FFCP PHASE1:Mm9::chr15:100701058..100701098,+: Difference between revisions
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{{FFCP|EntrezGene=20273|HGNC=|MCL_coexpression_id=1|UniProt=Q9WTU3|association_with_transcript=-15bp_to_NM_001077499,uc007xsg.1,uc007xsh.1_5end|description=CAGE_peak_2_at_Scn8a_5end|id=chr15:100701058..100701098,+|ontology_enrichment_celltype=CL:0000540!1.21e-09!33;CL:0000047!1.21e-09!33;CL:0000031!1.21e-09!33;CL:0000404!1.21e-09!33;CL:0000221!1.19e-08!44;CL:0000133!1.19e-08!44;CL:0002319!3.15e-08!43;CL:0000117!4.71e-07!23;CL:0000337!4.71e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,9.10e-09,23;CL:0000337,9.10e-09,23;CL:0000540,1.79e-07,33;CL:0000047,1.79e-07,33;CL:0000031,1.79e-07,33;CL:0000404,1.79e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!3.79e-29!71;UBERON:0003075!3.79e-29!71;UBERON:0007284!3.79e-29!71;UBERON:0000073!2.87e-28!75;UBERON:0001016!2.87e-28!75;UBERON:0004121!4.26e-28!102;UBERON:0000924!4.26e-28!102;UBERON:0006601!4.26e-28!102;UBERON:0001017!1.52e-27!73;UBERON:0005743!1.52e-27!73;UBERON:0000033!2.06e-25!63;UBERON:0001049!8.44e-25!52;UBERON:0005068!8.44e-25!52;UBERON:0006241!8.44e-25!52;UBERON:0007135!8.44e-25!52;UBERON:0000955!1.24e-23!50;UBERON:0006238!1.24e-23!50;UBERON:0002616!6.43e-23!49;UBERON:0003056!2.64e-19!49;UBERON:0003080!4.33e-17!40;UBERON:0002780!2.15e-16!39;UBERON:0001890!2.15e-16!39;UBERON:0006240!2.15e-16!39;UBERON:0002020!9.76e-15!34;UBERON:0007811!9.54e-14!86;UBERON:0000153!7.03e-12!94;UBERON:0002791!7.90e-12!29;UBERON:0003528!7.90e-12!29;UBERON:0001893!7.90e-12!29;UBERON:0002021!7.18e-09!10;UBERON:0000411!7.18e-09!10;UBERON:0001950!7.18e-09!10;UBERON:0003076!2.06e-08!12;UBERON:0003057!2.06e-08!12;UBERON:0000956!1.10e-07!21;UBERON:0001869!1.10e-07!21;UBERON:0000203!1.10e-07!21;UBERON:0002619!4.80e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.58e-42,54;UBERON:0001049,9.70e-39,52;UBERON:0005068,9.70e-39,52;UBERON:0006241,9.70e-39,52;UBERON:0007135,9.70e-39,52;UBERON:0001016,3.42e-37,75;UBERON:0001017,1.48e-36,73;UBERON:0002346,1.19e-35,64;UBERON:0003075,1.19e-35,64;UBERON:0007284,1.19e-35,64;UBERON:0004121,4.35e-32,95;UBERON:0000924,4.35e-32,95;UBERON:0006601,4.35e-32,95;UBERON:0000955,2.73e-31,47;UBERON:0006238,2.73e-31,47;UBERON:0010371,4.16e-30,73;UBERON:0002616,8.76e-30,46;UBERON:0002020,2.52e-27,34;UBERON:0003080,9.02e-25,40;UBERON:0003056,3.20e-24,49;UBERON:0002780,2.77e-23,39;UBERON:0001890,2.77e-23,39;UBERON:0006240,2.77e-23,39;UBERON:0010314,5.75e-22,92;UBERON:0003528,1.54e-20,29;UBERON:0002791,1.54e-20,29;UBERON:0001893,1.54e-20,29;UBERON:0002021,1.37e-19,10;UBERON:0000411,1.37e-19,10;UBERON:0001950,1.37e-19,10;UBERON:0002619,2.78e-15,17;UBERON:0003076,1.72e-14,12;UBERON:0003057,1.72e-14,12;UBERON:0000956,4.06e-14,21;UBERON:0001869,4.06e-14,21;UBERON:0000203,4.06e-14,21;UBERON:0000025,7.08e-13,114;UBERON:0004111,1.82e-11,122;UBERON:0002240,1.98e-10,6;UBERON:0005174,1.98e-10,6;UBERON:0001137,1.98e-10,6;UBERON:0011216,5.18e-09,194;UBERON:0001948,1.94e-08,5;UBERON:0002315,1.94e-08,5;UBERON:0002950,6.86e-08,4;UBERON:0001891,6.86e-08,4;UBERON:0009616,6.