.465067889500816,0,0,0.16455984991348,0.164167464079095,0.0810688095458557,0.146199987425332,0,0,50.2592977068264,8.84979666461846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,0.586058432961016,0,0,0,0,0,0,0,0.283076530788832,0,0,0,4.17717711348349,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,1.02131881726136,0,0.129358683782755,0,0.354680467284547,0.713475270408282,0.822745103010605,1.522324745573,0,0,0,0,0,0,0,0,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523511883968059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167884616364078,0,0,0,0,0,12.9892923801925,14.2700823317225,15.4681788628637,7.90524638780963,7.53590771747707,9.82012066606611,9.45031500324528,9.00642406448441,8.15656336171568,9.83744592328458,0,0.399024873401031,0.341467211508268,0.243106717068294,0.838452650511929,1.10306105070008,0.888986911206461,0.824140228955577,0.64183841918363,0.758091635291392,1.01391719956096,1.13175804831646,0.842773567228942,0.704276676453562,0.516919220600519,0,1.0429589335037,0.964546102318525,1.23625770240992,0.294397840268795,1.02860775715625,0.887379030796687,0.953744759789284,0.436039249896986,0.658765662907314,0.761531471025089,0.914639864363863,0.789209134313529,0.679020569229309,1.12228454331548,0.593175090620871,0.492522411877817,0,1.23949472948773,0.771626443924566,1.74867404556562,0,0.644613162144895,0.191288332068843,0.220591419119515,0 | |||
|short_description=p3@Gng7 | |||
}} |
Latest revision as of 10:33, 26 September 2015
Short description: | p3@Gng7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Gng7_5end |
Coexpression cluster: | MCL_coexpression_mm9:328 |
Association with transcript: | 0bp_to_ENSMUST00000099462, NM_001038655, uc007gfm.1_5end |
EntrezGene: | Gng7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.45e-28 | 23 |
neuroblast (sensu Vertebrata) | 6.45e-28 | 23 |
neuron | 9.58e-18 | 33 |
neuronal stem cell | 9.58e-18 | 33 |
neuroblast | 9.58e-18 | 33 |
electrically signaling cell | 9.58e-18 | 33 |
electrically responsive cell | 3.60e-14 | 39 |
electrically active cell | 3.60e-14 | 39 |
neural cell | 2.37e-12 | 43 |
ectodermal cell | 5.98e-12 | 44 |
neurectodermal cell | 5.98e-12 | 44 |
neuron of cerebral cortex | 8.90e-10 | 6 |