FFCP PHASE1:Hg19::chr4:103940791..103940883,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=150159 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24244 | |||
|TSSclassifier=strong | |||
|UniProt=E7EVG3,D6RA80,D6RGI9,D6RFK4 | |||
|association_with_transcript=0bp_to_ENST00000394789,ENST00000452285,ENST00000503584,ENST00000504216,ENST00000510559,ENST00000514972,uc003hwu.2,uc003hwv.2,uc003hww.2,uc010ilm.2,uc011cev.1_5end | |||
|cluster_id=chr4:103940791..103940883,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_1_at_SLC9B1_5end | |||
|id=chr4:103940791..103940883,- | |||
|ontology_enrichment_celltype=CL:0000037!1.35e-28!172;CL:0000566!1.35e-28!172;CL:0000988!7.42e-28!182;CL:0000738!7.58e-28!140;CL:0002032!1.32e-25!165;CL:0000837!1.32e-25!165;CL:0002031!6.54e-25!124;CL:0002087!1.33e-24!119;CL:0000542!1.74e-21!53;CL:0000051!1.74e-21!53;CL:0000838!2.66e-21!52;CL:0000791!3.52e-11!18;CL:0000789!3.52e-11!18;CL:0002420!3.52e-11!18;CL:0002419!3.52e-11!18;CL:0000790!3.52e-11!18;CL:0000084!9.23e-11!25;CL:0000827!9.23e-11!25;CL:0000945!2.16e-10!24;CL:0000826!2.16e-10!24;CL:0000763!2.60e-08!112;CL:0000049!2.60e-08!112;CL:0000236!3.60e-08!14;CL:0000625!9.36e-08!11;CL:0000557!2.04e-07!71;CL:0000839!8.73e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.49e-13;53!CL:0000791;2.33e-12;18!CL:0000789;2.33e-12;18!CL:0002419;2.33e-12;18!CL:0000945;2.41e-11;24!CL:0000084;3.17e-11;25!CL:0002087;1.08e-09;104!CL:0000236;5.29e-09;13!CL:0000625;1.48e-08;11!CL:0000738;7.16e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.40e-33,136;CL:0000988,4.36e-32,177;CL:0000037,5.14e-32,168;CL:0002087,3.36e-29,115;CL:0002031,3.95e-29,120;CL:0002032,1.23e-28,161;CL:0000837,1.23e-28,161;CL:0000542,2.53e-23,53;CL:0000051,2.53e-23,53;CL:0000838,4.09e-23,52;CL:0000791,2.25e-12,18;CL:0000789,2.25e-12,18;CL:0002420,2.25e-12,18;CL:0002419,2.25e-12,18;CL:0000790,2.25e-12,18;CL:0000945,1.72e-11,24;CL:0000826,1.72e-11,24;CL:0000084,2.80e-11,25;CL:0000827,2.80e-11,25;CL:0000557,1.74e-09,67;CL:0000763,2.31e-09,108;CL:0000049,2.31e-09,108;CL:0000236,5.40e-09,14;CL:0000625,1.58e-08,11;CL:0000766,1.82e-08,72;CL:0000839,1.88e-08,66;CL:0002009,9.79e-08,61;CL:0002194,2.31e-07,59;CL:0000576,2.31e-07,59;CL:0000040,2.31e-07,59;CL:0000559,2.31e-07,59;CL:0000860,5.60e-07,42;CL:0002057,5.60e-07,42;CL:0000473,7.61e-07,48;CL:0000234,7.61e-07,48 | |||
|ontology_enrichment_development_v019=CL:0000051;1.49e-13;53!CL:0000790;2.33e-12;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.77e-18!115;UBERON:0001049!2.79e-17!57;UBERON:0005068!2.79e-17!57;UBERON:0006241!2.79e-17!57;UBERON:0007135!2.79e-17!57;UBERON:0000073!1.24e-14!94;UBERON:0001016!1.24e-14!94;UBERON:0002780!1.92e-14!41;UBERON:0001890!1.92e-14!41;UBERON:0006240!1.92e-14!41;UBERON:0005743!3.90e-14!86;UBERON:0001017!4.80e-14!82;UBERON:0003080!5.36e-14!42;UBERON:0002616!1.08e-13!59;UBERON:0000955!3.56e-12!69;UBERON:0006238!3.56e-12!69;UBERON:0002020!3.27e-11!34;UBERON:0003528!3.27e-11!34;UBERON:0001893!4.15e-11!34;UBERON:0002390!8.08e-11!102;UBERON:0003061!8.08e-11!102;UBERON:0002791!8.31e-11!33;UBERON:0002346!9.45e-11!90;UBERON:0001869!4.02e-10!32;UBERON:0003075!1.05e-09!86;UBERON:0007284!1.05e-09!86;UBERON:0002193!2.22e-09!112;UBERON:0003056!4.88e-08!61;UBERON:0002619!7.87e-08!22;UBERON:0000956!1.85e-07!25;UBERON:0000203!1.85e-07!25;UBERON:0001950!4.11e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;5.24e-12;41!UBERON:0001890;5.24e-12;41!UBERON:0001893;9.29e-11;34!UBERON:0003528;9.46e-11;34!UBERON:0002020;9.46e-11;34!UBERON:0000073;1.09e-10;53!UBERON:0002616;1.09e-10;53!UBERON:0002791;1.98e-10;32!UBERON:0001869;2.31e-10;32!UBERON:0002619;1.03e-08;22!UBERON:0000956;2.48e-08;25!UBERON:0000203;2.48e-08;25!UBERON:0001950;7.48e-08;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.85e-19,56;UBERON:0005068,1.85e-19,56;UBERON:0006241,1.85e-19,56;UBERON:0007135,1.85e-19,56;UBERON:0007023,5.25e-18,114;UBERON:0000073,7.41e-18,53;UBERON:0002616,7.41e-18,53;UBERON:0002780,4.29e-16,41;UBERON:0001890,4.29e-16,41;UBERON:0003080,4.29e-16,41;UBERON:0006240,4.29e-16,41;UBERON:0001016,1.25e-15,89;UBERON:0001017,3.13e-15,81;UBERON:0002390,2.38e-13,98;UBERON:0003061,2.38e-13,98;UBERON:0002346,2.54e-13,86;UBERON:0000955,3.92e-13,68;UBERON:0006238,3.92e-13,68;UBERON:0003528,1.86e-12,34;UBERON:0002020,1.86e-12,34;UBERON:0001893,2.43e-12,34;UBERON:0003075,4.41e-12,82;UBERON:0007284,4.41e-12,82;UBERON:0002791,2.06e-11,32;UBERON:0002193,3.08e-11,108;UBERON:0001869,3.12e-11,32;UBERON:0003056,3.15e-09,61;UBERON:0002619,1.30e-08,22;UBERON:0010371,3.00e-08,104;UBERON:0000956,3.08e-08,25;UBERON:0000203,3.08e-08,25;UBERON:0001950,8.33e-08,20;UBERON:0002371,8.35e-08,76;UBERON:0002405,1.74e-07,93;UBERON:0001474,4.82e-07,82 | |||
|phase1_expression=0.363356758541113,0,1.12763523276777,0,0.446961094427288,0,0,1.26343974685366,1.04474251279935,0.245733936501509,0.697801167972428,0,0,1.23766352960047,1.32558950291166,0.672325146451775,0,1.46062018077475,0,0.861847406537515,0.612002073732759,0,3.72106783270374,0.273748850145768,2.38531015230125,1.98674854944673,2.54511827294832,2.44003422072406,4.72037132218685,4.22212337906934,3.2511385896376,0,0,2.21852406100073,3.40855682553327,6.96629239188365,2.64240395401362,13.2958898047651,10.8294001633877,5.859293509328,3.35873211359887,5.18229865630367,2.31818010870768,0.872389432677388,0,1.21292030593908,1.62700325833979,2.05583944010913,1.85823822537062,4.02769349251011,3.33008918487831,2.83778675866302,2.41321976515633,5.80936215225443,4.06279459783025,1.31769637679823,1.36453075028923,1.12361742222542,8.57034898638527,6.09765151444578,3.83602275479425,0.989553900560148,2.19410023383795,1.27867425159808,5.80418477257168,7.94339314567596,8.09668923694247,1.25624332628372,1.0429658368404,2.38907729175628,3.02699751316