FFCP PHASE1:Mm9::chr10:9395197..9395214,-: Difference between revisions
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{{FFCP|EntrezGene=320825|HGNC=|UniProt=Q3V1H9|association_with_transcript=-191bp_to_ENSMUST00000100070,NM_177271,uc007eiw.1_5end|description=CAGE_peak_3_at_Samd5_5end|id=chr10:9395197..9395214,-|ontology_enrichment_celltype=CL:0000221!1.24e-09!44;CL:0000133!1.24e-09!44;CL:0000055!1.43e-09!50;CL:0002319!1.78e-09!43;CL:0000540!3.13e-09!33;CL:0000047!3.13e-09!33;CL:0000031!3.13e-09!33;CL:0000404!3.13e-09!33;CL:0000393!6.43e-09!39;CL:0000211!6.43e-09!39|ontology_enrichment_celltype_v019_2=CL:0002319,1.71e-12,43;CL:0000221,4.83e-12,44;CL:0000133,4.83e-12,44;CL:0000540,9.57e-11,33;CL:0000047,9.57e-11,33;CL:0000031,9.57e-11,33;CL:0000404,9.57e-11,33;CL:0000393,2.31e-09,39;CL:0000211,2.31e-09,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.72e-22!73;UBERON:0005743!4.72e-22!73;UBERON:0000073!9.98e-22!75;UBERON:0001016!9.98e-22!75;UBERON:0004121!5.77e-19!102;UBERON:0000924!5.77e-19!102;UBERON:0006601!5.77e-19!102;UBERON:0000955!8.83e-17!50;UBERON:0006238!8.83e-17!50;UBERON:0000033!1.30e-16!63;UBERON:0002616!2.85e-16!49;UBERON:0002346!3.58e-16!71;UBERON:0003075!3.58e-16!71;UBERON:0007284!3.58e-16!71;UBERON:0001049!3.72e-16!52;UBERON:0005068!3.72e-16!52;UBERON:0006241!3.72e-16!52;UBERON:0007135!3.72e-16!52;UBERON:0003056!4.19e-15!49;UBERON:0003080!1.72e-14!40;UBERON:0002780!6.05e-14!39;UBERON:0001890!6.05e-14!39;UBERON:0006240!6.05e-14!39;UBERON:0002020!5.02e-12!34;UBERON:0000025!5.09e-12!114;UBERON:0004111!4.03e-11!122;UBERON:0002791!7.73e-11!29;UBERON:0003528!7.73e-11!29;UBERON:0001893!7.73e-11!29;UBERON:0002619!2.11e-08!17;UBERON:0000956!1.23e-07!21;UBERON:0001869!1.23e-07!21;UBERON:0000203!1.23e-07!21;UBERON:0002021!7.16e-07!10;UBERON:0000411!7.16e-07!10;UBERON:0001950!7.16e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.19e-32,73;UBERON:0001016,2.21e-31,75;UBERON:0004121,7.00e-25,95;UBERON:0000924,7.00e-25,95;UBERON:0006601,7.00e-25,95;UBERON:0000073,2.14e-24,54;UBERON:0002346,2.54e-23,64;UBERON:0003075,2.54e-23,64;UBERON:0007284,2.54e-23,64;UBERON:0000955,5.89e-22,47;UBERON:0006238,5.89e-22,47;UBERON:0001049,8.53e-22,52;UBERON:0005068,8.53e-22,52;UBERON:0006241,8.53e-22,52;UBERON:0007135,8.53e-22,52;UBERON:0002616,4.89e-21,46;UBERON:0003080,1.37e-20,40;UBERON:0002780,1.39e-19,39;UBERON:0001890,1.39e-19,39;UBERON:0006240,1.39e-19,39;UBERON:0010371,6.20e-19,73;UBERON:0003056,1.22e-18,49;UBERON:0003528,2.10e-17,29;UBERON:0002791,2.10e-17,29;UBERON:0001893,2.10e-17,29;UBERON:0002020,6.64e-17,34;UBERON:0010314,1.38e-12,92;UBERON:0002619,1.40e-12,17;UBERON:0002021,3.53e-12,10;UBERON:0000411,3.53e-12,10;UBERON:0001950,3.53e-12,10;UBERON:0000956,5.47e-11,21;UBERON:0001869,5.47e-11,21;UBERON:0000203,5.47e-11,21;UBERON:0011216,1.49e-08,194;UBERON:0000025,5.45e-08,114;UBERON:0002420,6.41e-08,8;UBERON:0007245,6.41e-08,8;UBERON:0010009,6.41e-08,8;UBERON:0010011,6.41e-08,8;UBERON:0000454,6.41e-08,8;UBERON:0004111,2.21e-07,122|phase1_expression=0.480446541314382,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0.215471232685889,0.380046838912748,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.405507724878058,2.0190142737785,0,1.30815093828268,1.97717564461025,2.13872888981712,0.139986421625363,0,0,0,0,0.771778308107841,0.286533439938757,0,0.606949382578793,3.1739458756322,0,0,0,0.899899717281399,0,0.7104801149461,1.49800055259