FFCP PHASE1:Mm9::chr11:74403567..74403651,-: Difference between revisions
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{{FFCP|EntrezGene=380711|HGNC=|MCL_coexpression_id=1|UniProt=Q5SUE5|association_with_transcript=0bp_to_ENSMUST00000145524_5end|description=CAGE_peak_1_at_Rap1gap2_5end|id=chr11:74403567..74403651,-|ontology_enrichment_celltype=CL:0000117!5.97e-17!23;CL:0000337!5.97e-17!23;CL:0000540!8.99e-11!33;CL:0000047!8.99e-11!33;CL:0000031!8.99e-11!33;CL:0000404!8.99e-11!33;CL:0000393!1.07e-07!39;CL:0000211!1.07e-07!39;CL:0000221!2.14e-07!44;CL:0000133!2.14e-07!44;CL:0002319!2.88e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,2.82e-26,23;CL:0000337,2.82e-26,23;CL:0000540,1.21e-17,33;CL:0000047,1.21e-17,33;CL:0000031,1.21e-17,33;CL:0000404,1.21e-17,33;CL:0000393,7.64e-14,39;CL:0000211,7.64e-14,39;CL:0002319,6.43e-12,43;CL:0000221,1.71e-11,44;CL:0000133,1.71e-11,44;CL:0002609,9.10e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!3.05e-27!52;UBERON:0005068!3.05e-27!52;UBERON:0006241!3.05e-27!52;UBERON:0007135!3.05e-27!52;UBERON:0000955!3.70e-26!50;UBERON:0006238!3.70e-26!50;UBERON:0002616!2.27e-25!49;UBERON:0000033!2.28e-25!63;UBERON:0000073!8.83e-25!75;UBERON:0001016!8.83e-25!75;UBERON:0001017!2.64e-24!73;UBERON:0005743!2.64e-24!73;UBERON:0002346!3.07e-24!71;UBERON:0003075!3.07e-24!71;UBERON:0007284!3.07e-24!71;UBERON:0002020!4.69e-23!34;UBERON:0004121!8.23e-23!102;UBERON:0000924!8.23e-23!102;UBERON:0006601!8.23e-23!102;UBERON:0003056!1.38e-22!49;UBERON:0003080!2.78e-21!40;UBERON:0002780!1.92e-20!39;UBERON:0001890!1.92e-20!39;UBERON:0006240!1.92e-20!39;UBERON:0002791!1.61e-19!29;UBERON:0003528!1.61e-19!29;UBERON:0001893!1.61e-19!29;UBERON:0007811!3.74e-14!86;UBERON:0000956!3.83e-13!21;UBERON:0001869!3.83e-13!21;UBERON:0000203!3.83e-13!21;UBERON:0000153!2.57e-11!94;UBERON:0002619!1.11e-10!17;UBERON:0002021!6.18e-10!10;UBERON:0000411!6.18e-10!10;UBERON:0001950!6.18e-10!10;UBERON:0002420!1.17e-07!8;UBERON:0007245!1.17e-07!8;UBERON:0010009!1.17e-07!8;UBERON:0010011!1.17e-07!8;UBERON:0000454!1.17e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.43e-39,54;UBERON:0002020,5.29e-37,34;UBERON:0001049,1.84e-36,52;UBERON:0005068,1.84e-36,52;UBERON:0006241,1.84e-36,52;UBERON:0007135,1.84e-36,52;UBERON:0001017,1.92e-35,73;UBERON:0001016,4.06e-34,75;UBERON:0003528,2.76e-31,29;UBERON:0002791,2.76e-31,29;UBERON:0001893,2.76e-31,29;UBERON:0000955,8.60e-31,47;UBERON:0006238,8.60e-31,47;UBERON:0002616,1.30e-29,46;UBERON:0002346,2.79e-27,64;UBERON:0003075,2.79e-27,64;UBERON:0007284,2.79e-27,64;UBERON:0003080,2.43e-26,40;UBERON:0002780,4.49e-25,39;UBERON:0001890,4.49e-25,39;UBERON:0006240,4.49e-25,39;UBERON:0004121,5.96e-24,95;UBERON:0000924,5.96e-24,95;UBERON:0006601,5.96e-24,95;UBERON:0010371,2.12e-22,73;UBERON:0000956,5.76e-21,21;UBERON:0001869,5.76e-21,21;UBERON:0000203,5.76e-21,21;UBERON:0003056,9.69e-20,49;UBERON:0002619,5.36e-17,17;UBERON:0010314,2.68e-15,92;UBERON:0002021,5.35e-15,10;UBERON:0000411,5.35e-15,10;UBERON:0001950,5.35e-15,10;UBERON:0002420,2.39e-11,8;UBERON:0007245,2.39e-11,8;UBERON:0010009,2.39e-11,8;UBERON:0010011,2.39e-11,8;UBERON:0000454,2.39e-11,8;UBERON:0003076,3.42e-10,12;UBERON:0003057,3.42e-10,12;UBERON:0000025,3.87e-10,114;UBERON:0004111,9.34e-09,122;UBERON:0002240,9.05e-08,6;UBERON:0005174,9.05e-08,6;UBERON:0001137,9.05e-08,6;UBERON:0000369,2.94e-07,5;UBERON:0002