684,5.15588690382591,4.74693581161327,3.16882929467913,3.61427309940574,2.93522103711726,1.79725809834392,1.50176892841506,1.44653028027372,2.56511469367124,1.59133341759272,2.19196984517561,3.51992488922645,9.83049500271837,12.4531295540898,6.40095333849761,14.0138595462604,12.6445536789986,9.91567309177293,10.494591299889,13.6611112586268,10.5702694086769,12.6150165281326,3.96513985737078,3.36305137788922,2.10707267820062,8.26181034478099,6.6811829667358,8.22405995998037,7.02183280640848,13.0368906653436,16.0972253949809,21.4309401248702,6.12757512868455,7.36514768687093,7.97522020501036,11.9153700056607,6.40456598628376,6.63302672555379,3.61763390128087,5.80335037350282,6.95527405764126,19.1289666479058,18.1927763101005,17.7710390468461,3.62589896632212,13.4127172760672,10.6524508099615,9.61474829674111,10.8312240870193,5.20866763085135,6.65316431113862,10.9919836926774,10.3669155035079,11.2437653897111,8.28720382154059,9.03240796613151,8.46748321543876,8.02320587350522,9.99288386791313,0,0,0.383587685530591,2.53007406669196,0.50133791063589,1.44846518960824,1.5905718941022,0.486634870302636,0.945348171640679,0.665188192387692,0.263504357079378,32.9412374876747,0.364295288292542,0,1.29818957461873,1.39303789839414,1.32957960518865,9.06264372360299,8.00792875092179,9.28643753323912,0.39752481473341,1.72046919021225,0.347140501607594,1.13061588384802,0,0.825354125820202,0.208994966536811,1.03366703667732,0.71153252537342,0.66944122552934,0.805658634218294,0,0,0,0,1.16089646769304,0.673588117878509,1.57656072676651,1.53316637465883,0,0.549605231791222,3.9534125230819,0,0,0.993943903390637,0.379891534993739,2.1185468930115,2.0078563452417,0.354668382198357,0,1.06748995729705,0,0.622422070799533,0.67355336034844,0.980771418680752,0.756787138224657,0.576175924479999,0.937285727335186,0.624320153660641,0,0.448346041655403,1.996386476944,1.13311061057692,0.98315564691574,1.02077085627447,0.491337269247072,1.03325781175765,2.37600571456411,0.989067717114227,0,0.718618141816238,0.673344455816265,0.875829639103749,0.277064115484183,1.31693286264251,0.919463387397059,1.65261864797256,0,1.25572744982203,0.213557388818567,1.05965950579781,0.600182192168805,0.92747276314595,1.8034837803194,1.30281799432113,0.675105328965065,0.584622030967192,1.7670364197088,0.920498986422993,2.7479829659198,2.4850671476163,0.806016785821122,0.339121184620975,0.386521706326594,0.272746120590835,0,0.731842236777572,1.19276791489337,1.16193942869518,2.28054321033815,1.00928340350251,0,1.56449532329816,0,1.38134921352481,0.928735856063958,0.721879481669586,0.236613600079688,0,0.241011029883482,0,0,0,0.269662616320329,0.196221465125346,0.38474715694639,0.738155454624648,0,0.4115740113314,0,1.26755034821831,0,0.590789906681404,4.85609409356116,0.614942192715568,0.343135620597051,0,4.49607013030478,0.502644862058154,0.833296006426766,0.651616610620649,1.03993