202,3.07374644257244,0.207379224616955,0.270011876663381,0.210324961351382,0.285650984403804,0.883474163806454,0.244981598429908,0.479227355091182,0.919218786610021,2.20231761998777,4.34136949489638,2.76491759861238,4.08847491963601,1.73826522844578,3.64639359389732,1.67509799400829,3.37657566019008,1.68078072554491,2.06240009831567,1.28134512719193,0.931997229126503,0.37863096666592,0.302286240427142,0.869593466105033,0.860423876981386,0,0,0,0.448026887097336,0.140444420131752,0,0,0,0.704217098883403,0,0,0,0.432982082022428,0,0,0.11418387971906,0,0.148442139064825,0,0,0.461230994512117,0.301445281105245,0.352766121407114,0.251333182659351,0.247194967734374,0.144599356919912,0,0.808834249737046,0.441683036920787,0,0,0,1.04723353406728,0.255457055208591,1.43778149407104,0,0.762421362438388,1.9472783122627,1.37250180845588,0.125654352112864,1.73824320192276,2.81287003063364,3.53239675751252,2.10913641988085,0.509196819251581,0.497627882440372,1.0108910337347,0.420883711772948,0.520481771850815,0.459804208866946,0.180062129805349,1.05493372485001,0.748401490664606,1.0249097622788,1.03071897015702,0.517406741478031,0.215567992932842,0.378212160335639,0.175951124163949,0.219195732427575,0.278047249225598,0.348252166522167,0.411564272815887,0,0.702213187313235,1.02939162845886,1.13665399758237,0.828503090142008,0.234526059981096,0.540186184383045,0.710234206755631,0.393528463494808,0.617068451549513,0.232533944750408,0,0.934122738937356,0.658239399653922,0.985004784474571,0.405344047729279,0.292399974850665,0.219550115291051,0,1.68231958851302,1.3377599609307,0,0.264450566663544,1.27972950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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=320825 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=Q3V1H9 | |||
|association_with_transcript=-191bp_to_ENSMUST00000100070,NM_177271,uc007eiw.1_5end | |||
|cluster_id=chr10:9395197..9395214,- | |||
|description=CAGE_peak_3_at_Samd5_5end | |||
|id=chr10:9395197..9395214,- | |||
|ontology_enrichment_celltype=CL:0000221!1.24e-09!44;CL:0000133!1.24e-09!44;CL:0000055!1.43e-09!50;CL:0002319!1.78e-09!43;CL:0000540!3.13e-09!33;CL:0000047!3.13e-09!33;CL:0000031!3.13e-09!33;CL:0000404!3.13e-09!33;CL:0000393!6.43e-09!39;CL:0000211!6.43e-09!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.71e-12,43;CL:0000221,4.83e-12,44;CL:0000133,4.83e-12,44;CL:0000540,9.57e-11,33;CL:0000047,9.57e-11,33;CL:0000031,9.57e-11,33;CL:0000404,9.57e-11,33;CL:0000393,2.31e-09,39;CL:0000211,2.31e-09,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.72e-22!73;UBERON:0005743!4.72e-22!73;UBERON:0000073!9.98e-22!75;UBERON:0001016!9.98e-22!75;UBERON:0004121!5.77e-19!102;UBERON:0000924!5.77e-19!102;UBERON:0006601!5.77e-19!102;UBERON:0000955!8.83e-17!50;UBERON:0006238!8.83e-17!50;UBERON:0000033!1.30e-16!63;UBERON:0002616!2.85e-16!49;UBERON:0002346!3.58e-16!71;UBERON:0003075!3.58e-16!71;UBERON:0007284!3.58e-16!71;UBERON:0001049!3.72e-16!52;UBERON:0005068!3.72e-16!52;UBERON:0006241!3.72e-16!52;UBERON:0007135!3.72e-16!52;UBERON:0003056!4.19e-15!49;UBERON:0003080!1.72e-14!40;UBERON:0002780!6.05e-14!39;UBERON:0001890!6.05e-14!39;UBERON:0006240!6.05e-14!39;UBERON:0002020!5.02e-12!34;UBERON:0000025!5.09e-12!114;UBERON:0004111!4.03e-11!122;UBERON:0002791!7.73e-11!29;UBERON:0003528!7.73e-11!29;UBERON:0001893!7.73e-11!29;UBERON:0002619!2.11e-08!17;UBERON:0000956!1.23e-07!21;UBERON:0001869!1.23e-07!21;UBERON:0000203!1.23e-07!21;UBERON:0002021!7.16e-07!10;UBERON:0000411!7.16e-07!10;UBERON:0001950!7.16e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.19e-32,73;UBERON:0001016,2.21e-31,75;UBERON:0004121,7.00e-25,95;UBERON:0000924,7.00e-25,95;UBERON:0006601,7.00e-25,95;UBERON:0000073,2.14e-24,54;UBERON:0002346,2.54e-23,64;UBERON:0003075,2.54e-23,64;UBERON:0007284,2.54e-23,64;UBERON:0000955,5.89e-22,47;UBERON:0006238,5.89e-22,47;UBERON:0001049,8.53e-22,52;UBERON:0005068,8.53e-22,52;UBERON:0006241,8.53e-22,52;UBERON:0007135,8.53e-22,52;UBERON:0002616,4.89e-21,46;UBERON:0003080,1.37e-20,40;UBERON:0002780,1.39e-19,39;UBERON:0001890,1.39e-19,39;UBERON:0006240,1.39e-19,39;UBERON:0010371,6.20e-19,73;UBERON:0003056,1.22e-18,49;UBERON:0003528,2.10e-17,29;UBERON:0002791,2.10e-17,29;UBERON:0001893,2.10e-17,29;UBERON:0002020,6.64e-17,34;UBERON:0010314,1.38e-12,92;UBERON:0002619,1.40e-12,17;UBERON:0002021,3.53e-12,10;UBERON:0000411,3.53e-12,10;UBERON:0001950,3.53e-12,10;UBERON:0000956,5.47e-11,21;UBERON:0001869,5.47e-11,21;UBERON:0000203,5.47e-11,21;UBERON:0011216,1.49e-08,194;UBERON:0000025,5.45e-08,114;UBERON:0002420,6.41e-08,8;UBERON:0007245,6.41e-08,8;UBERON:0010009,6.41e-08,8;UBERON:0010011,6.41e-08,8;UBERON:0000454,6.41e-08,8;UBERON:0004111,2.21e-07,122 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0.215471232685889,0.380046838912748,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.405507724878058,2.0190142737785,0,1.30815093828268,1.97717564461025,2.13872888981712,0.139986421625363,0,0,0,0,0.771778308107841,0.286533439938757,0,0.606949382578793,3.1739458756322,0,0,0,0.899899717281399,0,0.7104801149461,1.49800055259202,3.07374644257244,0.207379224616955,0.270011876663381,0.210324961351382,0.285650984403804,0.883474163806454,0.244981598429908,0.479227355091182,0.919218786610021,2.20231761998777,4.34136949489638,2.76491759861238,4.08847491963601,1.73826522844578,3.64639359389732,1.67509799400829,3.37657566019008,1.68078072554491,2.06240009831567,1.28134512719193,0.931997229126503,0.37863096666592,0.302286240427142,0.869593466105033,0.860423876981386,0,0,0,0.448026887097336,0.140444420131752,0,0,0,0.704217098883403,0,0,0,0.432982082022428,0,0,0.11418387971906,0,0.148442139064825,0,0,0.461230994512117,0.301445281105245,0.352766121407114,0.251333182659351,0.247194967734374,0.144599356919912,0,0.808834249737046,0.441683036920787,0,0,0,1.04723353406728,0.255457055208591,1.43778149407104,0,0.762421362438388,1.9472783122627,1.37250180845588,0.125654352112864,1.73824320192276,2.81287003063364,3.53239675751252,2.10913641988085,0.509196819251581,0.497627882440372,1.0108910337347,0.420883711772948,0.520481771850815,0.459804208866946,0.180062129805349,1.05493372485001,0.748401490664606,1.0249097622788,1.03071897015702,0.517406741478031,0.215567992932842,0.378212160335639,0.175951124163949,0.219195732427575,0.278047249225598,0.348252166522167,0.411564272815887,0,0.702213187313235,1.02939162845886,1.13665399758237,0.828503090142008,0.234526059981096,0.540186184383045,0.710234206755631,0.393528463494808,0.617068451549513,0.232533944750408,0,0.934122738937356,0.658239399653922,0.985004784474571,0.405344047729279,0.292399974850665,0.219550115291051,0,1.68231958851302,1.3377599609307,0,0.264450566663544,1.2797295032114,1.39342003116263,1.15980715189884,1.00841762311671,1.11189021922435,0.190225626112559,0,0.494096864172033,0.251335208800269,0.198956472041151,