435,2.94e-07,5;UBERON:0000204,2.94e-07,5;UBERON:0010082,2.94e-07,5;UBERON:0002950,6.04e-07,4;UBERON:0001891,6.04e-07,4;UBERON:0009616,6.04e-07,4;UBERON:0010286,6.04e-07,4|phase1_expression=0,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.656861476496,0,0,0,0.22940928106717,0,0,0.215471232685889,0.190023419456374,0,0,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.08107613008592,4.7609188134483,3.80298842103708,0,0,0,0,0,0,0,1.34796496001021,2.56511282830212,1.26194976810829,6.85562362569129,7.73039893330647,5.38959516545798,5.84657373211242,2.75765635983006,12.1127469099328,20.6853487698004,17.9719643909805,8.17694983927202,13.5401712531566,6.77187381723788,20.9387249251036,22.5105044012672,18.0301932376636,6.48182888042069,7.54569908235246,8.01517617048792,0.075726193333184,0.529000920747499,0,0,0,0,0,0,0.702222100658759,0,0,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0.150722640552623,0.352766121407114,0,0,0.144599356919912,0,0,0,0,0,14.9318206475889,17.8029700791437,0,0,0,0,16.3271796951257,14.640019290196,17.7172636479139,27.2904182701874,25.3158302757027,13.714010940931,18.6577452527921,0,0,0,0.210441855886474,0,0.459804208866946,0.360124259610698,0.60281927134286,0.680364991513279,0.640568601424249,0.468508622798644,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162137619091711,0,0,0,13.4585567081041,3.80747065803352,0.330418782983798,0,0,0,0.128867461322093,0,0,0,0.474529061544512,0,0.251335208800269,0,0.19496408711912,0,0,0.597423819763102,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.1284519189257,16.2924244363162,0,0,0.315508219416257,0,0,0,0,0,0,0,1.18586333383957,11.8888887076069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0.18006109403131,0.258717367565509,0,0,0.535106452806212,0.658196082408484,0.304464949114599,0,0,0.661585194164886,0.32977250588296,0,0.180938774784468,0.358117032009409,0.492422699235184,0,10.198391610578,0,0.206386867963223,0,0,0.136694227721025,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0,0.247960367176008,0,0.129614973291793,0,0,0,0,0,0,0,0,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0,0,0,0,14.6835479080437,11.0478056761722,15.4681788628637,13.9201077698387,23.9778881919725,29.4603619981983,24.9758325085768,27.9199145999017,21.2976932222576,34.6899408873719,0.207574695168353,0,1.19513524027894,1.21553358534147,1.04806581313991,0.551530525350042,1.77797382241292,0.412070114477788,1.92551525755089,0.505394423527595,1.52087579934144,1.32038438970253,1.03005658216871,0.960377286073039,1.14870937911227,1.42888107384922,0.811190281613988,0.964546102318525,1.23625770240992,0.883193520806384,0,0.887379030796687,0.953744759789284,1.0174249164263,0.752875043322645,1.35383372626682,1.09756783723664,1.05227884575137,1.49384525230448,1.12228454331548,1.30498519936592,1.0835493061312,2.04615521584845,0.929621047115796,0.964533054905707,3.49734809113124,0.467863216890817,0.859484216193193,0.765153328275374,0.220591419119515,0|short_description=p1@Rap1gap2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=380711 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q5SUE5 | |||
|association_with_transcript=0bp_to_ENSMUST00000145524_5end | |||
|cluster_id=chr11:74403567..74403651,- | |||
|description=CAGE_peak_1_at_Rap1gap2_5end | |||
|id=chr11:74403567..74403651,- | |||