478527958,0,1.39116485970092,0.352226082707465,0.288732895522148,0.462985512576611,0.190254152234598,0.790204397959275,0.858486162094873,2.46217006087397,0.468008530278475,1.78357394746474,0,0.503946384596579,0.141775097242386,0.626909658919938,0,0,5.91195885475132,4.13827639862162,3.7319060797339,6.62951785718023,4.54472760334968,2.85740524314761,1.90994212779139,7.03304683260282,0,0.822619941626588,0.901029173531752,1.71495859578347,0.224262168690721,0.87192013766656,0.36669142910475,0.129271715757778,0,0,0.797814349754612,0,0.514414748524284,0,0.532844358032199,0.428933980974443,0,0.823240336780769,0,0.355391948742546,0,0,0,0.099972991182057,1.2162378064119,2.00902836572851,2.10833939483032,1.4377491329495,1.14861935834114,1.42636905040718,0.723906533337896,0.821905290201534,1.07436577943937,2.69004345584465,8.07826116827902,5.82194452120697,5.77543663258868,2.03275699377971,1.30139853857622,1.54657762555539,2.17771144934653,2.55175500661265,0,0,0.828831026872071,1.47229790062968,1.00034104211935,0.813795071099207,0.623912584592421,0.713715955188647,0.788512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| |||
|short_description=p1@SLC9B1 | |||
}} |
Latest revision as of 05:23, 20 September 2015
Short description: | p1@SLC9B1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC9B1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000394789, ENST00000452285, ENST00000503584, ENST00000504216, ENST00000510559, ENST00000514972, uc003hwu.2, uc003hwv.2, uc003hww.2, uc010ilm.2, uc011cev.1_5end |
EntrezGene: | SLC9B1 |
HGNC: | 24244 |
UniProt: | E7EVG3D6RA80D6RGI9D6RFK4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 1.85e-19 | 56 |
neural rod | 1.85e-19 | 56 |
future spinal cord | 1.85e-19 | 56 |
neural keel | 1.85e-19 | 56 |
adult organism | 5.25e-18 | 114 |
regional part of nervous system | 7.41e-18 | 53 |
regional part of brain | 7.41e-18 | 53 |
regional part of forebrain | 4.29e-16 | 41 |
forebrain | 4.29e-16 | 41 |
anterior neural tube | 4.29e-16 | 41 |
future forebrain | 4.29e-16 | 41 |
nervous system | 1.25e-15 | 89 |
central nervous system | 3.13e-15 | 81 |
hematopoietic system | 2.38e-13 | 98 |
blood island | 2.38e-13 | 98 |
neurectoderm | 2.54e-13 | 86 |
brain | 3.92e-13 | 68 |
future brain | 3.92e-13 | 68 |
brain grey matter | 1.86e-12 | 34 |
gray matter | 1.86e-12 | 34 |
telencephalon | 2.43e-12 | 34 |
neural plate | 4.41e-12 | 82 |
presumptive neural plate | 4.41e-12 | 82 |
regional part of telencephalon | 2.06e-11 | 32 |
hemolymphoid system | 3.08e-11 | 108 |
cerebral hemisphere | 3.12e-11 | 32 |
pre-chordal neural plate | 3.15e-09 | 61 |
regional part of cerebral cortex | 1.30e-08 | 22 |
ecto-epithelium | 3.00e-08 | 104 |
cerebral cortex | 3.08e-08 | 25 |
pallium | 3.08e-08 | 25 |
neocortex | 8.33e-08 | 20 |
bone marrow | 8.35e-08 | 76 |
immune system | 1.74e-07 | 93 |
bone element | 4.82e-07 | 82 |