FFCP PHASE1:Mm9::chr11:69373726..69373737,-: Difference between revisions
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{{FFCP|EntrezGene=13643|HGNC=|MCL_coexpression_id=22|UniProt=O35393,Q543Q7|association_with_transcript=1bp_to_NM_007911,uc007jqi.2_5end|description=CAGE_peak_3_at_Efnb3_5end|id=chr11:69373726..69373737,-|ontology_enrichment_celltype=CL:0000117!1.43e-16!23;CL:0000337!1.43e-16!23;CL:0000540!4.01e-12!33;CL:0000047!4.01e-12!33;CL:0000031!4.01e-12!33;CL:0000404!4.01e-12!33;CL:0000221!1.65e-08!44;CL:0000133!1.65e-08!44;CL:0002319!2.44e-08!43;CL:0000393!3.99e-08!39;CL:0000211!3.99e-08!39|ontology_enrichment_celltype_v019_2=CL:0000117,2.59e-24,23;CL:0000337,2.59e-24,23;CL:0000540,1.30e-15,33;CL:0000047,1.30e-15,33;CL:0000031,1.30e-15,33;CL:0000404,1.30e-15,33;CL:0000393,7.16e-12,39;CL:0000211,7.16e-12,39;CL:0002319,7.99e-11,43;CL:0000221,2.19e-10,44;CL:0000133,2.19e-10,44;CL:0002609,9.72e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!5.51e-21!73;UBERON:0005743!5.51e-21!73;UBERON:0001049!5.93e-21!52;UBERON:0005068!5.93e-21!52;UBERON:0006241!5.93e-21!52;UBERON:0007135!5.93e-21!52;UBERON:0002346!1.06e-19!71;UBERON:0003075!1.06e-19!71;UBERON:0007284!1.06e-19!71;UBERON:0000073!1.33e-19!75;UBERON:0001016!1.33e-19!75;UBERON:0000955!7.08e-19!50;UBERON:0006238!7.08e-19!50;UBERON:0000033!7.42e-19!63;UBERON:0003056!2.44e-18!49;UBERON:0002616!2.46e-18!49;UBERON:0003080!1.91e-17!40;UBERON:0002020!3.87e-17!34;UBERON:0002780!4.35e-17!39;UBERON:0001890!4.35e-17!39;UBERON:0006240!4.35e-17!39;UBERON:0004121!4.79e-16!102;UBERON:0000924!4.79e-16!102;UBERON:0006601!4.79e-16!102;UBERON:0002791!1.35e-13!29;UBERON:0003528!1.35e-13!29;UBERON:0001893!1.35e-13!29;UBERON:0000153!6.09e-10!94;UBERON:0000025!3.44e-09!114;UBERON:0007811!2.08e-08!86;UBERON:0000956!2.71e-08!21;UBERON:0001869!2.71e-08!21;UBERON:0000203!2.71e-08!21;UBERON:0004111!5.00e-08!122;UBERON:0002420!5.67e-07!8;UBERON:0007245!5.67e-07!8;UBERON:0010009!5.67e-07!8;UBERON:0010011!5.67e-07!8;UBERON:0000454!5.67e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.52e-29,54;UBERON:0001049,4.92e-28,52;UBERON:0005068,4.92e-28,52;UBERON:0006241,4.92e-28,52;UBERON:0007135,4.92e-28,52;UBERON:0001017,6.57e-27,73;UBERON:0001016,1.02e-25,75;UBERON:0003080,1.82e-24,40;UBERON:0002780,6.34e-24,39;UBERON:0001890,6.34e-24,39;UBERON:0006240,6.34e-24,39;UBERON:0002020,1.92e-23,34;UBERON:0002346,5.57e-23,64;UBERON:0003075,5.57e-23,64;UBERON:0007284,5.57e-23,64;UBERON:0000955,5.96e-23,47;UBERON:0006238,5.96e-23,47;UBERON:0002616,3.62e-22,46;UBERON:0010314,1.46e-21,92;UBERON:0003056,6.74e-21,49;UBERON:0004121,4.94e-19,95;UBERON:0000924,4.94e-19,95;UBERON:0006601,4.94e-19,95;UBERON:0010371,2.95e-18,73;UBERON:0003528,3.66e-18,29;UBERON:0002791,3.66e-18,29;UBERON:0001893,3.66e-18,29;UBERON:0000025,8.26e-13,114;UBERON:0004111,6.63e-11,122;UBERON:0000956,2.35e-10,21;UBERON:0001869,2.35e-10,21;UBERON:0000203,2.35e-10,21;UBERON:0002420,9.07e-10,8;UBERON:0007245,9.07e-10,8;UBERON:0010009,9.07e-10,8;UBERON:0010011,9.07e-10,8;UBERON:0000454,9.07e-10,8;UBERON:0002240