86e-08,4;UBERON:0010286,6.86e-08,4;UBERON:0002420,1.22e-07,8;UBERON:0007245,1.22e-07,8;UBERON:0010009,1.22e-07,8;UBERON:0010011,1.22e-07,8;UBERON:0000454,1.22e-07,8;UBERON:0000483,2.70e-07,174;UBERON:0000119,4.12e-07,176|phase1_expression=0.960893082628764,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57181818634493,0,0,0,0,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0,0,0,0,0,0,0,0,0.384218305321555,0.414758449233911,0,0.630974884054146,2.85650984403804,1.54607978666129,0.122490799214954,0.383381884072945,0,7.70811166995721,11.2364857514965,8.60196586234964,0.395658863190582,0.548925861614458,1.04182674111352,8.09630697104005,3.93933827022176,5.04234217663473,1.17851434189467,1.56608848879013,1.67759501242771,0.227178579999552,1.058001841495,0,0,0,0,0,0,0.140444420131752,0,0,0,0.985903938436763,0,0,0,0,0,0,0.22836775943812,0,0.593768556259299,0.346970653532272,0.304465478312141,0.230615497256059,0.301445281105245,0.352766121407114,0.125666591329675,0,0,0,0,0.220841518460394,0,0,9.9545470983926,12.1479089951804,0,0,0,0,8.38827580667007,10.0650132620098,1.50785222535437,14.2535942557667,15.3429274398198,7.89594569326328,12.8170597823529,0,0,0,0.210441855886474,0.260240885925407,0.459804208866946,0,0.452114453507145,0.816437989815934,1.0249097622788,1.12442069471675,2.06962696591213,0.431135985865684,0,0.351902248327898,0,0,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,12.4071069652835,2.16099685996497,0,0,0,0.232236671860439,0.38660238396628,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0.189667900953082,0.342745537829186,0,0.610953983535943,0.193952487167626,0.350679099451593,0.505892296994058,0,0.156998727841375,0,0,0,0.393117990226406,0,0,0,0,0,0.162135226775035,0,0,0,0,0.252578877947112,0,0,0,0.568474235311454,0.325929952884052,0.169745085775188,0,0.335012514883631,0,0.585400943573396,0.1576351441061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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20273 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q9WTU3 | |||
|association_with_transcript=-15bp_to_NM_001077499,uc007xsg.1,uc007xsh.1_5end | |||
|cluster_id=chr15:100701058..100701098,+ | |||
|description=CAGE_peak_2_at_Scn8a_5end | |||
|id=chr15:100701058..100701098,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.21e-09!33;CL:0000047!1.21e-09!33;CL:0000031!1.21e-09!33;CL:0000404!1.21e-09!33;CL:0000221!1.19e-08!44;CL:0000133!1.19e-08!44;CL:0002319!3.15e-08!43;CL:0000117!4.71e-07!23;CL:0000337!4.71e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.10e-09,23;CL:0000337,9.10e-09,23;CL:0000540,1.79e-07,33;CL:0000047,1.79e-07,33;CL:0000031,1.79e-07,33;CL:0000404,1.79e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!3.79e-29!71;UBERON:0003075!3.79e-29!71;UBERON:0007284!3.79e-29!71;UBERON:0000073!2.87e-28!75;UBERON:0001016!2.87e-28!75;UBERON:0004121!4.26e-28!102;UBERON:0000924!4.26e-28!102;UBERON:0006601!4.26e-28!102;UBERON:0001017!1.52e-27!73;UBERON:0005743!1.52e-27!73;UBERON:0000033!2.06e-25!63;UBERON:0001049!8.44e-25!52;UBERON:0005068!8.44e-25!52;UBERON:0006241!8.44e-25!52;UBERON:0007135!8