|ontology_enrichment_celltype=CL:0000117!5.97e-17!23;CL:0000337!5.97e-17!23;CL:0000540!8.99e-11!33;CL:0000047!8.99e-11!33;CL:0000031!8.99e-11!33;CL:0000404!8.99e-11!33;CL:0000393!1.07e-07!39;CL:0000211!1.07e-07!39;CL:0000221!2.14e-07!44;CL:0000133!2.14e-07!44;CL:0002319!2.88e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.82e-26,23;CL:0000337,2.82e-26,23;CL:0000540,1.21e-17,33;CL:0000047,1.21e-17,33;CL:0000031,1.21e-17,33;CL:0000404,1.21e-17,33;CL:0000393,7.64e-14,39;CL:0000211,7.64e-14,39;CL:0002319,6.43e-12,43;CL:0000221,1.71e-11,44;CL:0000133,1.71e-11,44;CL:0002609,9.10e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.05e-27!52;UBERON:0005068!3.05e-27!52;UBERON:0006241!3.05e-27!52;UBERON:0007135!3.05e-27!52;UBERON:0000955!3.70e-26!50;UBERON:0006238!3.70e-26!50;UBERON:0002616!2.27e-25!49;UBERON:0000033!2.28e-25!63;UBERON:0000073!8.83e-25!75;UBERON:0001016!8.83e-25!75;UBERON:0001017!2.64e-24!73;UBERON:0005743!2.64e-24!73;UBERON:0002346!3.07e-24!71;UBERON:0003075!3.07e-24!71;UBERON:0007284!3.07e-24!71;UBERON:0002020!4.69e-23!34;UBERON:0004121!8.23e-23!102;UBERON:0000924!8.23e-23!102;UBERON:0006601!8.23e-23!102;UBERON:0003056!1.38e-22!49;UBERON:0003080!2.78e-21!40;UBERON:0002780!1.92e-20!39;UBERON:0001890!1.92e-20!39;UBERON:0006240!1.92e-20!39;UBERON:0002791!1.61e-19!29;UBERON:0003528!1.61e-19!29;UBERON:0001893!1.61e-19!29;UBERON:0007811!3.74e-14!86;UBERON:0000956!3.83e-13!21;UBERON:0001869!3.83e-13!21;UBERON:0000203!3.83e-13!21;UBERON:0000153!2.57e-11!94;UBERON:0002619!1.11e-10!17;UBERON:0002021!6.18e-10!10;UBERON:0000411!6.18e-10!10;UBERON:0001950!6.18e-10!10;UBERON:0002420!1.17e-07!8;UBERON:0007245!1.17e-07!8;UBERON:0010009!1.17e-07!8;UBERON:0010011!1.17e-07!8;UBERON:0000454!1.17e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.43e-39,54;UBERON:0002020,5.29e-37,34;UBERON:0001049,1.84e-36,52;UBERON:0005068,1.84e-36,52;UBERON:0006241,1.84e-36,52;UBERON:0007135,1.84e-36,52;UBERON:0001017,1.92e-35,73;UBERON:0001016,4.06e-34,75;UBERON:0003528,2.76e-31,29;UBERON:0002791,2.76e-31,29;UBERON:0001893,2.76e-31,29;UBERON:0000955,8.60e-31,47;UBERON:0006238,8.60e-31,47;UBERON:0002616,1.30e-29,46;UBERON:0002346,2.79e-27,64;UBERON:0003075,2.79e-27,64;UBERON:0007284,2.79e-27,64;UBERON:0003080,2.43e-26,40;UBERON:0002780,4.49e-25,39;UBERON:0001890,4.49e-25,39;UBERON:0006240,4.49e-25,39;UBERON:0004121,5.96e-24,95;UBERON:0000924,5.96e-24,95;UBERON:0006601,5.96e-24,95;UBERON:0010371,2.12e-22,73;UBERON:0000956,5.76e-21,21;UBERON:0001869,5.76e-21,21;UBERON:0000203,5.76e-21,21;UBERON:0003056,9.69e-20,49;UBERON:0002619,5.36e-17,17;UBERON:0010314,2.68e-15,92;UBERON:0002021,5.35e-15,10;UBERON:0000411,5.35e-15,10;UBERON:0001950,5.35e-15,10;UBERON:0002420,2.39e-11,8;UBERON:0007245,2.39e-11,8;UBERON:0010009,2.39e-11,8;UBERON:0010011,2.39e-11,8;UBERON:0000454,2.39e-11,8;UBERON:0003076,3.42e-10,12;UBERON:0003057,3.42e-10,12;UBERON:0000025,3.87e-10,114;UBERON:0004111,9.34e-09,122;UBERON:0002240,9.05e-08,6;UBERON:0005174,9.05e-08,6;UBERON:0001137,9.05e-08,6;UBERON:0000369,2.94e-07,5;UBERON:0002435,2.94e-07,5;UBERON:0000204,2.94e-07,5;UBERON:0010082,2.94e-07,5;UBERON:0002950,6.04e-07,4;UBERON:0001891,6.04e-07,4;UBERON:0009616,6.04e-07,4;UBERON:0010286,6.04e-07,4 | |||