,3.60e-07,6;UBERON:0005174,3.60e-07,6;UBERON:0001137,3.60e-07,6;UBERON:0000369,4.33e-07,5;UBERON:0002435,4.33e-07,5;UBERON:0000204,4.33e-07,5;UBERON:0010082,4.33e-07,5;UBERON:0002619,4.66e-07,17;UBERON:0001948,9.55e-07,5;UBERON:0002315,9.55e-07,5|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.218025156380447,0,0,0.279972843250725,0,0,0,0,0,0,0,6.87875966922632,7.93486468908049,7.60597684207415,0.677689064138264,0,0,0,0,0,1.15265491596466,4.87341177849845,6.21027316325777,5.46844899513593,5.99867067247988,6.40518768759679,7.10446635446733,6.42164655822184,8.27296907949019,2.20231761998777,1.91531007127782,1.22885226604995,9.23204014111357,9.33173964744578,8.85552729946492,3.07101298901519,3.37657566019008,3.20876320331301,7.95497180778903,4.9830088279686,7.82877672466262,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.845060518660083,0,0,0,0,0,0,0,0,0,0.693941307064543,0.304465478312141,0.230615497256059,0.60289056221049,0.705532242814229,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,1.3481157546434,4.11750542536764,20.2303506901712,2.25971616249959,1.79000820131231,2.49345653471472,3.89379031362618,1.42575109390443,0,0,0.631325567659422,1.04096354370163,0.459804208866946,1.0803727788321,0.30140963567143,1.15662048557257,0.640568601424249,0.937017245597288,0.776110112217047,1.29340795759705,0.945530400839096,2.99116911078713,3.06874025398605,2.50242524303038,0.348252166522167,0.61734640922383,0.59710280045548,0,0,0,1.65700618028402,2.34526059981096,2.34080679899319,2.3674473558521,1.77087808572663,0.925602677324269,1.39520366850245,1.07309360559848,2.10177616260905,3.62031669809657,0.985004784474571,0.972825714550269,1.16959989940266,1.09775057645525,0.536825675041487,4.6263788684108,10.1875566255492,0,0,0.426576501070468,0.232236671860439,0.515469845288373,0,0.889512175379481,0,0,0.494096864172033,0.251335208800269,0.397912944082302,0.19496408711912,0,0,0,1.13800740571849,0.11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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=13643 | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=O35393,Q543Q7 | |||
|association_with_transcript=1bp_to_NM_007911,uc007jqi.2_5end | |||
|cluster_id=chr11:69373726..69373737,- | |||
|description=CAGE_peak_3_at_Efnb3_5end | |||
|id=chr11:69373726..69373737,- | |||
|ontology_enrichment_celltype=CL:0000117!1.43e-16!23;CL:0000337!1.43e-16!23;CL:0000540!4.01e-12!33;CL:0000047!4.01e-12!33;CL:0000031!4.01e-12!33;CL:0000404!4.01e-12!33;CL:0000221!1.65e-08!44;CL:0000133!1.65e-08!44;CL:0002319!2.44e-08!43;CL:0000393!3.99e-08!39;CL:0000211!3.99e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.59e-24,23;CL:0000337,2.59e-24,23;CL:0000540,1.30e-15,33;CL:0000047,1.30e-15,33;CL:0000031,1.30e-15,33;CL:0000404,1.30e-15,33;CL:0000393,7.16e-12,39;CL:0000211,7.16e-12,39;CL:0002319,7.99e-11,43;CL:0000221,2.19e-10,44;CL:0000133,2.19e-10,44;CL:0002609,9.72e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.51e-21!73;UBERON:0005743!5.51e-21!73;UBERON:0001049!5.93e-21!52;UBERON:0005068!5.93e-21!52;UBERON:0