.44e-25!52;UBERON:0000955!1.24e-23!50;UBERON:0006238!1.24e-23!50;UBERON:0002616!6.43e-23!49;UBERON:0003056!2.64e-19!49;UBERON:0003080!4.33e-17!40;UBERON:0002780!2.15e-16!39;UBERON:0001890!2.15e-16!39;UBERON:0006240!2.15e-16!39;UBERON:0002020!9.76e-15!34;UBERON:0007811!9.54e-14!86;UBERON:0000153!7.03e-12!94;UBERON:0002791!7.90e-12!29;UBERON:0003528!7.90e-12!29;UBERON:0001893!7.90e-12!29;UBERON:0002021!7.18e-09!10;UBERON:0000411!7.18e-09!10;UBERON:0001950!7.18e-09!10;UBERON:0003076!2.06e-08!12;UBERON:0003057!2.06e-08!12;UBERON:0000956!1.10e-07!21;UBERON:0001869!1.10e-07!21;UBERON:0000203!1.10e-07!21;UBERON:0002619!4.80e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.58e-42,54;UBERON:0001049,9.70e-39,52;UBERON:0005068,9.70e-39,52;UBERON:0006241,9.70e-39,52;UBERON:0007135,9.70e-39,52;UBERON:0001016,3.42e-37,75;UBERON:0001017,1.48e-36,73;UBERON:0002346,1.19e-35,64;UBERON:0003075,1.19e-35,64;UBERON:0007284,1.19e-35,64;UBERON:0004121,4.35e-32,95;UBERON:0000924,4.35e-32,95;UBERON:0006601,4.35e-32,95;UBERON:0000955,2.73e-31,47;UBERON:0006238,2.73e-31,47;UBERON:0010371,4.16e-30,73;UBERON:0002616,8.76e-30,46;UBERON:0002020,2.52e-27,34;UBERON:0003080,9.02e-25,40;UBERON:0003056,3.20e-24,49;UBERON:0002780,2.77e-23,39;UBERON:0001890,2.77e-23,39;UBERON:0006240,2.77e-23,39;UBERON:0010314,5.75e-22,92;UBERON:0003528,1.54e-20,29;UBERON:0002791,1.54e-20,29;UBERON:0001893,1.54e-20,29;UBERON:0002021,1.37e-19,10;UBERON:0000411,1.37e-19,10;UBERON:0001950,1.37e-19,10;UBERON:0002619,2.78e-15,17;UBERON:0003076,1.72e-14,12;UBERON:0003057,1.72e-14,12;UBERON:0000956,4.06e-14,21;UBERON:0001869,4.06e-14,21;UBERON:0000203,4.06e-14,21;UBERON:0000025,7.08e-13,114;UBERON:0004111,1.82e-11,122;UBERON:0002240,1.98e-10,6;UBERON:0005174,1.98e-10,6;UBERON:0001137,1.98e-10,6;UBERON:0011216,5.18e-09,194;UBERON:0001948,1.94e-08,5;UBERON:0002315,1.94e-08,5;UBERON:0002950,6.86e-08,4;UBERON:0001891,6.86e-08,4;UBERON:0009616,6.86e-08,4;UBERON:0010286,6.86e-08,4;UBERON:0002420,1.22e-07,8;UBERON:0007245,1.22e-07,8;UBERON:0010009,1.22e-07,8;UBERON:0010011,1.22e-07,8;UBERON:0000454,1.22e-07,8;UBERON:0000483,2.70e-07,174;UBERON:0000119,4.12e-07,176 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57181818634493,0,0,0,0,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0,0,0,0,0,0,0,0,0.384218305321555,0.414758449233911,0,0.630974884054146,2.85650984403804,1.54607978666129,0.122490799214954,0.383381884072945,0,7.70811166995721,11.2364857514965,8.60196586234964,0.395658863190582,0.548925861614458,1.04182674111352,8.09630697104005,3.93933827022176,5.04234217663473,1.17851434189467,1.56608848879013,1.67759501242771,0.227178579999552,1.058001841495,0,0,0,0,0,0,0.140444420131752,0,0,0,0.985903938436763,0,0,0,0,0,0,0.22836775943812,0,0.593768556259299,0.346970653532272,0.304465478312141,0.230615497256059,0.301445281105245,0.352766121407114,0.125666591329675,0,0,0,0,0.220841518460394,0,0,9.9545470983926,12.1479089951804,0,0,0,0,8.38827580667007,10.0650132620098,1.50785222535437,14.2535942557667,15.3429274398198,7.89594569326328,12.8170597823529,0,0,0,0.210441855886474,0.260240885925407,0.459