|phase1_expression=0,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.656861476496,0,0,0,0.22940928106717,0,0,0.215471232685889,0.190023419456374,0,0,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.08107613008592,4.7609188134483,3.80298842103708,0,0,0,0,0,0,0,1.34796496001021,2.56511282830212,1.26194976810829,6.85562362569129,7.73039893330647,5.38959516545798,5.84657373211242,2.75765635983006,12.1127469099328,20.6853487698004,17.9719643909805,8.17694983927202,13.5401712531566,6.77187381723788,20.9387249251036,22.5105044012672,18.0301932376636,6.48182888042069,7.54569908235246,8.01517617048792,0.075726193333184,0.529000920747499,0,0,0,0,0,0,0.702222100658759,0,0,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0.150722640552623,0.352766121407114,0,0,0.144599356919912,0,0,0,0,0,14.9318206475889,17.8029700791437,0,0,0,0,16.3271796951257,14.640019290196,17.7172636479139,27.2904182701874,25.3158302757027,13.714010940931,18.6577452527921,0,0,0,0.210441855886474,0,0.459804208866946,0.360124259610698,0.60281927134286,0.680364991513279,0.640568601424249,0.468508622798644,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162137619091711,0,0,0,13.4585567081041,3.80747065803352,0.330418782983798,0,0,0,0.128867461322093,0,0,0,0.474529061544512,0,0.251335208800269,0,0.19496408711912,0,0,0.597423819763102,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.1284519189257,16.2924244363162,0,0,0.315508219416257,0,0,0,0,0,0,0,1.18586333383957,11.8888887076069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0.18006109403131,0.258717367565509,0,0,0.535106452806212,0.658196082408484,0.304464949114599,0,0,0.661585194164886,0.32977250588296,0,0.180938774784468,0.358117032009409,0.492422699235184,0,10.198391610578,0,0.206386867963223,0,0,0.136694227721025,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0,0.247960367176008,0,0.129614973291793,0,0,0,0,0,0,0,0,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0,0,0,0,14.6835479080437,11.0478056761722,15.4681788628637,13.9201077698387,23.9778881919725,29.4603619981983,24.9758325085768,27.9199145999017,21.2976932222576,34.6899408873719,0.207574695168353,0,1.19513524027894,1.21553358534147,1.04806581313991,0.551530525350042,1.77797382241292,0.412070114477788,1.92551525755089,0.505394423527595,1.52087579934144,1.32038438970253,1.03005658216871,0.960377286073039,1.14870937911227,1.42888107384922,0.811190281613988,0.964546102318525,1.23625770240992,0.883193520806384,0,0.887379030796687,0.953744759789284,1.0174249164263,0.752875043322645,1.35383372626682,1.09756783723664,1.05227884575137,1.49384525230448,1.12228454331548,1.30498519936592,1.0835493061312,2.04615521584845,0.929621047115796,0.964533054905707,3.49734809113124,0.467863216890817,0.859484216193193,0.765153328275374,0.220591419119515,0 | |||
|short_description=p1@Rap1gap2 | |||
}} |
Latest revision as of 15:51, 25 September 2015
Short description: | p1@Rap1gap2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rap1gap2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000145524_5end |
EntrezGene: | Rap1gap2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.82e-26 | 23 |
neuroblast (sensu Vertebrata) | 2.82e-26 | 23 |
neuron | 1.21e-17 | 33 |
neuronal stem cell | 1.21e-17 | 33 |
neuroblast | 1.21e-17 | 33 |
electrically signaling cell | 1.21e-17 | 33 |
electrically responsive cell | 7.64e-14 | 39 |
electrically active cell | 7.64e-14 | 39 |
neural cell | 6.43e-12 | 43 |
ectodermal cell | 1.71e-11 | 44 |
neurectodermal cell | 1.71e-11 | 44 |
neuron of cerebral cortex | 9.10e-07 | 6 |