006241!5.93e-21!52;UBERON:0007135!5.93e-21!52;UBERON:0002346!1.06e-19!71;UBERON:0003075!1.06e-19!71;UBERON:0007284!1.06e-19!71;UBERON:0000073!1.33e-19!75;UBERON:0001016!1.33e-19!75;UBERON:0000955!7.08e-19!50;UBERON:0006238!7.08e-19!50;UBERON:0000033!7.42e-19!63;UBERON:0003056!2.44e-18!49;UBERON:0002616!2.46e-18!49;UBERON:0003080!1.91e-17!40;UBERON:0002020!3.87e-17!34;UBERON:0002780!4.35e-17!39;UBERON:0001890!4.35e-17!39;UBERON:0006240!4.35e-17!39;UBERON:0004121!4.79e-16!102;UBERON:0000924!4.79e-16!102;UBERON:0006601!4.79e-16!102;UBERON:0002791!1.35e-13!29;UBERON:0003528!1.35e-13!29;UBERON:0001893!1.35e-13!29;UBERON:0000153!6.09e-10!94;UBERON:0000025!3.44e-09!114;UBERON:0007811!2.08e-08!86;UBERON:0000956!2.71e-08!21;UBERON:0001869!2.71e-08!21;UBERON:0000203!2.71e-08!21;UBERON:0004111!5.00e-08!122;UBERON:0002420!5.67e-07!8;UBERON:0007245!5.67e-07!8;UBERON:0010009!5.67e-07!8;UBERON:0010011!5.67e-07!8;UBERON:0000454!5.67e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.52e-29,54;UBERON:0001049,4.92e-28,52;UBERON:0005068,4.92e-28,52;UBERON:0006241,4.92e-28,52;UBERON:0007135,4.92e-28,52;UBERON:0001017,6.57e-27,73;UBERON:0001016,1.02e-25,75;UBERON:0003080,1.82e-24,40;UBERON:0002780,6.34e-24,39;UBERON:0001890,6.34e-24,39;UBERON:0006240,6.34e-24,39;UBERON:0002020,1.92e-23,34;UBERON:0002346,5.57e-23,64;UBERON:0003075,5.57e-23,64;UBERON:0007284,5.57e-23,64;UBERON:0000955,5.96e-23,47;UBERON:0006238,5.96e-23,47;UBERON:0002616,3.62e-22,46;UBERON:0010314,1.46e-21,92;UBERON:0003056,6.74e-21,49;UBERON:0004121,4.94e-19,95;UBERON:0000924,4.94e-19,95;UBERON:0006601,4.94e-19,95;UBERON:0010371,2.95e-18,73;UBERON:0003528,3.66e-18,29;UBERON:0002791,3.66e-18,29;UBERON:0001893,3.66e-18,29;UBERON:0000025,8.26e-13,114;UBERON:0004111,6.63e-11,122;UBERON:0000956,2.35e-10,21;UBERON:0001869,2.35e-10,21;UBERON:0000203,2.35e-10,21;UBERON:0002420,9.07e-10,8;UBERON:0007245,9.07e-10,8;UBERON:0010009,9.07e-10,8;UBERON:0010011,9.07e-10,8;UBERON:0000454,9.07e-10,8;UBERON:0002240,3.60e-07,6;UBERON:0005174,3.60e-07,6;UBERON:0001137,3.60e-07,6;UBERON:0000369,4.33e-07,5;UBERON:0002435,4.33e-07,5;UBERON:0000204,4.33e-07,5;UBERON:0010082,4.33e-07,5;UBERON:0002619,4.66e-07,17;UBERON:0001948,9.55e-07,5;UBERON:0002315,9.55e-07,5 | |||
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|short_description=p3@Efnb3 | |||
}} |
Latest revision as of 00:20, 2 October 2015
Short description: | p3@Efnb3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Efnb3_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 1bp_to_NM_007911, uc007jqi.2_5end |
EntrezGene: | Efnb3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.59e-24 | 23 |
neuroblast (sensu Vertebrata) | 2.59e-24 | 23 |
neuron | 1.30e-15 | 33 |
neuronal stem cell | 1.30e-15 | 33 |
neuroblast | 1.30e-15 | 33 |
electrically signaling cell | 1.30e-15 | 33 |
electrically responsive cell | 7.16e-12 | 39 |
electrically active cell | 7.16e-12 | 39 |
neural cell | 7.99e-11 | 43 |
ectodermal cell | 2.19e-10 | 44 |
neurectodermal cell | 2.19e-10 | 44 |
neuron of cerebral cortex | 9.72e-08 | 6 |