804208866946,0,0.452114453507145,0.816437989815934,1.0249097622788,1.12442069471675,2.06962696591213,0.431135985865684,0,0.351902248327898,0,0,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,12.4071069652835,2.16099685996497,0,0,0,0.232236671860439,0.38660238396628,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0.189667900953082,0.342745537829186,0,0.610953983535943,0.193952487167626,0.350679099451593,0.505892296994058,0,0.156998727841375,0,0,0,0.393117990226406,0,0,0,0,0,0.162135226775035,0,0,0,0,0.252578877947112,0,0,0,0.568474235311454,0.325929952884052,0.169745085775188,0,0.335012514883631,0,0.585400943573396,0.157635144106191,0.664394068946325,0.159454768657487,0,0,0.144649058581512,0,0,0,0,15.7339578188036,13.4793439581034,0,0,0.315508219416257,0.390438744296638,0.215423397732799,0.716906393857656,1.11399337041197,1.98153571552183,0.809621403349789,0.876767573733936,0,7.71171159412337,0,0.178065603667255,0.488660878060728,0,0,0,0.302323556964751,0,0,0.307435147943927,0.516856586336442,0,0,0.632073515871632,0,0,2.04263763452273,1.08036656418786,0.517434735131018,0.214337035031592,1.06404140185364,0.535106452806212,0.493647061806363,0.608929898229199,0,0,0,0,0,0.241251699712623,0.119372344003136,0,0.291480836629851,17.8008289930089,0,0.206386867963223,1.11116716421827,0.188368457004691,0,0,0,0,0,0,0.158167996790568,0,0.216010681643603,0,0,0,0,0,0,0,0,0.299033092087958,0.165458490457098,0.194451188344048,0,0,0.234714477291508,0,0.104859344425711,0.966336483304024,0,0,0.202725215290164,0.102710957164827,0,0,0,0.120195449519969,0,0.100966449948148,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0.183151624267265,0,0,11.8597886949584,7.82552902062201,8.02053718815155,11.6860163993708,15.7568979547248,17.3740596399631,11.4753825039407,12.6089936902782,11.7817026335893,10.3552062350364,0.103787347584177,0.399024873401031,0.341467211508268,0,0,0.367687016900028,0.888986911206461,0.412070114477788,0.962757628775446,0.252697211763798,0.25347929989024,0.377252682772152,0.187283014939765,0.128050304809739,0.574354689556133,0.476293691283074,0.579421629724277,0.38581844092741,0,0.441596760403192,0.342869252385415,0,0.238436189947321,0,0.376437521661322,0.338458431566706,0.548783918618318,0.263069711437843,0.543216455383447,0,0.355905054372522,0.197008964751127,0,0.464810523557898,0.192906610981141,1.24905288968973,0.233931608445408,0.214871054048298,0.57386499620653,0.220591419119515,0.231867835620421 | |||
|short_description=p2@Scn8a | |||
}} |
Latest revision as of 12:35, 26 September 2015
Short description: | p2@Scn8a |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Scn8a_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -15bp_to_NM_001077499, uc007xsg.1, uc007xsh.1_5end |
EntrezGene: | Scn8a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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CNS neuron (sensu Vertebrata) | 9.10e-09 | 23 |
neuroblast (sensu Vertebrata) | 9.10e-09 | 23 |
neuron | 1.79e-07 | 33 |
neuronal stem cell | 1.79e-07 | 33 |
neuroblast | 1.79e-07 | 33 |
electrically signaling cell | 1.79e-07 | 33 |