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0.407302655690628,0,0.420814919341911,0.442655759869801,0,0,0,0.296452627087149,0.166845105716094,0.196558995113203,0,0.202860121388503,0,0,0,0.162135226775035,0,0,1.48856379067401,0.312037673114561,0.505157755894224,0,0.482443521363367,0.923765950833023,0.757965647081939,0.814824882210129,0.509235257325564,1.17345124144251,0.837531287209079,0.476087281772027,0.780534591431195,0.630540576424764,0.44292937929755,1.2756381492599,0.327726629431476,0.172684981865896,0.289298117163023,0,0,0,0.275936746304732,0.963303539926752,2.10981035865966,0.163934945376675,0.504941854408746,2.2085575359138,1.95219372148319,1.93881057959519,0.238968797952552,1.78238939265915,1.41538265394416,0.404810701674894,2.63030272120181,2.37172666767914,1.60660658210904,0.99358059645788,0.534196811001766,1.95464351224291,1.64970122972535,0,0.242780636154981,0.604647113929502,0,0,0.307435147943927,1.03371317267288,0.363533729477506,0.356497378384721,0,0,0,1.02131881726136,0.720244376125241,0.646793418913773,1.28602221018955,1.41872186913819,0.535106452806212,1.15184314421485,0.608929898229199,0.469343416127421,0.63549621259146,0,0.49465875882444,0.161464426695906,0.663442174209714,0.477489376012546,0.656563598980245,0,1.48340241608408,0,0,0,0,0,0,3.39956859987711,3.21888340344413,2.76399947608848,0,0.790839983952838,1.21991680276109,0.432021363287205,0.418176592028937,0.87345025498471,0.134864346384821,0.165306911450672,0.523511883968059,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0.388902376688095,0.258319646955462,0.168956125490778,0.234714477291508,0.651021924219751,0,0,0,0,0.202725215290164,0.513554785824136,0.129920822977795,0,0,0.120195449519969,0,0,0.0762068066549998,0.100826185136841,0.194915761479505,0,0,0.226730383615211,0,0.0897138566094757,0,0.19318959403219,0.93841237725591,0.183151624267265,1.50057865355346,0,1.12950368523413,2.30162618253588,1.71868654031819,1.20297227640581,2.05524755931193,1.5107877947794,4.05013500139084,3.15224842256954,3.62513927187364,2.5888015587591,0.415149390336707,0.798049746802062,0.170733605754134,0,0,0,0.222246727801615,0.618105171716683,0.64183841918363,0.758091635291392,0.760437899670719,0.754505365544305,0.468207537349412,0.512201219238954,0.516919220600519,0.952587382566147,0.463537303779422,0.192909220463705,0.824171801606613,0.588795680537589,0.342869252385415,0.177475806159338,0.476872379894642,0.145346416632329,0.470546902076653,0.169229215783353,0.548783918618318,1.05227884575137,0.135804113845862,0.561142271657738,0.118635018124174,0,0.409231043169689,0.77468420592983,0.192906610981141,1.24905288968973,0.935726433781634,0.859484216193193,0.191288332068843,0.882365676478062,0.463735671240843 | |||
|short_description=p3@Samd5 | |||
}} |
Latest revision as of 14:44, 26 September 2015
Short description: | p3@Samd5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Samd5_5end |
Coexpression cluster: | NA |
Association with transcript: | -191bp_to_ENSMUST00000100070, NM_177271, uc007eiw.1_5end |
EntrezGene: | Samd5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.71e-12 | 43 |
ectodermal cell | 4.83e-12 | 44 |
neurectodermal cell | 4.83e-12 | 44 |
neuron | 9.57e-11 | 33 |
neuronal stem cell | 9.57e-11 | 33 |
neuroblast | 9.57e-11 | 33 |
electrically signaling cell | 9.57e-11 | 33 |
electrically responsive cell | 2.31e-09 | 39 |
electrically active cell | 2.31e-09 | 39 |